Protein–RNA interactions for Protein: P27351

APL1, AP-2 complex subunit beta, yeastyeast

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
APL1P27351 YML009W-BYML009W-B 477 nt22.17■■□□□ 1.14
APL1P27351 NSR1YGR159C 1245 nt22.13■■□□□ 1.13
APL1P27351 NOP1YDL014W 984 nt21.47■■□□□ 1.03
APL1P27351 MDJ1YFL016C 1536 nt19.81■□□□□ 0.76
APL1P27351 YKL036CYKL036C 393 nt19.67■□□□□ 0.74
APL1P27351 SRX1YKL086W 384 nt18.75■□□□□ 0.59
APL1P27351 Q0297Q0297 156 nt18.72■□□□□ 0.59
APL1P27351 YJL027CYJL027C 417 nt18.34■□□□□ 0.53
APL1P27351 YCR051WYCR051W 669 nt17.81■□□□□ 0.44
APL1P27351 SCS3YGL126W 1143 nt17.81■□□□□ 0.44
APL1P27351 DBP2YNL112W 1641 nt17.43■□□□□ 0.38
APL1P27351 TRN1tP(UGG)A 72 nt17.04■□□□□ 0.32
APL1P27351 SUF9tP(UGG)F 72 nt17.04■□□□□ 0.32
APL1P27351 SUF8tP(UGG)H 72 nt17.04■□□□□ 0.32
APL1P27351 tP(UGG)LtP(UGG)L 72 nt17.04■□□□□ 0.32
APL1P27351 SUF7tP(UGG)M 72 nt17.04■□□□□ 0.32
APL1P27351 tP(UGG)N1tP(UGG)N1 72 nt17.04■□□□□ 0.32
APL1P27351 tP(UGG)N2tP(UGG)N2 72 nt17.04■□□□□ 0.32
APL1P27351 tP(UGG)O1tP(UGG)O1 72 nt17.04■□□□□ 0.32
APL1P27351 SUF11tP(UGG)O2 72 nt17.04■□□□□ 0.32
APL1P27351 YOL085CYOL085C 342 nt17.03■□□□□ 0.32
APL1P27351 CCC1YLR220W 969 nt16.91■□□□□ 0.3
APL1P27351 YBR190WYBR190W 312 nt16.91■□□□□ 0.3
APL1P27351 PKP1YIL042C 1185 nt16.82■□□□□ 0.28
APL1P27351 RPP1BYDL130W 321 nt16.81■□□□□ 0.28
APL1P27351 RTC3YHR087W 336 nt16.57■□□□□ 0.24
APL1P27351 RVS167YDR388W 1449 nt16.39■□□□□ 0.21
APL1P27351 SCJ1YMR214W 1134 nt16.26■□□□□ 0.19
APL1P27351 PET122YER153C 765 nt16.09■□□□□ 0.17
APL1P27351 tP(UGG)O3tP(UGG)O3 72 nt16.08■□□□□ 0.16
APL1P27351 ATS1YAL020C 1002 nt15.89■□□□□ 0.13
APL1P27351 SCR1SCR1 522 nt15.89■□□□□ 0.13
APL1P27351 SHR5YOL110W 714 nt15.77■□□□□ 0.12
APL1P27351 RRN5YLR141W 1092 nt15.61■□□□□ 0.09
APL1P27351 YDJ1YNL064C 1230 nt15.54■□□□□ 0.08
APL1P27351 PUT4YOR348C 1884 nt15.45■□□□□ 0.06
APL1P27351 URN1YPR152C 1398 nt15.44■□□□□ 0.06
APL1P27351 DEP1YAL013W 1218 nt15.41■□□□□ 0.06
APL1P27351 YER088W-BYER088W-B 147 nt15.29■□□□□ 0.04
APL1P27351 RSB1YOR049C 1065 nt15.26■□□□□ 0.03
APL1P27351 GAR1YHR089C 618 nt15.25■□□□□ 0.03
APL1P27351 SSA3YBL075C 1950 nt15.25■□□□□ 0.03
APL1P27351 OPI9YLR338W 858 nt15.22■□□□□ 0.03
APL1P27351 RPN10YHR200W 807 nt15.18■□□□□ 0.02
APL1P27351 SAH1YER043C 1350 nt15.18■□□□□ 0.02
APL1P27351 ARE1YCR048W 1833 nt15.13■□□□□ 0.01
APL1P27351 YNL208WYNL208W 600 nt15.12■□□□□ 0.01
APL1P27351 POA1YBR022W 534 nt15□□□□□ -0.01
APL1P27351 YHR049C-AYHR049C-A 297 nt14.97□□□□□ -0.01
APL1P27351 PUN1YLR414C 792 nt14.79□□□□□ -0.04
APL1P27351 TIR1YER011W 765 nt14.74□□□□□ -0.05
APL1P27351 PST2YDR032C 597 nt14.73□□□□□ -0.05
APL1P27351 YJR018WYJR018W 363 nt14.72□□□□□ -0.05
APL1P27351 BSC6YOL137W 1494 nt14.69□□□□□ -0.06
APL1P27351 PTC2YER089C 1395 nt14.64□□□□□ -0.07
APL1P27351 BUD23YCR047C 828 nt14.63□□□□□ -0.07
APL1P27351 SSA1YAL005C 1929 nt14.57□□□□□ -0.08
APL1P27351 NAB2YGL122C 1578 nt14.46□□□□□ -0.09
APL1P27351 YJR120WYJR120W 351 nt14.43□□□□□ -0.1
APL1P27351 RPP2BYDR382W 333 nt14.39□□□□□ -0.11
APL1P27351 SRB2YHR041C 633 nt14.3□□□□□ -0.12
APL1P27351 FPR4YLR449W 1179 nt14.25□□□□□ -0.13
APL1P27351 DAL1YIR027C 1383 nt14.24□□□□□ -0.13
APL1P27351 FIS1YIL065C 468 nt14.23□□□□□ -0.13
APL1P27351 INM2YDR287W 879 nt14.21□□□□□ -0.13
APL1P27351 SHU1YHL006C 453 nt14.18□□□□□ -0.14
APL1P27351 PHO4YFR034C 939 nt14.12□□□□□ -0.15
APL1P27351 SPT5YML010W 3192 nt14.09□□□□□ -0.15
APL1P27351 YKL097CYKL097C 411 nt14.09□□□□□ -0.15
APL1P27351 WWM1YFL010C 636 nt14.06□□□□□ -0.16
APL1P27351 BDH2YAL061W 1254 nt14.06□□□□□ -0.16
APL1P27351 YBL100CYBL100C 315 nt14.06□□□□□ -0.16
APL1P27351 YAL037C-BYAL037C-B 975 nt14.03□□□□□ -0.16
APL1P27351 YGR021WYGR021W 873 nt13.93□□□□□ -0.18
APL1P27351 FUN26YAL022C 1554 nt13.88□□□□□ -0.19
APL1P27351 YPS1YLR120C 1710 nt13.87□□□□□ -0.19
APL1P27351 HOM6YJR139C 1080 nt13.87□□□□□ -0.19
APL1P27351 LSM3YLR438C-A 270 nt13.84□□□□□ -0.19
APL1P27351 TRM9YML014W 840 nt13.84□□□□□ -0.19
APL1P27351 YFL021C-AYFL021C-A 855 nt13.82□□□□□ -0.2
APL1P27351 MNP1YGL068W 585 nt13.79□□□□□ -0.2
APL1P27351 MEP2YNL142W 1500 nt13.79□□□□□ -0.2
APL1P27351 YDR095CYDR095C 411 nt13.77□□□□□ -0.21
APL1P27351 YHR165W-AYHR165W-A 312 nt13.77□□□□□ -0.21
APL1P27351 SSA4YER103W 1929 nt13.74□□□□□ -0.21
APL1P27351 ALF1YNL148C 765 nt13.73□□□□□ -0.21
APL1P27351 RKM5YLR137W 1104 nt13.67□□□□□ -0.22
APL1P27351 CCT6YDR188W 1641 nt13.67□□□□□ -0.22
APL1P27351 SUF2tP(AGG)C 72 nt13.59□□□□□ -0.23
APL1P27351 SUF10tP(AGG)N 72 nt13.59□□□□□ -0.23
APL1P27351 DCW1YKL046C 1350 nt13.58□□□□□ -0.24
APL1P27351 RPP2AYOL039W 321 nt13.53□□□□□ -0.24
APL1P27351 YOR139CYOR139C 393 nt13.53□□□□□ -0.24
APL1P27351 NPL3YDR432W 1245 nt13.49□□□□□ -0.25
APL1P27351 SIS1YNL007C 1059 nt13.49□□□□□ -0.25
APL1P27351 YOL037CYOL037C 354 nt13.49□□□□□ -0.25
APL1P27351 PTP1YDL230W 1008 nt13.46□□□□□ -0.25
APL1P27351 EMI2YDR516C 1503 nt13.41□□□□□ -0.26
APL1P27351 CAC2YML102W 1407 nt13.39□□□□□ -0.27
APL1P27351 YMR090WYMR090W 684 nt13.34□□□□□ -0.27
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms