Protein–RNA interactions for Protein: A0A0A6YXZ4

Ighv1-62-2, Immunoglobulin heavy variable 1-62-2 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-62-2A0A0A6YXZ4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ighv1-62-2A0A0A6YXZ4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ighv1-62-2A0A0A6YXZ4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ighv1-62-2A0A0A6YXZ4 Psd-208ENSMUST00000224556 2034 ntBASIC22.89■■□□□ 1.25
Ighv1-62-2A0A0A6YXZ4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Ighv1-62-2A0A0A6YXZ4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ighv1-62-2A0A0A6YXZ4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ighv1-62-2A0A0A6YXZ4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv1-62-2A0A0A6YXZ4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Ighv1-62-2A0A0A6YXZ4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ighv1-62-2A0A0A6YXZ4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ighv1-62-2A0A0A6YXZ4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-62-2A0A0A6YXZ4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ighv1-62-2A0A0A6YXZ4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ighv1-62-2A0A0A6YXZ4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ighv1-62-2A0A0A6YXZ4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ighv1-62-2A0A0A6YXZ4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ighv1-62-2A0A0A6YXZ4 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.62■■□□□ 1.05
Ighv1-62-2A0A0A6YXZ4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Ighv1-62-2A0A0A6YXZ4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ighv1-62-2A0A0A6YXZ4 Gm25239-201ENSMUST00000174915 86 ntBASIC21.37■■□□□ 1.01
Ighv1-62-2A0A0A6YXZ4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv1-62-2A0A0A6YXZ4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ighv1-62-2A0A0A6YXZ4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ighv1-62-2A0A0A6YXZ4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ighv1-62-2A0A0A6YXZ4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-62-2A0A0A6YXZ4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv1-62-2A0A0A6YXZ4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ighv1-62-2A0A0A6YXZ4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ighv1-62-2A0A0A6YXZ4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv1-62-2A0A0A6YXZ4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.15■□□□□ 0.98
Ighv1-62-2A0A0A6YXZ4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Ighv1-62-2A0A0A6YXZ4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-62-2A0A0A6YXZ4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-62-2A0A0A6YXZ4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.81■□□□□ 0.92
Ighv1-62-2A0A0A6YXZ4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-62-2A0A0A6YXZ4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.72■□□□□ 0.91
Ighv1-62-2A0A0A6YXZ4 Zxda-201ENSMUST00000117281 2621 ntBASIC20.69■□□□□ 0.9
Ighv1-62-2A0A0A6YXZ4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv1-62-2A0A0A6YXZ4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv1-62-2A0A0A6YXZ4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv1-62-2A0A0A6YXZ4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ighv1-62-2A0A0A6YXZ4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-62-2A0A0A6YXZ4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ighv1-62-2A0A0A6YXZ4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-62-2A0A0A6YXZ4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-62-2A0A0A6YXZ4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-62-2A0A0A6YXZ4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-62-2A0A0A6YXZ4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-62-2A0A0A6YXZ4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ighv1-62-2A0A0A6YXZ4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ighv1-62-2A0A0A6YXZ4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ighv1-62-2A0A0A6YXZ4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.27■□□□□ 0.84
Ighv1-62-2A0A0A6YXZ4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-62-2A0A0A6YXZ4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.22■□□□□ 0.83
Ighv1-62-2A0A0A6YXZ4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-62-2A0A0A6YXZ4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ighv1-62-2A0A0A6YXZ4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ighv1-62-2A0A0A6YXZ4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv1-62-2A0A0A6YXZ4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv1-62-2A0A0A6YXZ4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv1-62-2A0A0A6YXZ4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-62-2A0A0A6YXZ4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Ighv1-62-2A0A0A6YXZ4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Ighv1-62-2A0A0A6YXZ4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv1-62-2A0A0A6YXZ4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-62-2A0A0A6YXZ4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ighv1-62-2A0A0A6YXZ4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-62-2A0A0A6YXZ4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-62-2A0A0A6YXZ4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-62-2A0A0A6YXZ4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-62-2A0A0A6YXZ4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-62-2A0A0A6YXZ4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ighv1-62-2A0A0A6YXZ4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ighv1-62-2A0A0A6YXZ4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.88■□□□□ 0.77
Ighv1-62-2A0A0A6YXZ4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-62-2A0A0A6YXZ4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-62-2A0A0A6YXZ4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-62-2A0A0A6YXZ4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-62-2A0A0A6YXZ4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-62-2A0A0A6YXZ4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-62-2A0A0A6YXZ4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.69■□□□□ 0.74
Ighv1-62-2A0A0A6YXZ4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-62-2A0A0A6YXZ4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv1-62-2A0A0A6YXZ4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ighv1-62-2A0A0A6YXZ4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-62-2A0A0A6YXZ4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv1-62-2A0A0A6YXZ4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-62-2A0A0A6YXZ4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ighv1-62-2A0A0A6YXZ4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-62-2A0A0A6YXZ4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ighv1-62-2A0A0A6YXZ4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-62-2A0A0A6YXZ4 Gm15042-201ENSMUST00000120212 883 ntBASIC19.53■□□□□ 0.72
Ighv1-62-2A0A0A6YXZ4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ighv1-62-2A0A0A6YXZ4 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.52■□□□□ 0.71
Ighv1-62-2A0A0A6YXZ4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv1-62-2A0A0A6YXZ4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-62-2A0A0A6YXZ4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-62-2A0A0A6YXZ4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-62-2A0A0A6YXZ4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms