RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Rhox8Q6VSS7 320 aa21.96■■□□□ 1.11
Col6a3-208ENSMUST00000188587 Rpgrip1Q9EPQ2 1331 aa19.93■□□□□ 0.78
Col6a3-208ENSMUST00000188587 Cngb1E1AZ71 1325 aa19.77■□□□□ 0.76
Col6a3-208ENSMUST00000188587 Ehmt2Q9Z148 1263 aaKnown RBP19.69■□□□□ 0.74
Col6a3-208ENSMUST00000188587 Ube2uB1AUC4 352 aa19.66■□□□□ 0.74
Col6a3-208ENSMUST00000188587 Esf1Q3V1V3 845 aaKnown RBP19.64■□□□□ 0.73
Col6a3-208ENSMUST00000188587 Pelp1Q9DBD5 1123 aaKnown RBP19.6■□□□□ 0.73
Col6a3-208ENSMUST00000188587 Las1lA2BE28 776 aaKnown RBP19.56■□□□□ 0.72
Col6a3-208ENSMUST00000188587 Wdr66E9Q743 1299 aa19.46■□□□□ 0.71
Col6a3-208ENSMUST00000188587 Zeb1Q64318 1117 aa19.41■□□□□ 0.7
Col6a3-208ENSMUST00000188587 Ccdc136Q3TVA9 1136 aa19.38■□□□□ 0.69
Col6a3-208ENSMUST00000188587 Npm2Q80W85 207 aa19.24■□□□□ 0.67
Col6a3-208ENSMUST00000188587 Gab3Q8BSM5 595 aa19.05■□□□□ 0.64
Col6a3-208ENSMUST00000188587 Myt1lP97500 1187 aa18.99■□□□□ 0.63
Col6a3-208ENSMUST00000188587 Trim41Q5NCC3 630 aa18.97■□□□□ 0.63
Col6a3-208ENSMUST00000188587 Rtl1Q7M732 1744 aa18.87■□□□□ 0.61
Col6a3-208ENSMUST00000188587 Amer1Q7TS75 1132 aa18.78■□□□□ 0.6
Col6a3-208ENSMUST00000188587 NischQ80TM9 1593 aa18.69■□□□□ 0.58
Col6a3-208ENSMUST00000188587 Stra8P70278 393 aa18.61■□□□□ 0.57
Col6a3-208ENSMUST00000188587 Ccdc180J3QNE4 1664 aa18.55■□□□□ 0.56
Col6a3-208ENSMUST00000188587 Slc24a1Q91WD8 1130 aa18.52■□□□□ 0.56
Col6a3-208ENSMUST00000188587 UbtfP25976 765 aaKnown RBP18.48■□□□□ 0.55
Col6a3-208ENSMUST00000188587 CenpbP27790 599 aa18.4■□□□□ 0.54
Col6a3-208ENSMUST00000188587 NefmP08553 848 aa18.31■□□□□ 0.52
Col6a3-208ENSMUST00000188587 4930567H17RikQ3V0K5 233 aa18.28■□□□□ 0.52
Col6a3-208ENSMUST00000188587 Il27Q8K3I6 234 aa18.22■□□□□ 0.51
Col6a3-208ENSMUST00000188587 Anp32bQ9EST5 272 aaKnown RBP18.18■□□□□ 0.5
Col6a3-208ENSMUST00000188587 Os9Q8K2C7 672 aa18.16■□□□□ 0.5
Col6a3-208ENSMUST00000188587 NeflP08551 543 aa18.11■□□□□ 0.49
Col6a3-208ENSMUST00000188587 Ttbk1Q6PCN3 1308 aa18.08■□□□□ 0.48
Col6a3-208ENSMUST00000188587 NrdcQ8BHG1 1161 aa18.08■□□□□ 0.48
Col6a3-208ENSMUST00000188587 Acin1Q9JIX8 1338 aaKnown RBP18.06■□□□□ 0.48
Col6a3-208ENSMUST00000188587 Neurod1Q60867 357 aa18.04■□□□□ 0.48
Col6a3-208ENSMUST00000188587 Fam50aQ9WV03 339 aaKnown RBP18.03■□□□□ 0.48
