RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C MTC1P47018 478 aaKnown RBP6.19□□□□□ -1.42
SPT4YGR063C DRS1P32892 752 aaKnown RBP5.95□□□□□ -1.46
SPT4YGR063C BFR2Q06631 534 aaKnown RBP5.41□□□□□ -1.54
SPT4YGR063C FAP1P53971 965 aa5.28□□□□□ -1.56
SPT4YGR063C RQC2Q12532 1038 aaKnown RBP5.23□□□□□ -1.57
SPT4YGR063C SPA2P23201 1466 aaKnown RBP5.18□□□□□ -1.58
SPT4YGR063C NOP2P40991 618 aaKnown RBP5.14□□□□□ -1.59
SPT4YGR063C DIP2Q12220 943 aaPredicted RBP5.14□□□□□ -1.59
SPT4YGR063C SKI3P17883 1432 aaKnown RBP5.14□□□□□ -1.59
SPT4YGR063C PRI1P10363 409 aa5.09□□□□□ -1.59
SPT4YGR063C ISW2Q08773 1120 aa5.07□□□□□ -1.6
SPT4YGR063C AVT3P36062 692 aa5.04□□□□□ -1.6
SPT4YGR063C AAD16Q02895 342 aa5.02□□□□□ -1.61
SPT4YGR063C RPG1P38249 964 aaKnown RBP4.99□□□□□ -1.61
SPT4YGR063C SSN2P38931 1420 aa4.97□□□□□ -1.61
SPT4YGR063C EBP2P36049 427 aaKnown RBP4.95□□□□□ -1.62
SPT4YGR063C CAB3P36076 571 aa4.95□□□□□ -1.62
SPT4YGR063C PRY3P47033 881 aa4.95□□□□□ -1.62
SPT4YGR063C RSE1Q04693 1361 aaKnown RBP4.92□□□□□ -1.62
SPT4YGR063C NSR1P27476 414 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62 RIP-Chip
SPT4YGR063C SGS1P35187 1447 aa4.89□□□□□ -1.63
SPT4YGR063C URN1Q06525 465 aaKnown RBP4.85□□□□□ -1.63
SPT4YGR063C TCB3Q03640 1545 aaKnown RBP4.83□□□□□ -1.64
SPT4YGR063C CHD1P32657 1468 aa4.81□□□□□ -1.64
SPT4YGR063C SIS2P36024 562 aa4.8□□□□□ -1.64
SPT4YGR063C TSR3Q12094 313 aaKnown RBP4.79□□□□□ -1.64
SPT4YGR063C INO80P53115 1489 aa4.77□□□□□ -1.65
SPT4YGR063C RPL17AP05740 184 aaKnown RBP4.75□□□□□ -1.65
SPT4YGR063C RPL17BP46990 184 aaKnown RBP4.75□□□□□ -1.65
SPT4YGR063C MMS22Q06164 1454 aa4.73□□□□□ -1.65
SPT4YGR063C ENP1P38333 483 aaKnown RBP4.72□□□□□ -1.65
SPT4YGR063C YCK3P39962 524 aa4.72□□□□□ -1.65
SPT4YGR063C UFD4P33202 1483 aa4.71□□□□□ -1.66
SPT4YGR063C REB1P21538 810 aa4.71□□□□□ -1.66
SPT4YGR063C YPR148CQ06523 435 aa4.71□□□□□ -1.66
SPT4YGR063C HAA1Q12753 694 aaKnown RBP4.68□□□□□ -1.66
SPT4YGR063C STH1P32597 1359 aa4.67□□□□□ -1.66
SPT4YGR063C TFA1P36100 482 aa4.67□□□□□ -1.66
SPT4YGR063C SPP41P38904 1435 aa4.66□□□□□ -1.66
SPT4YGR063C TCB2P48231 1178 aa4.65□□□□□ -1.67
SPT4YGR063C TAF7Q05021 590 aa4.65□□□□□ -1.67
SPT4YGR063C XRN1P22147 1528 aaKnown RBP4.64□□□□□ -1.67
SPT4YGR063C MRPL32P25348 183 aa4.62□□□□□ -1.67
SPT4YGR063C SEC3P33332 1336 aaKnown RBP4.61□□□□□ -1.67
SPT4YGR063C ECM5Q03214 1411 aa4.6□□□□□ -1.67
SPT4YGR063C SPT21P35209 758 aa4.59□□□□□ -1.67
SPT4YGR063C MNN4P36044 1178 aa4.59□□□□□ -1.67
SPT4YGR063C YFR016CP43597 1233 aaKnown RBP4.57□□□□□ -1.68
SPT4YGR063C RPS0BP46654 252 aaKnown RBP4.57□□□□□ -1.68
SPT4YGR063C MON2P48563 1636 aaPredicted RBP4.57□□□□□ -1.68
SPT4YGR063C QCR6P00127 147 aa4.55□□□□□ -1.68
SPT4YGR063C RLF2Q12495 606 aa4.55□□□□□ -1.68
SPT4YGR063C TRM732Q03496 1420 aa4.55□□□□□ -1.68
SPT4YGR063C PEP1P32319 1579 aa4.54□□□□□ -1.68
SPT4YGR063C NUP170P38181 1502 aa4.54□□□□□ -1.68
SPT4YGR063C IKI3Q06706 1349 aaKnown RBP4.53□□□□□ -1.68
SPT4YGR063C CLC1P17891 233 aa4.53□□□□□ -1.68
SPT4YGR063C POL5P39985 1022 aaKnown RBP4.52□□□□□ -1.69
SPT4YGR063C IME2P32581 645 aa4.51□□□□□ -1.69
SPT4YGR063C PRS1P32895 427 aaKnown RBP4.51□□□□□ -1.69
SPT4YGR063C NOP53Q12080 455 aaKnown RBP4.49□□□□□ -1.69
SPT4YGR063C SPT7P35177 1332 aa4.47□□□□□ -1.69
SPT4YGR063C RIM101P33400 625 aa4.47□□□□□ -1.69
SPT4YGR063C YKR023WP36119 530 aaKnown RBP4.47□□□□□ -1.69
SPT4YGR063C TOP2P06786 1428 aaKnown RBP4.46□□□□□ -1.69
SPT4YGR063C SRB8P25648 1427 aa4.46□□□□□ -1.69
SPT4YGR063C BUD4P47136 1447 aa4.46□□□□□ -1.7
SPT4YGR063C YLR419WQ06698 1435 aaKnown RBP4.46□□□□□ -1.7
SPT4YGR063C LEO1P38439 464 aa4.45□□□□□ -1.7
SPT4YGR063C RIX1P38883 763 aaPredicted RBP4.45□□□□□ -1.7
SPT4YGR063C YRB30P53107 440 aaPredicted RBP4.45□□□□□ -1.7
SPT4YGR063C FPR3P38911 411 aaKnown RBP4.44□□□□□ -1.7
SPT4YGR063C YGR130CP53278 816 aa4.44□□□□□ -1.7
SPT4YGR063C STU1P38198 1513 aa4.44□□□□□ -1.7
SPT4YGR063C MYO2P19524 1574 aaKnown RBP4.44□□□□□ -1.7
SPT4YGR063C THO2P53552 1597 aaKnown RBP4.44□□□□□ -1.7
SPT4YGR063C IRC20Q06554 1556 aa4.44□□□□□ -1.7
SPT4YGR063C CDC27P38042 758 aa4.43□□□□□ -1.7
SPT4YGR063C OPY1P38271 328 aa4.43□□□□□ -1.7
SPT4YGR063C EAF7P53911 425 aaKnown RBP4.43□□□□□ -1.7
SPT4YGR063C NUG1P40010 520 aaKnown RBP4.42□□□□□ -1.7
SPT4YGR063C PDR10P51533 1564 aa4.42□□□□□ -1.7
SPT4YGR063C AIM44Q99299 758 aa4.42□□□□□ -1.7
SPT4YGR063C MLP2P40457 1679 aa4.41□□□□□ -1.7
SPT4YGR063C YTA7P40340 1379 aa4.41□□□□□ -1.7
SPT4YGR063C SNF7P39929 240 aaKnown RBP4.41□□□□□ -1.7
SPT4YGR063C SIN3P22579 1536 aa4.41□□□□□ -1.7
SPT4YGR063C CWC22P53333 577 aaKnown RBP4.4□□□□□ -1.71
SPT4YGR063C MYO4P32492 1471 aa4.39□□□□□ -1.71
SPT4YGR063C YPK9Q12697 1472 aa4.39□□□□□ -1.71
SPT4YGR063C TFC8Q12308 588 aa4.39□□□□□ -1.71
SPT4YGR063C SSM4P40318 1319 aa4.39□□□□□ -1.71
SPT4YGR063C SMC4Q12267 1418 aa4.38□□□□□ -1.71
SPT4YGR063C DEF1P35732 738 aaKnown RBP4.38□□□□□ -1.71
SPT4YGR063C CFT1Q06632 1357 aaKnown RBP4.38□□□□□ -1.71
SPT4YGR063C MMS1Q06211 1407 aa4.38□□□□□ -1.71
SPT4YGR063C POL1P13382 1468 aa4.37□□□□□ -1.71
SPT4YGR063C SPT6P23615 1451 aaKnown RBP4.37□□□□□ -1.71
SPT4YGR063C YGL015CP33199 130 aa4.37□□□□□ -1.71
SPT4YGR063C YIR014WP40570 242 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms