Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21,77■■□□□ 1,08
Igkv8-30A0A140T8M3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20,94■□□□□ 0,94
Igkv8-30A0A140T8M3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20,94■□□□□ 0,94
Igkv8-30A0A140T8M3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20,76■□□□□ 0,91
Igkv8-30A0A140T8M3 Psd-208ENSMUST00000224556 2034 ntBASIC20,57■□□□□ 0,88
Igkv8-30A0A140T8M3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20,54■□□□□ 0,88
Igkv8-30A0A140T8M3 Gm25239-201ENSMUST00000174915 86 ntBASIC19,89■□□□□ 0,77
Igkv8-30A0A140T8M3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19,64■□□□□ 0,74
Igkv8-30A0A140T8M3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Igkv8-30A0A140T8M3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19,57■□□□□ 0,72
Igkv8-30A0A140T8M3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19,51■□□□□ 0,71
Igkv8-30A0A140T8M3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19,47■□□□□ 0,71
Igkv8-30A0A140T8M3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19,46■□□□□ 0,71
Igkv8-30A0A140T8M3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19,43■□□□□ 0,7
Igkv8-30A0A140T8M3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19,31■□□□□ 0,68
Igkv8-30A0A140T8M3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19,28■□□□□ 0,68
Igkv8-30A0A140T8M3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19,24■□□□□ 0,67
Igkv8-30A0A140T8M3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19,19■□□□□ 0,66
Igkv8-30A0A140T8M3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19,04■□□□□ 0,64
Igkv8-30A0A140T8M3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18,96■□□□□ 0,63
Igkv8-30A0A140T8M3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18,82■□□□□ 0,6
Igkv8-30A0A140T8M3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18,78■□□□□ 0,6
Igkv8-30A0A140T8M3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18,76■□□□□ 0,59
Igkv8-30A0A140T8M3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18,73■□□□□ 0,59
Igkv8-30A0A140T8M3 Gm42596-201ENSMUST00000196305 1958 ntBASIC18,72■□□□□ 0,59
Igkv8-30A0A140T8M3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18,71■□□□□ 0,59
Igkv8-30A0A140T8M3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18,69■□□□□ 0,58
Igkv8-30A0A140T8M3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18,67■□□□□ 0,58
Igkv8-30A0A140T8M3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18,67■□□□□ 0,58
Igkv8-30A0A140T8M3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18,64■□□□□ 0,57
Igkv8-30A0A140T8M3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18,62■□□□□ 0,57
Igkv8-30A0A140T8M3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18,61■□□□□ 0,57
Igkv8-30A0A140T8M3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18,58■□□□□ 0,56
Igkv8-30A0A140T8M3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18,54■□□□□ 0,56
Igkv8-30A0A140T8M3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18,44■□□□□ 0,54
Igkv8-30A0A140T8M3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18,27■□□□□ 0,51
Igkv8-30A0A140T8M3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18,26■□□□□ 0,51
Igkv8-30A0A140T8M3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18,26■□□□□ 0,51
Igkv8-30A0A140T8M3 Gm10524-201ENSMUST00000181931 1893 ntBASIC18,24■□□□□ 0,51
Igkv8-30A0A140T8M3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18,23■□□□□ 0,51
Igkv8-30A0A140T8M3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18,22■□□□□ 0,51
Igkv8-30A0A140T8M3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18,2■□□□□ 0,5
Igkv8-30A0A140T8M3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18,14■□□□□ 0,49
Igkv8-30A0A140T8M3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18,1■□□□□ 0,49
Igkv8-30A0A140T8M3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18,09■□□□□ 0,49
Igkv8-30A0A140T8M3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18,08■□□□□ 0,48
Igkv8-30A0A140T8M3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18,06■□□□□ 0,48
Igkv8-30A0A140T8M3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18,06■□□□□ 0,48
Igkv8-30A0A140T8M3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18,06■□□□□ 0,48
Igkv8-30A0A140T8M3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18,06■□□□□ 0,48
Igkv8-30A0A140T8M3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18■□□□□ 0,47
Igkv8-30A0A140T8M3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17,98■□□□□ 0,47
Igkv8-30A0A140T8M3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17,97■□□□□ 0,47
Igkv8-30A0A140T8M3 Gm15042-201ENSMUST00000120212 883 ntBASIC17,94■□□□□ 0,46
Igkv8-30A0A140T8M3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC17,93■□□□□ 0,46
Igkv8-30A0A140T8M3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17,87■□□□□ 0,45
Igkv8-30A0A140T8M3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17,85■□□□□ 0,45
Igkv8-30A0A140T8M3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC17,84■□□□□ 0,45
Igkv8-30A0A140T8M3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17,83■□□□□ 0,45
Igkv8-30A0A140T8M3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17,83■□□□□ 0,45
Igkv8-30A0A140T8M3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17,78■□□□□ 0,44
Igkv8-30A0A140T8M3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17,77■□□□□ 0,44
Igkv8-30A0A140T8M3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17,77■□□□□ 0,44
Igkv8-30A0A140T8M3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17,77■□□□□ 0,44
Igkv8-30A0A140T8M3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17,77■□□□□ 0,44
Igkv8-30A0A140T8M3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17,76■□□□□ 0,43
Igkv8-30A0A140T8M3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17,74■□□□□ 0,43
Igkv8-30A0A140T8M3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17,73■□□□□ 0,43
Igkv8-30A0A140T8M3 Gm15045-201ENSMUST00000117359 883 ntBASIC17,7■□□□□ 0,42
Igkv8-30A0A140T8M3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17,7■□□□□ 0,42
Igkv8-30A0A140T8M3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17,68■□□□□ 0,42
Igkv8-30A0A140T8M3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17,67■□□□□ 0,42
Igkv8-30A0A140T8M3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,41
Igkv8-30A0A140T8M3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17,64■□□□□ 0,41
Igkv8-30A0A140T8M3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17,64■□□□□ 0,41
Igkv8-30A0A140T8M3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17,64■□□□□ 0,41
Igkv8-30A0A140T8M3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17,63■□□□□ 0,41
Igkv8-30A0A140T8M3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17,59■□□□□ 0,41
Igkv8-30A0A140T8M3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17,56■□□□□ 0,4
Igkv8-30A0A140T8M3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17,55■□□□□ 0,4
Igkv8-30A0A140T8M3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17,54■□□□□ 0,4
Igkv8-30A0A140T8M3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC17,51■□□□□ 0,39
Igkv8-30A0A140T8M3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17,5■□□□□ 0,39
Igkv8-30A0A140T8M3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17,49■□□□□ 0,39
Igkv8-30A0A140T8M3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17,49■□□□□ 0,39
Igkv8-30A0A140T8M3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17,48■□□□□ 0,39
Igkv8-30A0A140T8M3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17,45■□□□□ 0,38
Igkv8-30A0A140T8M3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17,41■□□□□ 0,38
Igkv8-30A0A140T8M3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17,41■□□□□ 0,38
Igkv8-30A0A140T8M3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17,41■□□□□ 0,38
Igkv8-30A0A140T8M3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17,39■□□□□ 0,37
Igkv8-30A0A140T8M3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17,36■□□□□ 0,37
Igkv8-30A0A140T8M3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17,35■□□□□ 0,37
Igkv8-30A0A140T8M3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17,34■□□□□ 0,37
Igkv8-30A0A140T8M3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17,33■□□□□ 0,37
Igkv8-30A0A140T8M3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17,33■□□□□ 0,36
Igkv8-30A0A140T8M3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17,29■□□□□ 0,36
Igkv8-30A0A140T8M3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17,28■□□□□ 0,36
Igkv8-30A0A140T8M3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17,27■□□□□ 0,35
Igkv8-30A0A140T8M3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17,27■□□□□ 0,35
Retrieved 100 of 76,532 protein–RNA pairs in 33,3 ms