Protein–RNA interactions for Protein: P56842

Tcl1b3, Protein TCL1B3, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcl1b3P56842 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tcl1b3P56842 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Tcl1b3P56842 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tcl1b3P56842 Gm25239-201ENSMUST00000174915 86 ntBASIC21.63■■□□□ 1.05
Tcl1b3P56842 Psd-208ENSMUST00000224556 2034 ntBASIC21.43■■□□□ 1.02
Tcl1b3P56842 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tcl1b3P56842 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tcl1b3P56842 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tcl1b3P56842 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tcl1b3P56842 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tcl1b3P56842 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tcl1b3P56842 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tcl1b3P56842 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tcl1b3P56842 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcl1b3P56842 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tcl1b3P56842 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tcl1b3P56842 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.07■□□□□ 0.8
Tcl1b3P56842 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tcl1b3P56842 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tcl1b3P56842 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tcl1b3P56842 Gm15042-201ENSMUST00000120212 883 ntBASIC19.78■□□□□ 0.76
Tcl1b3P56842 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Tcl1b3P56842 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcl1b3P56842 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tcl1b3P56842 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.56■□□□□ 0.72
Tcl1b3P56842 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tcl1b3P56842 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tcl1b3P56842 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.46■□□□□ 0.71
Tcl1b3P56842 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.44■□□□□ 0.7
Tcl1b3P56842 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.43■□□□□ 0.7
Tcl1b3P56842 Gm15045-201ENSMUST00000117359 883 ntBASIC19.42■□□□□ 0.7
Tcl1b3P56842 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tcl1b3P56842 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcl1b3P56842 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcl1b3P56842 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.3■□□□□ 0.68
Tcl1b3P56842 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcl1b3P56842 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcl1b3P56842 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcl1b3P56842 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcl1b3P56842 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tcl1b3P56842 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.22■□□□□ 0.67
Tcl1b3P56842 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcl1b3P56842 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tcl1b3P56842 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcl1b3P56842 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.13■□□□□ 0.65
Tcl1b3P56842 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tcl1b3P56842 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Tcl1b3P56842 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tcl1b3P56842 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Tcl1b3P56842 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tcl1b3P56842 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tcl1b3P56842 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tcl1b3P56842 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tcl1b3P56842 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tcl1b3P56842 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tcl1b3P56842 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcl1b3P56842 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tcl1b3P56842 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tcl1b3P56842 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcl1b3P56842 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tcl1b3P56842 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tcl1b3P56842 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tcl1b3P56842 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.69■□□□□ 0.58
Tcl1b3P56842 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Tcl1b3P56842 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcl1b3P56842 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcl1b3P56842 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcl1b3P56842 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tcl1b3P56842 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcl1b3P56842 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcl1b3P56842 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tcl1b3P56842 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tcl1b3P56842 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tcl1b3P56842 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tcl1b3P56842 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tcl1b3P56842 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcl1b3P56842 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tcl1b3P56842 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tcl1b3P56842 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tcl1b3P56842 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.35■□□□□ 0.53
Tcl1b3P56842 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tcl1b3P56842 Gm24109-201ENSMUST00000175489 103 ntBASIC18.32■□□□□ 0.52
Tcl1b3P56842 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tcl1b3P56842 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tcl1b3P56842 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcl1b3P56842 Gm23366-201ENSMUST00000175022 89 ntBASIC18.27■□□□□ 0.52
Tcl1b3P56842 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Tcl1b3P56842 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tcl1b3P56842 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tcl1b3P56842 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcl1b3P56842 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcl1b3P56842 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.15■□□□□ 0.5
Tcl1b3P56842 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tcl1b3P56842 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcl1b3P56842 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Tcl1b3P56842 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tcl1b3P56842 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcl1b3P56842 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tcl1b3P56842 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Tcl1b3P56842 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms