Protein–RNA interactions for Protein: Q8R3A2

Cdpf1, Cysteine-rich DPF motif domain-containing protein 1, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdpf1Q8R3A2 Gm25239-201ENSMUST00000174915 86 ntBASIC32,78■■■□□ 2,84
Cdpf1Q8R3A2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30,51■■■□□ 2,47
Cdpf1Q8R3A2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30,05■■■□□ 2,4
Cdpf1Q8R3A2 Gm24109-201ENSMUST00000175489 103 ntBASIC28,61■■■□□ 2,17
Cdpf1Q8R3A2 Gm15042-201ENSMUST00000120212 883 ntBASIC28,31■■■□□ 2,12
Cdpf1Q8R3A2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27,75■■■□□ 2,03
Cdpf1Q8R3A2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27,71■■■□□ 2,03
Cdpf1Q8R3A2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27,65■■■□□ 2,02
Cdpf1Q8R3A2 Gm15045-201ENSMUST00000117359 883 ntBASIC27,59■■■□□ 2,01
Cdpf1Q8R3A2 Gm23366-201ENSMUST00000175022 89 ntBASIC27,36■■□□□ 1,97
Cdpf1Q8R3A2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27,23■■□□□ 1,95
Cdpf1Q8R3A2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26,81■■□□□ 1,88
Cdpf1Q8R3A2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26,58■■□□□ 1,85
Cdpf1Q8R3A2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26,5■■□□□ 1,83
Cdpf1Q8R3A2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Cdpf1Q8R3A2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Cdpf1Q8R3A2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Cdpf1Q8R3A2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26,23■■□□□ 1,79
Cdpf1Q8R3A2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Cdpf1Q8R3A2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26,05■■□□□ 1,76
Cdpf1Q8R3A2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Cdpf1Q8R3A2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Cdpf1Q8R3A2 Gm25238-201ENSMUST00000174914 89 ntBASIC25,98■■□□□ 1,75
Cdpf1Q8R3A2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Cdpf1Q8R3A2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25,64■■□□□ 1,69
Cdpf1Q8R3A2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25,48■■□□□ 1,67
Cdpf1Q8R3A2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Cdpf1Q8R3A2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25,41■■□□□ 1,66
Cdpf1Q8R3A2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Cdpf1Q8R3A2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25,29■■□□□ 1,64
Cdpf1Q8R3A2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25,27■■□□□ 1,64
Cdpf1Q8R3A2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25,27■■□□□ 1,64
Cdpf1Q8R3A2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25,14■■□□□ 1,62
Cdpf1Q8R3A2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25,13■■□□□ 1,61
Cdpf1Q8R3A2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25,13■■□□□ 1,61
Cdpf1Q8R3A2 Gm25262-201ENSMUST00000174934 133 ntBASIC25,11■■□□□ 1,61
Cdpf1Q8R3A2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25,1■■□□□ 1,61
Cdpf1Q8R3A2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25,05■■□□□ 1,6
Cdpf1Q8R3A2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24,99■■□□□ 1,59
Cdpf1Q8R3A2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24,88■■□□□ 1,57
Cdpf1Q8R3A2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24,88■■□□□ 1,57
Cdpf1Q8R3A2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24,76■■□□□ 1,55
Cdpf1Q8R3A2 Gm27325-201ENSMUST00000175467 74 ntBASIC24,73■■□□□ 1,55
Cdpf1Q8R3A2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24,7■■□□□ 1,54
Cdpf1Q8R3A2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Cdpf1Q8R3A2 Gm26115-201ENSMUST00000175605 87 ntBASIC24,65■■□□□ 1,54
Cdpf1Q8R3A2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,54
Cdpf1Q8R3A2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24,61■■□□□ 1,53
Cdpf1Q8R3A2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24,57■■□□□ 1,52
Cdpf1Q8R3A2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Cdpf1Q8R3A2 Rab21-202ENSMUST00000218831 843 ntBASIC24,54■■□□□ 1,52
Cdpf1Q8R3A2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24,52■■□□□ 1,52
Cdpf1Q8R3A2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24,45■■□□□ 1,5
Cdpf1Q8R3A2 Gm8109-201ENSMUST00000194076 746 ntBASIC24,44■■□□□ 1,5
Cdpf1Q8R3A2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24,43■■□□□ 1,5
Cdpf1Q8R3A2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24,4■■□□□ 1,5
Cdpf1Q8R3A2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Cdpf1Q8R3A2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24,37■■□□□ 1,49
Cdpf1Q8R3A2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24,34■■□□□ 1,49
Cdpf1Q8R3A2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Cdpf1Q8R3A2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24,29■■□□□ 1,48
Cdpf1Q8R3A2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24,27■■□□□ 1,48
Cdpf1Q8R3A2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24,17■■□□□ 1,46
Cdpf1Q8R3A2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24,17■■□□□ 1,46
Cdpf1Q8R3A2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24,14■■□□□ 1,45
Cdpf1Q8R3A2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24,09■■□□□ 1,45
Cdpf1Q8R3A2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,08■■□□□ 1,44
Cdpf1Q8R3A2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24,01■■□□□ 1,43
Cdpf1Q8R3A2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23,96■■□□□ 1,43
Cdpf1Q8R3A2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,89■■□□□ 1,42
Cdpf1Q8R3A2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23,88■■□□□ 1,41
Cdpf1Q8R3A2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23,87■■□□□ 1,41
Cdpf1Q8R3A2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23,86■■□□□ 1,41
Cdpf1Q8R3A2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23,84■■□□□ 1,41
Cdpf1Q8R3A2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23,81■■□□□ 1,4
Cdpf1Q8R3A2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23,81■■□□□ 1,4
Cdpf1Q8R3A2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23,81■■□□□ 1,4
Cdpf1Q8R3A2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23,81■■□□□ 1,4
Cdpf1Q8R3A2 Psd-208ENSMUST00000224556 2034 ntBASIC23,77■■□□□ 1,4
Cdpf1Q8R3A2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23,76■■□□□ 1,39
Cdpf1Q8R3A2 Gm17082-201ENSMUST00000166043 1091 ntBASIC23,73■■□□□ 1,39
Cdpf1Q8R3A2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23,71■■□□□ 1,39
Cdpf1Q8R3A2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23,66■■□□□ 1,38
Cdpf1Q8R3A2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23,65■■□□□ 1,38
Cdpf1Q8R3A2 Gm24804-201ENSMUST00000174982 85 ntBASIC23,59■■□□□ 1,37
Cdpf1Q8R3A2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23,58■■□□□ 1,37
Cdpf1Q8R3A2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23,54■■□□□ 1,36
Cdpf1Q8R3A2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23,54■■□□□ 1,36
Cdpf1Q8R3A2 Gm27322-201ENSMUST00000184007 104 ntBASIC23,53■■□□□ 1,36
Cdpf1Q8R3A2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23,51■■□□□ 1,35
Cdpf1Q8R3A2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23,48■■□□□ 1,35
Cdpf1Q8R3A2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23,45■■□□□ 1,34
Cdpf1Q8R3A2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23,43■■□□□ 1,34
Cdpf1Q8R3A2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,41■■□□□ 1,34
Cdpf1Q8R3A2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23,41■■□□□ 1,34
Cdpf1Q8R3A2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23,39■■□□□ 1,34
Cdpf1Q8R3A2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23,39■■□□□ 1,33
Cdpf1Q8R3A2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23,38■■□□□ 1,33
Cdpf1Q8R3A2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23,33■■□□□ 1,33
Cdpf1Q8R3A2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23,31■■□□□ 1,32
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms