RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C STM1P39015 273 aaKnown RBP3.96□□□□□ -1.78
SHQ1YIL104C ACA1P39970 489 aa3.96□□□□□ -1.78
SHQ1YIL104C YJL007CP47080 104 aa3.96□□□□□ -1.78
SHQ1YIL104C YNL108CP53929 270 aa3.96□□□□□ -1.78
SHQ1YIL104C ECM16Q04217 1267 aaKnown RBP3.96□□□□□ -1.78
SHQ1YIL104C YPL260WQ08977 551 aa3.96□□□□□ -1.78
SHQ1YIL104C Q0182Q9ZZW1 134 aa3.96□□□□□ -1.78
SHQ1YIL104C RPC31P17890 251 aa3.95□□□□□ -1.78
SHQ1YIL104C SRP54P20424 541 aaKnown RBP3.95□□□□□ -1.78
SHQ1YIL104C SRM1P21827 482 aa3.95□□□□□ -1.78
SHQ1YIL104C ANP1P32629 500 aa3.95□□□□□ -1.78
SHQ1YIL104C RER2P35196 286 aa3.95□□□□□ -1.78
SHQ1YIL104C CSM2P40465 213 aa3.95□□□□□ -1.78
SHQ1YIL104C RIM21P48565 533 aa3.95□□□□□ -1.78
SHQ1YIL104C MTO1P53070 669 aa3.95□□□□□ -1.78
SHQ1YIL104C ARI1P53111 347 aaKnown RBP3.95□□□□□ -1.78
SHQ1YIL104C FPR4Q06205 392 aaPredicted RBP3.95□□□□□ -1.78
SHQ1YIL104C TUS1Q06412 1307 aa3.95□□□□□ -1.78
SHQ1YIL104C PKC1P24583 1151 aa3.95□□□□□ -1.78
SHQ1YIL104C COQ2P32378 372 aa3.95□□□□□ -1.78
SHQ1YIL104C SFA1P32771 386 aa3.95□□□□□ -1.78
SHQ1YIL104C RRM3P38766 723 aa3.95□□□□□ -1.78
SHQ1YIL104C CIC1P38779 376 aaKnown RBP3.95□□□□□ -1.78
SHQ1YIL104C CRG1P38892 291 aaRIP-Chip data3.95□□□□□ -1.78not detected
SHQ1YIL104C MSH4P40965 878 aaPredicted RBP3.95□□□□□ -1.78
SHQ1YIL104C AVT1P47082 602 aa3.95□□□□□ -1.78
SHQ1YIL104C SKP1P52286 194 aa3.95□□□□□ -1.78
SHQ1YIL104C RRT6P53117 311 aaPredicted RBP3.95□□□□□ -1.78
SHQ1YIL104C MYO5Q04439 1219 aaKnown RBP3.95□□□□□ -1.78
SHQ1YIL104C SUE1Q06524 206 aa3.95□□□□□ -1.78
SHQ1YIL104C MED7Q08278 222 aa3.95□□□□□ -1.78
SHQ1YIL104C LAP2Q10740 671 aa3.95□□□□□ -1.78
SHQ1YIL104C GAL2P13181 574 aa3.94□□□□□ -1.78
SHQ1YIL104C APE3P37302 537 aaKnown RBP3.94□□□□□ -1.78
SHQ1YIL104C NDT80P38830 627 aa3.94□□□□□ -1.78
SHQ1YIL104C UFD2P54860 961 aa3.94□□□□□ -1.78
SHQ1YIL104C SPN1Q06505 410 aaPredicted RBP3.94□□□□□ -1.78
SHQ1YIL104C GIN4Q12263 1142 aa3.94□□□□□ -1.78
SHQ1YIL104C PHR1P05066 565 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SHQ1YIL104C NUC1P08466 329 aa3.93□□□□□ -1.78
SHQ1YIL104C RDS2P19541 446 aaKnown RBP3.93□□□□□ -1.78
SHQ1YIL104C RIT1P23796 513 aa3.93□□□□□ -1.78
SHQ1YIL104C IMP2'P32351 346 aa3.93□□□□□ -1.78
SHQ1YIL104C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SHQ1YIL104C KAE1P36132 386 aa3.93□□□□□ -1.78
SHQ1YIL104C CST26P38226 397 aa3.93□□□□□ -1.78
SHQ1YIL104C CTR1P49573 406 aa3.93□□□□□ -1.78
SHQ1YIL104C TMA64Q04600 565 aaKnown RBP3.93□□□□□ -1.78
SHQ1YIL104C TFC6Q06339 672 aa3.93□□□□□ -1.78
SHQ1YIL104C UTP4Q06679 776 aaKnown RBP3.93□□□□□ -1.78
SHQ1YIL104C UBX5Q06682 500 aa3.93□□□□□ -1.78
SHQ1YIL104C CYT1P07143 309 aa3.92□□□□□ -1.78
SHQ1YIL104C MAK31P23059 88 aa3.92□□□□□ -1.78
SHQ1YIL104C PEP3P27801 918 aa3.92□□□□□ -1.78
SHQ1YIL104C BSD2P38356 321 aa3.92□□□□□ -1.78
SHQ1YIL104C AKR1P39010 764 aa3.92□□□□□ -1.78
SHQ1YIL104C VID28P40547 921 aa3.92□□□□□ -1.78
SHQ1YIL104C FOL1P53848 824 aa3.92□□□□□ -1.78
SHQ1YIL104C YML037CQ03703 340 aa3.92□□□□□ -1.78
SHQ1YIL104C RBA50Q04418 439 aa3.92□□□□□ -1.78
SHQ1YIL104C MRD1Q06106 887 aaKnown RBP3.92□□□□□ -1.78
SHQ1YIL104C SSF2Q12153 453 aaPredicted RBP3.92□□□□□ -1.78
SHQ1YIL104C TSC13Q99190 310 aa3.92□□□□□ -1.78
SHQ1YIL104C VPS1P21576 704 aaKnown RBP3.91□□□□□ -1.78
SHQ1YIL104C TGL1P34163 548 aa3.91□□□□□ -1.78
SHQ1YIL104C OCT1P35999 772 aa3.91□□□□□ -1.78
SHQ1YIL104C VPS8P39702 1274 aa3.91□□□□□ -1.78
SHQ1YIL104C YIR014WP40570 242 aa3.91□□□□□ -1.78
SHQ1YIL104C SCS3P53012 380 aa3.91□□□□□ -1.78
SHQ1YIL104C RPT6Q01939 405 aaKnown RBP3.91□□□□□ -1.78
SHQ1YIL104C CUS1Q02554 436 aaPredicted RBP3.91□□□□□ -1.78
SHQ1YIL104C DSE3Q08729 430 aa3.91□□□□□ -1.78
SHQ1YIL104C TIF6Q12522 245 aaKnown RBP3.91□□□□□ -1.78
SHQ1YIL104C YOR111WQ99210 232 aa3.91□□□□□ -1.78
SHQ1YIL104C RAD18P10862 487 aa3.9□□□□□ -1.78
SHQ1YIL104C MBR1P23493 339 aa3.9□□□□□ -1.78
SHQ1YIL104C RSC6P25632 483 aa3.9□□□□□ -1.78
SHQ1YIL104C KAP122P32767 1081 aa3.9□□□□□ -1.78
SHQ1YIL104C LIP5P32875 414 aa3.9□□□□□ -1.78
SHQ1YIL104C APM2P38700 605 aa3.9□□□□□ -1.78
SHQ1YIL104C EPL1P43572 832 aa3.9□□□□□ -1.78
SHQ1YIL104C NET1P47035 1189 aa3.9□□□□□ -1.78
SHQ1YIL104C ASE1P50275 885 aa3.9□□□□□ -1.78
SHQ1YIL104C MDM1Q01846 1127 aa3.9□□□□□ -1.78
SHQ1YIL104C YLR407WQ06070 228 aa3.9□□□□□ -1.78
SHQ1YIL104C SLP1Q12232 587 aa3.9□□□□□ -1.78
SHQ1YIL104C MET6P05694 767 aaKnown RBP3.9□□□□□ -1.79
SHQ1YIL104C STI1P15705 589 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
SHQ1YIL104C SWI4P25302 1093 aaKnown RBP3.9□□□□□ -1.79
SHQ1YIL104C UTR4P32626 227 aa3.9□□□□□ -1.79
SHQ1YIL104C SHP1P34223 423 aa3.9□□□□□ -1.79
SHQ1YIL104C SCD5P34758 872 aa3.9□□□□□ -1.79
SHQ1YIL104C YKR073CP36153 106 aa3.9□□□□□ -1.79
SHQ1YIL104C OPY1P38271 328 aa3.9□□□□□ -1.79
SHQ1YIL104C ERG7P38604 731 aa3.9□□□□□ -1.79
SHQ1YIL104C RRP8P38961 392 aaKnown RBP3.9□□□□□ -1.79
SHQ1YIL104C PCI8P40512 444 aa3.9□□□□□ -1.79
SHQ1YIL104C SNU71P53207 620 aaKnown RBP3.9□□□□□ -1.79
SHQ1YIL104C VPS30Q02948 557 aa3.9□□□□□ -1.79
SHQ1YIL104C EST2Q06163 884 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms