Protein–RNA interactions for Protein: Q04172

SHE9, Sensitive to high expression protein 9, mitochondrial, yeastyeast

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE9Q04172 NSR1YGR159C 1245 nt20.27■□□□□ 0.84
SHE9Q04172 YML009W-BYML009W-B 477 nt19.96■□□□□ 0.79
SHE9Q04172 NOP1YDL014W 984 nt19.17■□□□□ 0.66
SHE9Q04172 MDJ1YFL016C 1536 nt18.52■□□□□ 0.56
SHE9Q04172 YKL036CYKL036C 393 nt17.2■□□□□ 0.34
SHE9Q04172 YJL027CYJL027C 417 nt17.03■□□□□ 0.32
SHE9Q04172 SRX1YKL086W 384 nt16.75■□□□□ 0.27
SHE9Q04172 Q0297Q0297 156 nt16.61■□□□□ 0.25
SHE9Q04172 DBP2YNL112W 1641 nt16.17■□□□□ 0.18
SHE9Q04172 YBR190WYBR190W 312 nt15.91■□□□□ 0.14
SHE9Q04172 YCR051WYCR051W 669 nt15.86■□□□□ 0.13
SHE9Q04172 RTC3YHR087W 336 nt15.54■□□□□ 0.08
SHE9Q04172 TRN1tP(UGG)A 72 nt15.46■□□□□ 0.07
SHE9Q04172 SUF9tP(UGG)F 72 nt15.46■□□□□ 0.07
SHE9Q04172 SUF8tP(UGG)H 72 nt15.46■□□□□ 0.07
SHE9Q04172 tP(UGG)LtP(UGG)L 72 nt15.46■□□□□ 0.07
SHE9Q04172 SUF7tP(UGG)M 72 nt15.46■□□□□ 0.07
SHE9Q04172 tP(UGG)N1tP(UGG)N1 72 nt15.46■□□□□ 0.07
SHE9Q04172 tP(UGG)N2tP(UGG)N2 72 nt15.46■□□□□ 0.07
SHE9Q04172 tP(UGG)O1tP(UGG)O1 72 nt15.46■□□□□ 0.07
SHE9Q04172 SUF11tP(UGG)O2 72 nt15.46■□□□□ 0.07
SHE9Q04172 SCS3YGL126W 1143 nt15.39■□□□□ 0.05
SHE9Q04172 CCC1YLR220W 969 nt15.32■□□□□ 0.04
SHE9Q04172 SSA3YBL075C 1950 nt15.16■□□□□ 0.02
SHE9Q04172 RVS167YDR388W 1449 nt15.07■□□□□ 0
SHE9Q04172 YOL085CYOL085C 342 nt14.93□□□□□ -0.02
SHE9Q04172 RPP1BYDL130W 321 nt14.91□□□□□ -0.02
SHE9Q04172 SCJ1YMR214W 1134 nt14.91□□□□□ -0.02
SHE9Q04172 PUT4YOR348C 1884 nt14.86□□□□□ -0.03
SHE9Q04172 PKP1YIL042C 1185 nt14.78□□□□□ -0.04
SHE9Q04172 tP(UGG)O3tP(UGG)O3 72 nt14.46□□□□□ -0.09
SHE9Q04172 ARE1YCR048W 1833 nt14.43□□□□□ -0.1
SHE9Q04172 SHR5YOL110W 714 nt14.42□□□□□ -0.1
SHE9Q04172 POA1YBR022W 534 nt14.36□□□□□ -0.11
SHE9Q04172 URN1YPR152C 1398 nt14.35□□□□□ -0.11
SHE9Q04172 Q0182Q0182 405 nt14.35□□□□□ -0.11
SHE9Q04172 PET122YER153C 765 nt14.32□□□□□ -0.12
SHE9Q04172 SAH1YER043C 1350 nt14.31□□□□□ -0.12
SHE9Q04172 YHR049C-AYHR049C-A 297 nt14.26□□□□□ -0.13
SHE9Q04172 OPI9YLR338W 858 nt14.25□□□□□ -0.13
SHE9Q04172 DEP1YAL013W 1218 nt14.21□□□□□ -0.13
SHE9Q04172 BSC6YOL137W 1494 nt14.15□□□□□ -0.14
SHE9Q04172 RPN10YHR200W 807 nt14□□□□□ -0.17
SHE9Q04172 SCR1SCR1 522 nt14□□□□□ -0.17
SHE9Q04172 YDJ1YNL064C 1230 nt13.98□□□□□ -0.17
SHE9Q04172 MOT3YMR070W 1473 nt13.93□□□□□ -0.18
SHE9Q04172 YNL208WYNL208W 600 nt13.91□□□□□ -0.18
SHE9Q04172 BUD23YCR047C 828 nt13.89□□□□□ -0.19
SHE9Q04172 SPT5YML010W 3192 nt13.87□□□□□ -0.19
SHE9Q04172 RRN5YLR141W 1092 nt13.85□□□□□ -0.19
SHE9Q04172 PUN1YLR414C 792 nt13.83□□□□□ -0.2
SHE9Q04172 GAR1YHR089C 618 nt13.77□□□□□ -0.21
SHE9Q04172 PTC2YER089C 1395 nt13.76□□□□□ -0.21
SHE9Q04172 YJR018WYJR018W 363 nt13.66□□□□□ -0.22
SHE9Q04172 NAB2YGL122C 1578 nt13.64□□□□□ -0.23
SHE9Q04172 SSA4YER103W 1929 nt13.64□□□□□ -0.23
SHE9Q04172 ATS1YAL020C 1002 nt13.61□□□□□ -0.23
SHE9Q04172 YER088W-BYER088W-B 147 nt13.57□□□□□ -0.24
SHE9Q04172 FIS1YIL065C 468 nt13.41□□□□□ -0.26
SHE9Q04172 RSB1YOR049C 1065 nt13.41□□□□□ -0.26
SHE9Q04172 DAL1YIR027C 1383 nt13.36□□□□□ -0.27
SHE9Q04172 YJR120WYJR120W 351 nt13.35□□□□□ -0.27
SHE9Q04172 FPR4YLR449W 1179 nt13.34□□□□□ -0.27
SHE9Q04172 MEP2YNL142W 1500 nt13.33□□□□□ -0.28
SHE9Q04172 TIR1YER011W 765 nt13.32□□□□□ -0.28
SHE9Q04172 SSA1YAL005C 1929 nt13.29□□□□□ -0.28
SHE9Q04172 PHO4YFR034C 939 nt13.25□□□□□ -0.29
SHE9Q04172 INM2YDR287W 879 nt13.23□□□□□ -0.29
SHE9Q04172 RPP2BYDR382W 333 nt13.23□□□□□ -0.29
SHE9Q04172 YPS1YLR120C 1710 nt13.17□□□□□ -0.3
SHE9Q04172 BDF1YLR399C 2061 nt13.16□□□□□ -0.3
SHE9Q04172 DCW1YKL046C 1350 nt13.13□□□□□ -0.31
SHE9Q04172 YHR165W-AYHR165W-A 312 nt13.07□□□□□ -0.32
SHE9Q04172 YBL100CYBL100C 315 nt13.03□□□□□ -0.32
SHE9Q04172 YDR095CYDR095C 411 nt13.01□□□□□ -0.33
SHE9Q04172 SRB2YHR041C 633 nt12.98□□□□□ -0.33
SHE9Q04172 TAT1YBR069C 1860 nt12.97□□□□□ -0.33
SHE9Q04172 EMI2YDR516C 1503 nt12.93□□□□□ -0.34
SHE9Q04172 BDH2YAL061W 1254 nt12.88□□□□□ -0.35
SHE9Q04172 YMR090WYMR090W 684 nt12.87□□□□□ -0.35
SHE9Q04172 YBR220CYBR220C 1683 nt12.86□□□□□ -0.35
SHE9Q04172 FUN26YAL022C 1554 nt12.86□□□□□ -0.35
SHE9Q04172 YDL221WYDL221W 552 nt12.79□□□□□ -0.36
SHE9Q04172 PTP1YDL230W 1008 nt12.78□□□□□ -0.36
SHE9Q04172 ALF1YNL148C 765 nt12.78□□□□□ -0.36
SHE9Q04172 CAC2YML102W 1407 nt12.78□□□□□ -0.36
SHE9Q04172 RPP2AYOL039W 321 nt12.76□□□□□ -0.37
SHE9Q04172 SDH1YKL148C 1923 nt12.73□□□□□ -0.37
SHE9Q04172 TRM9YML014W 840 nt12.73□□□□□ -0.37
SHE9Q04172 PST2YDR032C 597 nt12.7□□□□□ -0.38
SHE9Q04172 WWM1YFL010C 636 nt12.67□□□□□ -0.38
SHE9Q04172 CCT6YDR188W 1641 nt12.63□□□□□ -0.39
SHE9Q04172 LSM3YLR438C-A 270 nt12.61□□□□□ -0.39
SHE9Q04172 SIS1YNL007C 1059 nt12.6□□□□□ -0.39
SHE9Q04172 IRC15YPL017C 1500 nt12.58□□□□□ -0.4
SHE9Q04172 SCC4YER147C 1875 nt12.58□□□□□ -0.4
SHE9Q04172 SUF2tP(AGG)C 72 nt12.55□□□□□ -0.4
SHE9Q04172 SUF10tP(AGG)N 72 nt12.55□□□□□ -0.4
SHE9Q04172 GIS3YLR094C 1509 nt12.51□□□□□ -0.41
SHE9Q04172 PCH2YBR186W 1695 nt12.48□□□□□ -0.41
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms