Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Gm10542F6XDR3 Gm25239-201ENSMUST00000174915 86 ntBASIC23.64■■□□□ 1.37
Gm10542F6XDR3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm10542F6XDR3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Gm10542F6XDR3 Psd-208ENSMUST00000224556 2034 ntBASIC22.28■■□□□ 1.16
Gm10542F6XDR3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm10542F6XDR3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm10542F6XDR3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm10542F6XDR3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm10542F6XDR3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gm10542F6XDR3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm10542F6XDR3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm10542F6XDR3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm10542F6XDR3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm10542F6XDR3 Gm15042-201ENSMUST00000120212 883 ntBASIC21.27■■□□□ 1
Gm10542F6XDR3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm10542F6XDR3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.15■□□□□ 0.98
Gm10542F6XDR3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm10542F6XDR3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm10542F6XDR3 Gm15045-201ENSMUST00000117359 883 ntBASIC20.89■□□□□ 0.93
Gm10542F6XDR3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm10542F6XDR3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm10542F6XDR3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm10542F6XDR3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gm10542F6XDR3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm10542F6XDR3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm10542F6XDR3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm10542F6XDR3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm10542F6XDR3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm10542F6XDR3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm10542F6XDR3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm10542F6XDR3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.45■□□□□ 0.86
Gm10542F6XDR3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm10542F6XDR3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.38■□□□□ 0.85
Gm10542F6XDR3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.33■□□□□ 0.85
Gm10542F6XDR3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm10542F6XDR3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm10542F6XDR3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm10542F6XDR3 Gm24109-201ENSMUST00000175489 103 ntBASIC20.18■□□□□ 0.82
Gm10542F6XDR3 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.14■□□□□ 0.81
Gm10542F6XDR3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm10542F6XDR3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.1■□□□□ 0.81
Gm10542F6XDR3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm10542F6XDR3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20■□□□□ 0.79
Gm10542F6XDR3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm10542F6XDR3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gm10542F6XDR3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm10542F6XDR3 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.85■□□□□ 0.77
Gm10542F6XDR3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm10542F6XDR3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm10542F6XDR3 Gm23366-201ENSMUST00000175022 89 ntBASIC19.82■□□□□ 0.76
Gm10542F6XDR3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm10542F6XDR3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm10542F6XDR3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm10542F6XDR3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm10542F6XDR3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Gm10542F6XDR3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm10542F6XDR3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm10542F6XDR3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gm10542F6XDR3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.6■□□□□ 0.73
Gm10542F6XDR3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm10542F6XDR3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm10542F6XDR3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.58■□□□□ 0.72
Gm10542F6XDR3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm10542F6XDR3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gm10542F6XDR3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm10542F6XDR3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Gm10542F6XDR3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm10542F6XDR3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Gm10542F6XDR3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm10542F6XDR3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm10542F6XDR3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm10542F6XDR3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm10542F6XDR3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm10542F6XDR3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm10542F6XDR3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm10542F6XDR3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm10542F6XDR3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm10542F6XDR3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Gm10542F6XDR3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10542F6XDR3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Gm10542F6XDR3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm10542F6XDR3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Gm10542F6XDR3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm10542F6XDR3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm10542F6XDR3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Gm10542F6XDR3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm10542F6XDR3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm10542F6XDR3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm10542F6XDR3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm10542F6XDR3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm10542F6XDR3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Gm10542F6XDR3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm10542F6XDR3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.94■□□□□ 0.62
Gm10542F6XDR3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm10542F6XDR3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm10542F6XDR3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Gm10542F6XDR3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm10542F6XDR3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm10542F6XDR3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms