Protein–RNA interactions for Protein: Q8BG41

Psmb11, Proteasome subunit beta type-11, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb11Q8BG41 Gm25239-201ENSMUST00000174915 86 ntBASIC25,83■■□□□ 1,73
Psmb11Q8BG41 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Psmb11Q8BG41 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,92■■□□□ 1,58
Psmb11Q8BG41 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24,9■■□□□ 1,58
Psmb11Q8BG41 Psd-208ENSMUST00000224556 2034 ntBASIC24,11■■□□□ 1,45
Psmb11Q8BG41 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23,71■■□□□ 1,39
Psmb11Q8BG41 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23,55■■□□□ 1,36
Psmb11Q8BG41 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23,46■■□□□ 1,35
Psmb11Q8BG41 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23,4■■□□□ 1,34
Psmb11Q8BG41 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23,32■■□□□ 1,32
Psmb11Q8BG41 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23,29■■□□□ 1,32
Psmb11Q8BG41 Gm15042-201ENSMUST00000120212 883 ntBASIC23,26■■□□□ 1,31
Psmb11Q8BG41 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,12■■□□□ 1,29
Psmb11Q8BG41 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23,11■■□□□ 1,29
Psmb11Q8BG41 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23,05■■□□□ 1,28
Psmb11Q8BG41 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23,04■■□□□ 1,28
Psmb11Q8BG41 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23,03■■□□□ 1,28
Psmb11Q8BG41 Gm15045-201ENSMUST00000117359 883 ntBASIC22,9■■□□□ 1,26
Psmb11Q8BG41 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22,73■■□□□ 1,23
Psmb11Q8BG41 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,22
Psmb11Q8BG41 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22,52■■□□□ 1,2
Psmb11Q8BG41 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22,5■■□□□ 1,19
Psmb11Q8BG41 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22,42■■□□□ 1,18
Psmb11Q8BG41 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22,4■■□□□ 1,18
Psmb11Q8BG41 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,37■■□□□ 1,17
Psmb11Q8BG41 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Psmb11Q8BG41 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,32■■□□□ 1,16
Psmb11Q8BG41 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22,29■■□□□ 1,16
Psmb11Q8BG41 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22,28■■□□□ 1,16
Psmb11Q8BG41 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22,25■■□□□ 1,15
Psmb11Q8BG41 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22,25■■□□□ 1,15
Psmb11Q8BG41 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22,21■■□□□ 1,15
Psmb11Q8BG41 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,17■■□□□ 1,14
Psmb11Q8BG41 Gm24109-201ENSMUST00000175489 103 ntBASIC22,11■■□□□ 1,13
Psmb11Q8BG41 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,11■■□□□ 1,13
Psmb11Q8BG41 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,13
Psmb11Q8BG41 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22,07■■□□□ 1,12
Psmb11Q8BG41 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22,06■■□□□ 1,12
Psmb11Q8BG41 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,91■■□□□ 1,1
Psmb11Q8BG41 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21,89■■□□□ 1,1
Psmb11Q8BG41 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21,89■■□□□ 1,09
Psmb11Q8BG41 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21,82■■□□□ 1,08
Psmb11Q8BG41 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21,78■■□□□ 1,08
Psmb11Q8BG41 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21,71■■□□□ 1,07
Psmb11Q8BG41 Gm23366-201ENSMUST00000175022 89 ntBASIC21,68■■□□□ 1,06
Psmb11Q8BG41 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21,65■■□□□ 1,06
Psmb11Q8BG41 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21,55■■□□□ 1,04
Psmb11Q8BG41 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21,53■■□□□ 1,04
Psmb11Q8BG41 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21,46■■□□□ 1,03
Psmb11Q8BG41 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Psmb11Q8BG41 Gm42596-201ENSMUST00000196305 1958 ntBASIC21,43■■□□□ 1,02
Psmb11Q8BG41 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,39■■□□□ 1,01
Psmb11Q8BG41 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Psmb11Q8BG41 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21,34■■□□□ 1,01
Psmb11Q8BG41 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21,32■■□□□ 1
Psmb11Q8BG41 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Psmb11Q8BG41 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21,31■■□□□ 1
Psmb11Q8BG41 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21,29■■□□□ 1
Psmb11Q8BG41 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Psmb11Q8BG41 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Psmb11Q8BG41 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21,26■□□□□ 0,99
Psmb11Q8BG41 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21,25■□□□□ 0,99
Psmb11Q8BG41 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21,21■□□□□ 0,99
Psmb11Q8BG41 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Psmb11Q8BG41 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21,15■□□□□ 0,98
Psmb11Q8BG41 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21,13■□□□□ 0,97
Psmb11Q8BG41 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Psmb11Q8BG41 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,11■□□□□ 0,97
Psmb11Q8BG41 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21,06■□□□□ 0,96
Psmb11Q8BG41 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21,05■□□□□ 0,96
Psmb11Q8BG41 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21,03■□□□□ 0,96
Psmb11Q8BG41 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21,02■□□□□ 0,96
Psmb11Q8BG41 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21■□□□□ 0,95
Psmb11Q8BG41 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20,95■□□□□ 0,95
Psmb11Q8BG41 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20,92■□□□□ 0,94
Psmb11Q8BG41 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,92
Psmb11Q8BG41 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20,81■□□□□ 0,92
Psmb11Q8BG41 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20,75■□□□□ 0,91
Psmb11Q8BG41 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20,75■□□□□ 0,91
Psmb11Q8BG41 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20,71■□□□□ 0,91
Psmb11Q8BG41 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20,7■□□□□ 0,9
Psmb11Q8BG41 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20,69■□□□□ 0,9
Psmb11Q8BG41 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20,67■□□□□ 0,9
Psmb11Q8BG41 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20,67■□□□□ 0,9
Psmb11Q8BG41 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20,66■□□□□ 0,9
Psmb11Q8BG41 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20,61■□□□□ 0,89
Psmb11Q8BG41 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20,6■□□□□ 0,89
Psmb11Q8BG41 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20,59■□□□□ 0,89
Psmb11Q8BG41 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20,58■□□□□ 0,89
Psmb11Q8BG41 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20,58■□□□□ 0,88
Psmb11Q8BG41 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20,57■□□□□ 0,88
Psmb11Q8BG41 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20,57■□□□□ 0,88
Psmb11Q8BG41 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20,56■□□□□ 0,88
Psmb11Q8BG41 Gm27325-201ENSMUST00000175467 74 ntBASIC20,54■□□□□ 0,88
Psmb11Q8BG41 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20,53■□□□□ 0,88
Psmb11Q8BG41 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20,53■□□□□ 0,88
Psmb11Q8BG41 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20,52■□□□□ 0,88
Psmb11Q8BG41 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20,39■□□□□ 0,86
Psmb11Q8BG41 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20,39■□□□□ 0,86
Psmb11Q8BG41 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20,39■□□□□ 0,86
Retrieved 100 of 76,532 protein–RNA pairs in 22,9 ms