Col6a3-208ENSMUST00000188587 4933416C03RikQ3V063 378 aa17.97■□□□□ 0.47
Col6a3-208ENSMUST00000188587 Ap3b1Q9Z1T1 1105 aa17.97■□□□□ 0.47
Col6a3-208ENSMUST00000188587 NclP09405 707 aaKnown RBP17.96■□□□□ 0.47
Col6a3-208ENSMUST00000188587 Cdk11bP24788 784 aaKnown RBP17.88■□□□□ 0.45
Col6a3-208ENSMUST00000188587 Eif5bQ05D44 1216 aaKnown RBP17.87■□□□□ 0.45
Col6a3-208ENSMUST00000188587 Gm35339A0A140LHH9 1649 aa17.82■□□□□ 0.44
Col6a3-208ENSMUST00000188587 HrcG5E8J6 738 aa17.78■□□□□ 0.44
Col6a3-208ENSMUST00000188587 Tnnt3Q9QZ47 272 aa17.77■□□□□ 0.44
Col6a3-208ENSMUST00000188587 Zcchc6Q5BLK4 1491 aaKnown RBP17.75■□□□□ 0.43
Col6a3-208ENSMUST00000188587 Abcc9P70170 1546 aa17.68■□□□□ 0.42
Col6a3-208ENSMUST00000188587 Gm13697A2AK42 830 aa17.67■□□□□ 0.42
Col6a3-208ENSMUST00000188587 Nop58Q6DFW4 536 aaKnown RBP17.62■□□□□ 0.41
Col6a3-208ENSMUST00000188587 Zbtb7cQ8VCZ7 619 aa17.62■□□□□ 0.41
Col6a3-208ENSMUST00000188587 TonslQ6NZL6 1363 aa17.56■□□□□ 0.4
Col6a3-208ENSMUST00000188587 Chic1Q8CBW7 227 aa17.56■□□□□ 0.4
Col6a3-208ENSMUST00000188587 Hnrnpul2Q00PI9 745 aaKnown RBP17.55■□□□□ 0.4
Col6a3-208ENSMUST00000188587 Ppargc1bQ8VHJ7 1014 aa17.48■□□□□ 0.39
Col6a3-208ENSMUST00000188587 Atp1b4Q99ME6 356 aa17.48■□□□□ 0.39
Col6a3-208ENSMUST00000188587 Myt1Q8CFC2 1127 aa17.46■□□□□ 0.39
Col6a3-208ENSMUST00000188587 Ifnlr1Q8CGK5 535 aa17.45■□□□□ 0.38
Col6a3-208ENSMUST00000188587 Npm1Q61937 292 aaKnown RBP17.43■□□□□ 0.38
Col6a3-208ENSMUST00000188587 Erich6D3Z6S9 713 aa17.38■□□□□ 0.37
Col6a3-208ENSMUST00000188587 Nlrp6Q91WS2 869 aa17.38■□□□□ 0.37
Col6a3-208ENSMUST00000188587 Gm13695A2AK44 830 aa17.37■□□□□ 0.37
Col6a3-208ENSMUST00000188587 Pcgf6Q99NA9 353 aa17.36■□□□□ 0.37
Col6a3-208ENSMUST00000188587 DiexfQ8BTT6 772 aaKnown RBP17.35■□□□□ 0.37
Col6a3-208ENSMUST00000188587 Rtl5Q5DTT4 599 aa17.35■□□□□ 0.37
Col6a3-208ENSMUST00000188587 Lmod2Q3UHZ5 550 aa17.28■□□□□ 0.36
Col6a3-208ENSMUST00000188587 Zbtb4Q5F293 982 aa17.28■□□□□ 0.36
Col6a3-208ENSMUST00000188587 Hdac5Q9Z2V6 1113 aa17.28■□□□□ 0.36
Col6a3-208ENSMUST00000188587 Polr3glQ8R0C0 218 aa17.27■□□□□ 0.35
Col6a3-208ENSMUST00000188587 Plppr3Q7TPB0 716 aa17.23■□□□□ 0.35
Col6a3-208ENSMUST00000188587 Prdm10Q3UTQ7 1184 aa17.21■□□□□ 0.34
Col6a3-208ENSMUST00000188587 DaxxO35613 739 aa17.16■□□□□ 0.34
Col6a3-208ENSMUST00000188587 Plekhg3Q4VAC9 1341 aa17.16■□□□□ 0.34
Col6a3-208ENSMUST00000188587 Mier1Q5UAK0 511 aa17.15■□□□□ 0.34
Col6a3-208ENSMUST00000188587 Supt5hO55201 1082 aaKnown RBP17.1■□□□□ 0.33
Col6a3-208ENSMUST00000188587 ArxO35085 564 aa17.03■□□□□ 0.32
Col6a3-208ENSMUST00000188587 Fkbp15Q6P9Q6 1216 aaKnown RBP17.01■□□□□ 0.31
Col6a3-208ENSMUST00000188587 ClspnQ80YR7 1315 aa16.99■□□□□ 0.31
Col6a3-208ENSMUST00000188587 Anp32aO35381 247 aa16.99■□□□□ 0.31
Col6a3-208ENSMUST00000188587 CatipB9EKE5 520 aa16.93■□□□□ 0.3
Col6a3-208ENSMUST00000188587 Rangap1P46061 589 aaKnown RBP16.93■□□□□ 0.3
Col6a3-208ENSMUST00000188587 Hsp90aa1P07901 733 aaKnown RBP16.91■□□□□ 0.3
Col6a3-208ENSMUST00000188587 Safb2Q80YR5 991 aaKnown RBP16.91■□□□□ 0.3
Col6a3-208ENSMUST00000188587 Mapk8ip2Q9ERE9 830 aa16.87■□□□□ 0.29
Col6a3-208ENSMUST00000188587 Upf2A2AT37 1269 aaKnown RBP16.83■□□□□ 0.29
Col6a3-208ENSMUST00000188587 Brd4Q9ESU6 1400 aaKnown RBP16.79■□□□□ 0.28
Col6a3-208ENSMUST00000188587 Csrnp3P59055 597 aa16.78■□□□□ 0.28
Col6a3-208ENSMUST00000188587 Clip1Q922J3 1391 aa16.77■□□□□ 0.28
Col6a3-208ENSMUST00000188587 Eid3Q3V124 375 aa16.77■□□□□ 0.28
Col6a3-208ENSMUST00000188587 P3h3Q8CG70 732 aa16.76■□□□□ 0.27
Col6a3-208ENSMUST00000188587 Rb1cc1Q9ESK9 1588 aa16.74■□□□□ 0.27
Col6a3-208ENSMUST00000188587 Ubl4bQ9CQ84 188 aa16.73■□□□□ 0.27
Col6a3-208ENSMUST00000188587 Fgd1P52734 960 aa16.71■□□□□ 0.27
Col6a3-208ENSMUST00000188587 Znf326O88291 580 aa16.71■□□□□ 0.27
Col6a3-208ENSMUST00000188587 Ccer2J3QPU5 274 aa16.7■□□□□ 0.26
Col6a3-208ENSMUST00000188587 Rad21Q61550 635 aaKnown RBP16.67■□□□□ 0.26
Col6a3-208ENSMUST00000188587 DekQ7TNV0 380 aaKnown RBP16.65■□□□□ 0.26
Col6a3-208ENSMUST00000188587 Clstn2Q9ER65 966 aa16.63■□□□□ 0.25
Col6a3-208ENSMUST00000188587 Ythdc1E9Q5K9 736 aaKnown RBP16.59■□□□□ 0.25
Col6a3-208ENSMUST00000188587 Lmod3E9QA62 571 aa16.59■□□□□ 0.25
Col6a3-208ENSMUST00000188587 Ppp4r2Q0VGB7 417 aa16.58■□□□□ 0.25
Col6a3-208ENSMUST00000188587 Chic2Q9D9G3 165 aa16.58■□□□□ 0.24
Col6a3-208ENSMUST00000188587 Calr4Q3TQS0 420 aa16.55■□□□□ 0.24
Col6a3-208ENSMUST00000188587 Trim26Q99PN3 545 aa16.55■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms