Protein–RNA interactions for Protein: P43554

SWP82, SWI/SNF global transcription activator complex subunit SWP82, yeastyeast

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWP82P43554 NSR1YGR159C 1245 nt18.67■□□□□ 0.58
SWP82P43554 YML009W-BYML009W-B 477 nt18.37■□□□□ 0.53
SWP82P43554 NOP1YDL014W 984 nt17.72■□□□□ 0.43
SWP82P43554 MDJ1YFL016C 1536 nt16.93■□□□□ 0.3
SWP82P43554 YKL036CYKL036C 393 nt15.94■□□□□ 0.14
SWP82P43554 YJL027CYJL027C 417 nt15.6■□□□□ 0.09
SWP82P43554 SRX1YKL086W 384 nt15.48■□□□□ 0.07
SWP82P43554 Q0297Q0297 156 nt15.38■□□□□ 0.05
SWP82P43554 SSA3YBL075C 1950 nt14.9□□□□□ -0.02
SWP82P43554 DBP2YNL112W 1641 nt14.84□□□□□ -0.03
SWP82P43554 YCR051WYCR051W 669 nt14.62□□□□□ -0.07
SWP82P43554 YBR190WYBR190W 312 nt14.59□□□□□ -0.07
SWP82P43554 SCS3YGL126W 1143 nt14.28□□□□□ -0.12
SWP82P43554 TRN1tP(UGG)A 72 nt14.25□□□□□ -0.13
SWP82P43554 SUF9tP(UGG)F 72 nt14.25□□□□□ -0.13
SWP82P43554 SUF8tP(UGG)H 72 nt14.25□□□□□ -0.13
SWP82P43554 tP(UGG)LtP(UGG)L 72 nt14.25□□□□□ -0.13
SWP82P43554 SUF7tP(UGG)M 72 nt14.25□□□□□ -0.13
SWP82P43554 tP(UGG)N1tP(UGG)N1 72 nt14.25□□□□□ -0.13
SWP82P43554 tP(UGG)N2tP(UGG)N2 72 nt14.25□□□□□ -0.13
SWP82P43554 tP(UGG)O1tP(UGG)O1 72 nt14.25□□□□□ -0.13
SWP82P43554 SUF11tP(UGG)O2 72 nt14.25□□□□□ -0.13
SWP82P43554 RTC3YHR087W 336 nt14.19□□□□□ -0.14
SWP82P43554 CCC1YLR220W 969 nt14.05□□□□□ -0.16
SWP82P43554 RVS167YDR388W 1449 nt13.85□□□□□ -0.19
SWP82P43554 YOL085CYOL085C 342 nt13.82□□□□□ -0.2
SWP82P43554 RPP1BYDL130W 321 nt13.79□□□□□ -0.2
SWP82P43554 PUT4YOR348C 1884 nt13.78□□□□□ -0.2
SWP82P43554 SCJ1YMR214W 1134 nt13.68□□□□□ -0.22
SWP82P43554 PKP1YIL042C 1185 nt13.63□□□□□ -0.23
SWP82P43554 tP(UGG)O3tP(UGG)O3 72 nt13.33□□□□□ -0.28
SWP82P43554 ARE1YCR048W 1833 nt13.28□□□□□ -0.28
SWP82P43554 SHR5YOL110W 714 nt13.27□□□□□ -0.29
SWP82P43554 POA1YBR022W 534 nt13.24□□□□□ -0.29
SWP82P43554 PET122YER153C 765 nt13.21□□□□□ -0.29
SWP82P43554 SPT5YML010W 3192 nt13.18□□□□□ -0.3
SWP82P43554 URN1YPR152C 1398 nt13.15□□□□□ -0.3
SWP82P43554 BSC6YOL137W 1494 nt13.15□□□□□ -0.3
SWP82P43554 YHR049C-AYHR049C-A 297 nt13.11□□□□□ -0.31
SWP82P43554 SSA4YER103W 1929 nt13.1□□□□□ -0.31
SWP82P43554 OPI9YLR338W 858 nt13.07□□□□□ -0.32
SWP82P43554 SAH1YER043C 1350 nt13.07□□□□□ -0.32
SWP82P43554 DEP1YAL013W 1218 nt12.99□□□□□ -0.33
SWP82P43554 SCR1SCR1 522 nt12.96□□□□□ -0.33
SWP82P43554 YDJ1YNL064C 1230 nt12.92□□□□□ -0.34
SWP82P43554 RPN10YHR200W 807 nt12.87□□□□□ -0.35
SWP82P43554 RRN5YLR141W 1092 nt12.78□□□□□ -0.36
SWP82P43554 YNL208WYNL208W 600 nt12.78□□□□□ -0.36
SWP82P43554 BUD23YCR047C 828 nt12.72□□□□□ -0.37
SWP82P43554 BDF1YLR399C 2061 nt12.7□□□□□ -0.38
SWP82P43554 PUN1YLR414C 792 nt12.68□□□□□ -0.38
SWP82P43554 ATS1YAL020C 1002 nt12.66□□□□□ -0.38
SWP82P43554 GAR1YHR089C 618 nt12.65□□□□□ -0.38
SWP82P43554 PTC2YER089C 1395 nt12.57□□□□□ -0.4
SWP82P43554 YER088W-BYER088W-B 147 nt12.54□□□□□ -0.4
SWP82P43554 YJR018WYJR018W 363 nt12.52□□□□□ -0.41
SWP82P43554 TAT1YBR069C 1860 nt12.52□□□□□ -0.41
SWP82P43554 NAB2YGL122C 1578 nt12.5□□□□□ -0.41
SWP82P43554 MEP2YNL142W 1500 nt12.43□□□□□ -0.42
SWP82P43554 PAC11YDR488C 1602 nt12.38□□□□□ -0.43
SWP82P43554 RSB1YOR049C 1065 nt12.38□□□□□ -0.43
SWP82P43554 TIR1YER011W 765 nt12.27□□□□□ -0.45
SWP82P43554 FIS1YIL065C 468 nt12.27□□□□□ -0.45
SWP82P43554 YJR120WYJR120W 351 nt12.25□□□□□ -0.45
SWP82P43554 DAL1YIR027C 1383 nt12.25□□□□□ -0.45
SWP82P43554 SSA1YAL005C 1929 nt12.21□□□□□ -0.46
SWP82P43554 DCW1YKL046C 1350 nt12.19□□□□□ -0.46
SWP82P43554 FPR4YLR449W 1179 nt12.16□□□□□ -0.46
SWP82P43554 RPP2BYDR382W 333 nt12.15□□□□□ -0.46
SWP82P43554 INM2YDR287W 879 nt12.14□□□□□ -0.47
SWP82P43554 PHO4YFR034C 939 nt12.12□□□□□ -0.47
SWP82P43554 YBR220CYBR220C 1683 nt12.09□□□□□ -0.47
SWP82P43554 YPS1YLR120C 1710 nt12.08□□□□□ -0.47
SWP82P43554 NVJ2YPR091C 2313 nt12.04□□□□□ -0.48
SWP82P43554 EMI2YDR516C 1503 nt12.02□□□□□ -0.48
SWP82P43554 YMR090WYMR090W 684 nt12.02□□□□□ -0.49
SWP82P43554 YHR165W-AYHR165W-A 312 nt11.99□□□□□ -0.49
SWP82P43554 YBL100CYBL100C 315 nt11.95□□□□□ -0.5
SWP82P43554 Q0182Q0182 405 nt11.92□□□□□ -0.5
SWP82P43554 YDR095CYDR095C 411 nt11.91□□□□□ -0.5
SWP82P43554 SRB2YHR041C 633 nt11.91□□□□□ -0.5
SWP82P43554 SDH1YKL148C 1923 nt11.89□□□□□ -0.51
SWP82P43554 YDL221WYDL221W 552 nt11.88□□□□□ -0.51
SWP82P43554 BDH2YAL061W 1254 nt11.86□□□□□ -0.51
SWP82P43554 PCH2YBR186W 1695 nt11.85□□□□□ -0.51
SWP82P43554 GUT2YIL155C 1950 nt11.82□□□□□ -0.52
SWP82P43554 PST2YDR032C 597 nt11.81□□□□□ -0.52
SWP82P43554 SEC11YIR022W 504 nt11.79□□□□□ -0.52
SWP82P43554 FUN26YAL022C 1554 nt11.79□□□□□ -0.52
SWP82P43554 CAC2YML102W 1407 nt11.72□□□□□ -0.53
SWP82P43554 ALF1YNL148C 765 nt11.7□□□□□ -0.54
SWP82P43554 PTP1YDL230W 1008 nt11.69□□□□□ -0.54
SWP82P43554 TRM9YML014W 840 nt11.69□□□□□ -0.54
SWP82P43554 SCC4YER147C 1875 nt11.69□□□□□ -0.54
SWP82P43554 RPP2AYOL039W 321 nt11.68□□□□□ -0.54
SWP82P43554 WWM1YFL010C 636 nt11.65□□□□□ -0.54
SWP82P43554 LSM3YLR438C-A 270 nt11.64□□□□□ -0.55
SWP82P43554 CCT6YDR188W 1641 nt11.62□□□□□ -0.55
SWP82P43554 PIB2YGL023C 1908 nt11.62□□□□□ -0.55
SWP82P43554 IRC15YPL017C 1500 nt11.56□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 19.2 ms