RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C RSC3Q06639 885 aa3.67□□□□□ -1.82
SPT4YGR063C PMT7Q06644 662 aa3.67□□□□□ -1.82
SPT4YGR063C YOR352WQ08816 343 aa3.67□□□□□ -1.82
SPT4YGR063C SOG2Q08817 791 aa3.67□□□□□ -1.82
SPT4YGR063C RIB2Q12362 591 aaKnown RBP3.67□□□□□ -1.82
SPT4YGR063C MDM20Q12387 796 aaKnown RBP3.67□□□□□ -1.82
SPT4YGR063C CEX1Q12453 761 aa3.67□□□□□ -1.82
SPT4YGR063C AIR2Q12476 344 aaKnown RBP3.67□□□□□ -1.82
SPT4YGR063C ARP6Q12509 438 aa3.67□□□□□ -1.82
SPT4YGR063C RTP1Q12751 981 aa3.67□□□□□ -1.82
SPT4YGR063C YOR111WQ99210 232 aa3.67□□□□□ -1.82
SPT4YGR063C TEF1P02994 458 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C LEU2P04173 364 aaPredicted RBP3.66□□□□□ -1.82
SPT4YGR063C MSS116P15424 664 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C KGD2P19262 463 aaPredicted RBP3.66□□□□□ -1.82
SPT4YGR063C APL1P27351 700 aa3.66□□□□□ -1.82
SPT4YGR063C SEC65P29478 273 aa3.66□□□□□ -1.82
SPT4YGR063C FBP26P32604 452 aa3.66□□□□□ -1.82
SPT4YGR063C RTG1P32607 177 aa3.66□□□□□ -1.82
SPT4YGR063C YME1P32795 747 aa3.66□□□□□ -1.82
SPT4YGR063C SEC61P32915 480 aa3.66□□□□□ -1.82
SPT4YGR063C YBL055CP34220 418 aaPredicted RBP3.66□□□□□ -1.82
SPT4YGR063C NTH2P35172 780 aa3.66□□□□□ -1.82
SPT4YGR063C YBR225WP38321 900 aa3.66□□□□□ -1.82
SPT4YGR063C RCK2P38623 610 aa3.66□□□□□ -1.82
SPT4YGR063C NMD3P38861 518 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C TMN3P40071 706 aa3.66□□□□□ -1.82
SPT4YGR063C RIC1P40395 1056 aa3.66□□□□□ -1.82
SPT4YGR063C ESL1P40456 1118 aa3.66□□□□□ -1.82
SPT4YGR063C BUD6P41697 788 aa3.66□□□□□ -1.82
SPT4YGR063C XKS1P42826 600 aa3.66□□□□□ -1.82
SPT4YGR063C SWP82P43554 623 aa3.66□□□□□ -1.82
SPT4YGR063C FYV8P46949 817 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C TRF5P48561 642 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C VMA10P48836 114 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C RNR4P49723 345 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C IMD3P50095 523 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C CUE3P53137 624 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C LIF1P53150 421 aa3.66□□□□□ -1.82
SPT4YGR063C RTC4P53850 401 aa3.66□□□□□ -1.82
SPT4YGR063C IMP4P53941 290 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C HPC2Q01448 625 aa3.66□□□□□ -1.82
SPT4YGR063C MEC3Q02574 474 aa3.66□□□□□ -1.82
SPT4YGR063C ECM23Q02710 187 aa3.66□□□□□ -1.82
SPT4YGR063C ISU1Q03020 165 aa3.66□□□□□ -1.82
SPT4YGR063C SNZ1Q03148 297 aa3.66□□□□□ -1.82
SPT4YGR063C RVB1Q03940 463 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C SYF1Q04048 859 aaPredicted RBP3.66□□□□□ -1.82
SPT4YGR063C SHE9Q04172 456 aa3.66□□□□□ -1.82
SPT4YGR063C EMI2Q04409 500 aaKnown RBP3.66□□□□□ -1.82
SPT4YGR063C HIM1Q06674 414 aa3.66□□□□□ -1.82
SPT4YGR063C VHS3Q08438 674 aa3.66□□□□□ -1.82
SPT4YGR063C YLR125WQ12138 136 aa3.66□□□□□ -1.82
SPT4YGR063C TIP41Q12199 356 aa3.66□□□□□ -1.82
SPT4YGR063C EMP46Q12396 444 aa3.66□□□□□ -1.82
SPT4YGR063C IPP1P00817 287 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C RED1P14291 827 aa3.65□□□□□ -1.83
SPT4YGR063C SRV2P17555 526 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C PRP6P19735 899 aaPredicted RBP3.65□□□□□ -1.83
SPT4YGR063C RET1P22276 1149 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C SPB1P25582 841 aaPredicted RBP3.65□□□□□ -1.83
SPT4YGR063C POL4P25615 582 aa3.65□□□□□ -1.83
SPT4YGR063C VPS21P36017 210 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C TPO5P36029 618 aa3.65□□□□□ -1.83
SPT4YGR063C RSM22P36056 628 aa3.65□□□□□ -1.83
SPT4YGR063C SHM1P37292 490 aaPredicted RBP3.65□□□□□ -1.83
SPT4YGR063C UGA2P38067 497 aa3.65□□□□□ -1.83
SPT4YGR063C AKL1P38080 1108 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C YHR112CP38716 378 aa3.65□□□□□ -1.83
SPT4YGR063C CTM1P38818 585 aa3.65□□□□□ -1.83
SPT4YGR063C RPN10P38886 268 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C NPT1P39683 429 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C AST2P39945 430 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C RPH1P39956 796 aa3.65□□□□□ -1.83
SPT4YGR063C VFA1P40080 203 aa3.65□□□□□ -1.83
SPT4YGR063C SMX2P40204 77 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C PAC11P40960 533 aa3.65□□□□□ -1.83
SPT4YGR063C APS3P47064 194 aa3.65□□□□□ -1.83
SPT4YGR063C DAN4P47179 1161 aa3.65□□□□□ -1.83
SPT4YGR063C SSN8P47821 323 aa3.65□□□□□ -1.83
SPT4YGR063C PSP1P50896 841 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C MON1P53129 644 aa3.65□□□□□ -1.83
SPT4YGR063C MRPS35P53292 345 aa3.65□□□□□ -1.83
SPT4YGR063C TOF1P53840 1238 aa3.65□□□□□ -1.83
SPT4YGR063C CWC25P53854 179 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C ELA1P53861 379 aaPredicted RBP3.65□□□□□ -1.83
SPT4YGR063C YNL108CP53929 270 aa3.65□□□□□ -1.83
SPT4YGR063C YNL040WP53960 456 aaPredicted RBP3.65□□□□□ -1.83
SPT4YGR063C RPT6Q01939 405 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C LGE1Q02796 332 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C EEB1Q02891 456 aa3.65□□□□□ -1.83
SPT4YGR063C GPI17Q04080 534 aa3.65□□□□□ -1.83
SPT4YGR063C VIP1Q06685 1146 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C FRA1Q07825 749 aa3.65□□□□□ -1.83
SPT4YGR063C YOL057WQ08225 711 aa3.65□□□□□ -1.83
SPT4YGR063C SGO1Q08490 590 aa3.65□□□□□ -1.83
SPT4YGR063C TRM8Q12009 286 aa3.65□□□□□ -1.83
SPT4YGR063C CDC53Q12018 815 aaKnown RBP3.65□□□□□ -1.83
SPT4YGR063C DAS2Q12084 232 aa3.65□□□□□ -1.83
SPT4YGR063C RUP1Q12242 671 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms