Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm25239-201ENSMUST00000174915 86 ntBASIC26.93■■□□□ 1.9
Trav13n-1A0A0G2JEU8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Trav13n-1A0A0G2JEU8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trav13n-1A0A0G2JEU8 Gm15042-201ENSMUST00000120212 883 ntBASIC23.62■■□□□ 1.37
Trav13n-1A0A0G2JEU8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trav13n-1A0A0G2JEU8 Gm24109-201ENSMUST00000175489 103 ntBASIC23.3■■□□□ 1.32
Trav13n-1A0A0G2JEU8 Gm15045-201ENSMUST00000117359 883 ntBASIC23.04■■□□□ 1.28
Trav13n-1A0A0G2JEU8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trav13n-1A0A0G2JEU8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trav13n-1A0A0G2JEU8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trav13n-1A0A0G2JEU8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Trav13n-1A0A0G2JEU8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Trav13n-1A0A0G2JEU8 Gm23366-201ENSMUST00000175022 89 ntBASIC22.54■■□□□ 1.2
Trav13n-1A0A0G2JEU8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trav13n-1A0A0G2JEU8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav13n-1A0A0G2JEU8 Psd-208ENSMUST00000224556 2034 ntBASIC22.01■■□□□ 1.11
Trav13n-1A0A0G2JEU8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav13n-1A0A0G2JEU8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav13n-1A0A0G2JEU8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.89■■□□□ 1.09
Trav13n-1A0A0G2JEU8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trav13n-1A0A0G2JEU8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Trav13n-1A0A0G2JEU8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav13n-1A0A0G2JEU8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.71■■□□□ 1.07
Trav13n-1A0A0G2JEU8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav13n-1A0A0G2JEU8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.58■■□□□ 1.05
Trav13n-1A0A0G2JEU8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trav13n-1A0A0G2JEU8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav13n-1A0A0G2JEU8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav13n-1A0A0G2JEU8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav13n-1A0A0G2JEU8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Trav13n-1A0A0G2JEU8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav13n-1A0A0G2JEU8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.39■■□□□ 1.01
Trav13n-1A0A0G2JEU8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav13n-1A0A0G2JEU8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav13n-1A0A0G2JEU8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav13n-1A0A0G2JEU8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trav13n-1A0A0G2JEU8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.26■□□□□ 0.99
Trav13n-1A0A0G2JEU8 Gm25238-201ENSMUST00000174914 89 ntBASIC21.2■□□□□ 0.98
Trav13n-1A0A0G2JEU8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav13n-1A0A0G2JEU8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.05■□□□□ 0.96
Trav13n-1A0A0G2JEU8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav13n-1A0A0G2JEU8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav13n-1A0A0G2JEU8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav13n-1A0A0G2JEU8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav13n-1A0A0G2JEU8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav13n-1A0A0G2JEU8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Trav13n-1A0A0G2JEU8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.77■□□□□ 0.92
Trav13n-1A0A0G2JEU8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav13n-1A0A0G2JEU8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trav13n-1A0A0G2JEU8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.69■□□□□ 0.9
Trav13n-1A0A0G2JEU8 Gm27325-201ENSMUST00000175467 74 ntBASIC20.66■□□□□ 0.9
Trav13n-1A0A0G2JEU8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav13n-1A0A0G2JEU8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav13n-1A0A0G2JEU8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav13n-1A0A0G2JEU8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.59■□□□□ 0.89
Trav13n-1A0A0G2JEU8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.54■□□□□ 0.88
Trav13n-1A0A0G2JEU8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav13n-1A0A0G2JEU8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Trav13n-1A0A0G2JEU8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav13n-1A0A0G2JEU8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Trav13n-1A0A0G2JEU8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.48■□□□□ 0.87
Trav13n-1A0A0G2JEU8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.44■□□□□ 0.86
Trav13n-1A0A0G2JEU8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav13n-1A0A0G2JEU8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav13n-1A0A0G2JEU8 Gm25262-201ENSMUST00000174934 133 ntBASIC20.35■□□□□ 0.85
Trav13n-1A0A0G2JEU8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav13n-1A0A0G2JEU8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav13n-1A0A0G2JEU8 Rab21-202ENSMUST00000218831 843 ntBASIC20.29■□□□□ 0.84
Trav13n-1A0A0G2JEU8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav13n-1A0A0G2JEU8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.23■□□□□ 0.83
Trav13n-1A0A0G2JEU8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Trav13n-1A0A0G2JEU8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav13n-1A0A0G2JEU8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav13n-1A0A0G2JEU8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trav13n-1A0A0G2JEU8 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.13■□□□□ 0.81
Trav13n-1A0A0G2JEU8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav13n-1A0A0G2JEU8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav13n-1A0A0G2JEU8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav13n-1A0A0G2JEU8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav13n-1A0A0G2JEU8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.08■□□□□ 0.8
Trav13n-1A0A0G2JEU8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav13n-1A0A0G2JEU8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav13n-1A0A0G2JEU8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav13n-1A0A0G2JEU8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav13n-1A0A0G2JEU8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav13n-1A0A0G2JEU8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.98■□□□□ 0.79
Trav13n-1A0A0G2JEU8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav13n-1A0A0G2JEU8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.97■□□□□ 0.79
Trav13n-1A0A0G2JEU8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Trav13n-1A0A0G2JEU8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.95■□□□□ 0.78
Trav13n-1A0A0G2JEU8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav13n-1A0A0G2JEU8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.92■□□□□ 0.78
Trav13n-1A0A0G2JEU8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.92■□□□□ 0.78
Trav13n-1A0A0G2JEU8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trav13n-1A0A0G2JEU8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13n-1A0A0G2JEU8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13n-1A0A0G2JEU8 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.84■□□□□ 0.77
Trav13n-1A0A0G2JEU8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.83■□□□□ 0.77
Trav13n-1A0A0G2JEU8 Gm26115-201ENSMUST00000175605 87 ntBASIC19.82■□□□□ 0.76
Trav13n-1A0A0G2JEU8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms