Protein–RNA interactions for Protein: P32607

RTG1, Retrograde regulation protein 1, yeastyeast

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG1P32607 YGR139WYGR139W 339 nt16.08■□□□□ 0.16
RTG1P32607 YML009W-BYML009W-B 477 nt15.79■□□□□ 0.12
RTG1P32607 NSR1YGR159C 1245 nt15.65■□□□□ 0.1
RTG1P32607 VAR1Q0140 1197 nt15.5■□□□□ 0.07
RTG1P32607 NOP1YDL014W 984 nt15.48■□□□□ 0.07
RTG1P32607 YDR509WYDR509W 348 nt14.57□□□□□ -0.08
RTG1P32607 YKL036CYKL036C 393 nt14.35□□□□□ -0.11
RTG1P32607 NME1NME1 340 nt14.3□□□□□ -0.12
RTG1P32607 CSM2YIL132C 642 nt14.24□□□□□ -0.13
RTG1P32607 Q0017Q0017 162 nt14.19□□□□□ -0.14
RTG1P32607 PAM17YKR065C 594 nt14.14□□□□□ -0.15
RTG1P32607 PAU21YOR394W 495 nt14.14□□□□□ -0.15
RTG1P32607 PAU22YPL282C 495 nt14.14□□□□□ -0.15
RTG1P32607 Q0142Q0142 177 nt14.09□□□□□ -0.15
RTG1P32607 MOT3YMR070W 1473 nt14.01□□□□□ -0.17
RTG1P32607 Q0144Q0144 330 nt14□□□□□ -0.17
RTG1P32607 ARO7YPR060C 771 nt14□□□□□ -0.17
RTG1P32607 Q0182Q0182 405 nt13.83□□□□□ -0.2
RTG1P32607 BMT5YIL096C 1011 nt13.81□□□□□ -0.2
RTG1P32607 REG2YBR050C 1017 nt13.78□□□□□ -0.2
RTG1P32607 BUR6YER159C 429 nt13.75□□□□□ -0.21
RTG1P32607 SEM1YDR363W-A 270 nt13.73□□□□□ -0.21
RTG1P32607 MDJ1YFL016C 1536 nt13.68□□□□□ -0.22
RTG1P32607 Q0297Q0297 156 nt13.57□□□□□ -0.24
RTG1P32607 SRX1YKL086W 384 nt13.49□□□□□ -0.25
RTG1P32607 Q0255Q0255 1419 nt13.47□□□□□ -0.25
RTG1P32607 Q0010Q0010 387 nt13.44□□□□□ -0.26
RTG1P32607 YOR169CYOR169C 465 nt13.4□□□□□ -0.26
RTG1P32607 AI5_BETAQ0075 1065 nt13.39□□□□□ -0.27
RTG1P32607 YJL027CYJL027C 417 nt13.39□□□□□ -0.27
RTG1P32607 YIR018C-AYIR018C-A 138 nt13.38□□□□□ -0.27
RTG1P32607 YGL188CYGL188C 174 nt13.34□□□□□ -0.27
RTG1P32607 SRN2YLR119W 642 nt13.31□□□□□ -0.28
RTG1P32607 AI3Q0060 1248 nt13.3□□□□□ -0.28
RTG1P32607 YCR099CYCR099C 468 nt13.18□□□□□ -0.3
RTG1P32607 SCS3YGL126W 1143 nt13.08□□□□□ -0.32
RTG1P32607 ATP6Q0085 780 nt13.06□□□□□ -0.32
RTG1P32607 ARP10YDR106W 855 nt13.05□□□□□ -0.32
RTG1P32607 AIR1YIL079C 1083 nt12.93□□□□□ -0.34
RTG1P32607 PET20YPL159C 762 nt12.93□□□□□ -0.34
RTG1P32607 ARA2YMR041C 1008 nt12.91□□□□□ -0.34
RTG1P32607 YCR051WYCR051W 669 nt12.77□□□□□ -0.37
RTG1P32607 YNR068CYNR068C 819 nt12.73□□□□□ -0.37
RTG1P32607 snR78snR78 87 nt12.71□□□□□ -0.37
RTG1P32607 KTR3YBR205W 1215 nt12.67□□□□□ -0.38
RTG1P32607 YLR122CYLR122C 378 nt12.65□□□□□ -0.38
RTG1P32607 ABZ2YMR289W 1125 nt12.65□□□□□ -0.38
RTG1P32607 YPL168WYPL168W 1293 nt12.62□□□□□ -0.39
RTG1P32607 UTP6YDR449C 1323 nt12.61□□□□□ -0.39
RTG1P32607 SKG1YKR100C 1068 nt12.57□□□□□ -0.4
RTG1P32607 YEL009C-AYEL009C-A 408 nt12.56□□□□□ -0.4
RTG1P32607 NEM1YHR004C 1341 nt12.56□□□□□ -0.4
RTG1P32607 PHO92YDR374C 921 nt12.54□□□□□ -0.4
RTG1P32607 YHL044WYHL044W 708 nt12.41□□□□□ -0.42
RTG1P32607 YOL085CYOL085C 342 nt12.39□□□□□ -0.43
RTG1P32607 AST1YBL069W 1290 nt12.36□□□□□ -0.43
RTG1P32607 STD1YOR047C 1335 nt12.3□□□□□ -0.44
RTG1P32607 URE2YNL229C 1065 nt12.28□□□□□ -0.44
RTG1P32607 RPM1RPM1 483 nt12.27□□□□□ -0.45
RTG1P32607 SCJ1YMR214W 1134 nt12.26□□□□□ -0.45
RTG1P32607 TOM20YGR082W 552 nt12.23□□□□□ -0.45
RTG1P32607 YAL016C-BYAL016C-B 186 nt12.22□□□□□ -0.45
RTG1P32607 PEX27YOR193W 1131 nt12.21□□□□□ -0.45
RTG1P32607 YMR119W-AYMR119W-A 375 nt12.2□□□□□ -0.46
RTG1P32607 YPL071CYPL071C 471 nt12.18□□□□□ -0.46
RTG1P32607 DBP2YNL112W 1641 nt12.16□□□□□ -0.46
RTG1P32607 RPP1BYDL130W 321 nt12.16□□□□□ -0.46
RTG1P32607 FAR3YMR052W 615 nt12.16□□□□□ -0.46
RTG1P32607 PKP1YIL042C 1185 nt12.13□□□□□ -0.47
RTG1P32607 HMT1YBR034C 1047 nt12.13□□□□□ -0.47
RTG1P32607 TRN1tP(UGG)A 72 nt12.11□□□□□ -0.47
RTG1P32607 SUF9tP(UGG)F 72 nt12.11□□□□□ -0.47
RTG1P32607 SUF8tP(UGG)H 72 nt12.11□□□□□ -0.47
RTG1P32607 tP(UGG)LtP(UGG)L 72 nt12.11□□□□□ -0.47
RTG1P32607 SUF7tP(UGG)M 72 nt12.11□□□□□ -0.47
RTG1P32607 tP(UGG)N1tP(UGG)N1 72 nt12.11□□□□□ -0.47
RTG1P32607 tP(UGG)N2tP(UGG)N2 72 nt12.11□□□□□ -0.47
RTG1P32607 tP(UGG)O1tP(UGG)O1 72 nt12.11□□□□□ -0.47
RTG1P32607 SUF11tP(UGG)O2 72 nt12.11□□□□□ -0.47
RTG1P32607 YDR008CYDR008C 351 nt12.1□□□□□ -0.47
RTG1P32607 GTT3YEL017W 1014 nt12.1□□□□□ -0.47
RTG1P32607 FTR1YER145C 1215 nt12.08□□□□□ -0.48
RTG1P32607 LCP5YER127W 1074 nt12.02□□□□□ -0.49
RTG1P32607 MET8YBR213W 825 nt11.98□□□□□ -0.49
RTG1P32607 PUS9YDL036C 1389 nt11.97□□□□□ -0.49
RTG1P32607 LSM12YHR121W 564 nt11.94□□□□□ -0.5
RTG1P32607 HAS1YMR290C 1518 nt11.93□□□□□ -0.5
RTG1P32607 CCC1YLR220W 969 nt11.93□□□□□ -0.5
RTG1P32607 IRC14YOR135C 342 nt11.91□□□□□ -0.5
RTG1P32607 URH1YDR400W 1023 nt11.9□□□□□ -0.5
RTG1P32607 YLR036CYLR036C 612 nt11.89□□□□□ -0.51
RTG1P32607 YEL074WYEL074W 339 nt11.85□□□□□ -0.51
RTG1P32607 MPS2YGL075C 1164 nt11.85□□□□□ -0.51
RTG1P32607 CLB6YGR109C 1143 nt11.83□□□□□ -0.52
RTG1P32607 ARC19YKL013C 516 nt11.83□□□□□ -0.52
RTG1P32607 THP3YPR045C 1413 nt11.8□□□□□ -0.52
RTG1P32607 YJL107CYJL107C 1164 nt11.8□□□□□ -0.52
RTG1P32607 UBC12YLR306W 567 nt11.8□□□□□ -0.52
RTG1P32607 NEJ1YLR265C 1029 nt11.78□□□□□ -0.52
RTG1P32607 RUF21RUF21 707 nt11.78□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms