Protein–RNA interactions for Protein: Q06639

RSC3, Chromatin structure-remodeling complex protein RSC3, yeastyeast

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC3Q06639 YML009W-BYML009W-B 477 nt20.14■□□□□ 0.81
RSC3Q06639 NSR1YGR159C 1245 nt20.07■□□□□ 0.8
RSC3Q06639 NOP1YDL014W 984 nt19.62■□□□□ 0.73
RSC3Q06639 YKL036CYKL036C 393 nt18.1■□□□□ 0.49
RSC3Q06639 MDJ1YFL016C 1536 nt17.77■□□□□ 0.44
RSC3Q06639 Q0297Q0297 156 nt17.2■□□□□ 0.34
RSC3Q06639 SRX1YKL086W 384 nt17.15■□□□□ 0.34
RSC3Q06639 YJL027CYJL027C 417 nt16.88■□□□□ 0.29
RSC3Q06639 SCS3YGL126W 1143 nt16.47■□□□□ 0.23
RSC3Q06639 YCR051WYCR051W 669 nt16.23■□□□□ 0.19
RSC3Q06639 DBP2YNL112W 1641 nt15.77■□□□□ 0.12
RSC3Q06639 YOL085CYOL085C 342 nt15.69■□□□□ 0.1
RSC3Q06639 TRN1tP(UGG)A 72 nt15.51■□□□□ 0.07
RSC3Q06639 SUF9tP(UGG)F 72 nt15.51■□□□□ 0.07
RSC3Q06639 SUF8tP(UGG)H 72 nt15.51■□□□□ 0.07
RSC3Q06639 tP(UGG)LtP(UGG)L 72 nt15.51■□□□□ 0.07
RSC3Q06639 SUF7tP(UGG)M 72 nt15.51■□□□□ 0.07
RSC3Q06639 tP(UGG)N1tP(UGG)N1 72 nt15.51■□□□□ 0.07
RSC3Q06639 tP(UGG)N2tP(UGG)N2 72 nt15.51■□□□□ 0.07
RSC3Q06639 tP(UGG)O1tP(UGG)O1 72 nt15.51■□□□□ 0.07
RSC3Q06639 SUF11tP(UGG)O2 72 nt15.51■□□□□ 0.07
RSC3Q06639 RPP1BYDL130W 321 nt15.42■□□□□ 0.06
RSC3Q06639 PKP1YIL042C 1185 nt15.41■□□□□ 0.06
RSC3Q06639 CCC1YLR220W 969 nt15.29■□□□□ 0.04
RSC3Q06639 YBR190WYBR190W 312 nt15.19■□□□□ 0.02
RSC3Q06639 RTC3YHR087W 336 nt14.8□□□□□ -0.04
RSC3Q06639 RVS167YDR388W 1449 nt14.8□□□□□ -0.04
RSC3Q06639 ATS1YAL020C 1002 nt14.74□□□□□ -0.05
RSC3Q06639 SCJ1YMR214W 1134 nt14.73□□□□□ -0.05
RSC3Q06639 PET122YER153C 765 nt14.72□□□□□ -0.05
RSC3Q06639 tP(UGG)O3tP(UGG)O3 72 nt14.67□□□□□ -0.06
RSC3Q06639 SCR1SCR1 522 nt14.56□□□□□ -0.08
RSC3Q06639 SHR5YOL110W 714 nt14.3□□□□□ -0.12
RSC3Q06639 RRN5YLR141W 1092 nt14.29□□□□□ -0.12
RSC3Q06639 SSA3YBL075C 1950 nt14.25□□□□□ -0.13
RSC3Q06639 YDJ1YNL064C 1230 nt14.21□□□□□ -0.13
RSC3Q06639 YER088W-BYER088W-B 147 nt14.02□□□□□ -0.17
RSC3Q06639 RSB1YOR049C 1065 nt13.97□□□□□ -0.17
RSC3Q06639 URN1YPR152C 1398 nt13.87□□□□□ -0.19
RSC3Q06639 GAR1YHR089C 618 nt13.84□□□□□ -0.19
RSC3Q06639 DEP1YAL013W 1218 nt13.84□□□□□ -0.19
RSC3Q06639 PUT4YOR348C 1884 nt13.79□□□□□ -0.2
RSC3Q06639 OPI9YLR338W 858 nt13.7□□□□□ -0.22
RSC3Q06639 RPN10YHR200W 807 nt13.68□□□□□ -0.22
RSC3Q06639 YNL208WYNL208W 600 nt13.68□□□□□ -0.22
RSC3Q06639 PST2YDR032C 597 nt13.66□□□□□ -0.22
RSC3Q06639 SAH1YER043C 1350 nt13.59□□□□□ -0.23
RSC3Q06639 Q0182Q0182 405 nt13.57□□□□□ -0.24
RSC3Q06639 ARE1YCR048W 1833 nt13.54□□□□□ -0.24
RSC3Q06639 TIR1YER011W 765 nt13.4□□□□□ -0.26
RSC3Q06639 YHR049C-AYHR049C-A 297 nt13.33□□□□□ -0.28
RSC3Q06639 POA1YBR022W 534 nt13.33□□□□□ -0.28
RSC3Q06639 PUN1YLR414C 792 nt13.3□□□□□ -0.28
RSC3Q06639 SSA1YAL005C 1929 nt13.24□□□□□ -0.29
RSC3Q06639 YJR018WYJR018W 363 nt13.24□□□□□ -0.29
RSC3Q06639 MOT3YMR070W 1473 nt13.18□□□□□ -0.3
RSC3Q06639 PTC2YER089C 1395 nt13.11□□□□□ -0.31
RSC3Q06639 YKL097CYKL097C 411 nt13.1□□□□□ -0.31
RSC3Q06639 SHU1YHL006C 453 nt13.09□□□□□ -0.31
RSC3Q06639 YJR120WYJR120W 351 nt13.07□□□□□ -0.32
RSC3Q06639 BSC6YOL137W 1494 nt13.04□□□□□ -0.32
RSC3Q06639 SRB2YHR041C 633 nt13.02□□□□□ -0.33
RSC3Q06639 BUD23YCR047C 828 nt13□□□□□ -0.33
RSC3Q06639 RPP2BYDR382W 333 nt12.98□□□□□ -0.33
RSC3Q06639 NAB2YGL122C 1578 nt12.96□□□□□ -0.33
RSC3Q06639 YAL037C-BYAL037C-B 975 nt12.85□□□□□ -0.35
RSC3Q06639 WWM1YFL010C 636 nt12.8□□□□□ -0.36
RSC3Q06639 DAL1YIR027C 1383 nt12.8□□□□□ -0.36
RSC3Q06639 INM2YDR287W 879 nt12.79□□□□□ -0.36
RSC3Q06639 FIS1YIL065C 468 nt12.79□□□□□ -0.36
RSC3Q06639 YGR021WYGR021W 873 nt12.75□□□□□ -0.37
RSC3Q06639 BDH2YAL061W 1254 nt12.73□□□□□ -0.37
RSC3Q06639 HOM6YJR139C 1080 nt12.71□□□□□ -0.37
RSC3Q06639 FPR4YLR449W 1179 nt12.71□□□□□ -0.37
RSC3Q06639 PHO4YFR034C 939 nt12.67□□□□□ -0.38
RSC3Q06639 YBL100CYBL100C 315 nt12.65□□□□□ -0.38
RSC3Q06639 YFL021C-AYFL021C-A 855 nt12.62□□□□□ -0.39
RSC3Q06639 MNP1YGL068W 585 nt12.61□□□□□ -0.39
RSC3Q06639 LSM3YLR438C-A 270 nt12.59□□□□□ -0.39
RSC3Q06639 YOR139CYOR139C 393 nt12.59□□□□□ -0.39
RSC3Q06639 RKM5YLR137W 1104 nt12.52□□□□□ -0.41
RSC3Q06639 FUN26YAL022C 1554 nt12.52□□□□□ -0.41
RSC3Q06639 SPT5YML010W 3192 nt12.49□□□□□ -0.41
RSC3Q06639 TRM9YML014W 840 nt12.48□□□□□ -0.41
RSC3Q06639 NPL3YDR432W 1245 nt12.46□□□□□ -0.41
RSC3Q06639 YOL037CYOL037C 354 nt12.44□□□□□ -0.42
RSC3Q06639 YPS1YLR120C 1710 nt12.42□□□□□ -0.42
RSC3Q06639 SSA4YER103W 1929 nt12.39□□□□□ -0.43
RSC3Q06639 CCT6YDR188W 1641 nt12.38□□□□□ -0.43
RSC3Q06639 YDR095CYDR095C 411 nt12.36□□□□□ -0.43
RSC3Q06639 ALF1YNL148C 765 nt12.31□□□□□ -0.44
RSC3Q06639 PAC11YDR488C 1602 nt12.27□□□□□ -0.44
RSC3Q06639 MEP2YNL142W 1500 nt12.27□□□□□ -0.45
RSC3Q06639 SUF2tP(AGG)C 72 nt12.26□□□□□ -0.45
RSC3Q06639 SUF10tP(AGG)N 72 nt12.26□□□□□ -0.45
RSC3Q06639 YHR165W-AYHR165W-A 312 nt12.26□□□□□ -0.45
RSC3Q06639 NVJ2YPR091C 2313 nt12.23□□□□□ -0.45
RSC3Q06639 FPS1YLL043W 2010 nt12.2□□□□□ -0.46
RSC3Q06639 SIS1YNL007C 1059 nt12.17□□□□□ -0.46
RSC3Q06639 YLR281CYLR281C 468 nt12.16□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms