Protein–RNA interactions for Protein: Q02554

CUS1, Cold sensitive U2 snRNA suppressor 1, yeastyeast

Predicted RBP Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUS1Q02554 YML009W-BYML009W-B 477 nt22.52■■□□□ 1.2
CUS1Q02554 NOP1YDL014W 984 nt22■■□□□ 1.11
CUS1Q02554 NSR1YGR159C 1245 nt21.99■■□□□ 1.11
CUS1Q02554 YKL036CYKL036C 393 nt20.62■□□□□ 0.89
CUS1Q02554 YJL027CYJL027C 417 nt19.35■□□□□ 0.69
CUS1Q02554 Q0297Q0297 156 nt19.33■□□□□ 0.68
CUS1Q02554 MDJ1YFL016C 1536 nt19.26■□□□□ 0.67
CUS1Q02554 SRX1YKL086W 384 nt19.19■□□□□ 0.66
CUS1Q02554 SCS3YGL126W 1143 nt18.94■□□□□ 0.62
CUS1Q02554 YCR051WYCR051W 669 nt18.31■□□□□ 0.52
CUS1Q02554 YOL085CYOL085C 342 nt17.84■□□□□ 0.45
CUS1Q02554 PKP1YIL042C 1185 nt17.59■□□□□ 0.41
CUS1Q02554 RPP1BYDL130W 321 nt17.37■□□□□ 0.37
CUS1Q02554 SCJ1YMR214W 1134 nt17.16■□□□□ 0.34
CUS1Q02554 TRN1tP(UGG)A 72 nt17.14■□□□□ 0.33
CUS1Q02554 SUF9tP(UGG)F 72 nt17.14■□□□□ 0.33
CUS1Q02554 SUF8tP(UGG)H 72 nt17.14■□□□□ 0.33
CUS1Q02554 tP(UGG)LtP(UGG)L 72 nt17.14■□□□□ 0.33
CUS1Q02554 SUF7tP(UGG)M 72 nt17.14■□□□□ 0.33
CUS1Q02554 tP(UGG)N1tP(UGG)N1 72 nt17.14■□□□□ 0.33
CUS1Q02554 tP(UGG)N2tP(UGG)N2 72 nt17.14■□□□□ 0.33
CUS1Q02554 tP(UGG)O1tP(UGG)O1 72 nt17.14■□□□□ 0.33
CUS1Q02554 SUF11tP(UGG)O2 72 nt17.14■□□□□ 0.33
CUS1Q02554 DBP2YNL112W 1641 nt17.11■□□□□ 0.33
CUS1Q02554 CCC1YLR220W 969 nt17.06■□□□□ 0.32
CUS1Q02554 ATS1YAL020C 1002 nt17.03■□□□□ 0.32
CUS1Q02554 PET122YER153C 765 nt16.57■□□□□ 0.24
CUS1Q02554 SCR1SCR1 522 nt16.51■□□□□ 0.23
CUS1Q02554 tP(UGG)O3tP(UGG)O3 72 nt16.36■□□□□ 0.21
CUS1Q02554 YBR190WYBR190W 312 nt16.28■□□□□ 0.2
CUS1Q02554 RVS167YDR388W 1449 nt16.25■□□□□ 0.19
CUS1Q02554 RRN5YLR141W 1092 nt16.14■□□□□ 0.17
CUS1Q02554 RTC3YHR087W 336 nt16.03■□□□□ 0.16
CUS1Q02554 RSB1YOR049C 1065 nt15.94■□□□□ 0.14
CUS1Q02554 SSA3YBL075C 1950 nt15.83■□□□□ 0.12
CUS1Q02554 YER088W-BYER088W-B 147 nt15.81■□□□□ 0.12
CUS1Q02554 YDJ1YNL064C 1230 nt15.79■□□□□ 0.12
CUS1Q02554 SHR5YOL110W 714 nt15.73■□□□□ 0.11
CUS1Q02554 PST2YDR032C 597 nt15.68■□□□□ 0.1
CUS1Q02554 GAR1YHR089C 618 nt15.45■□□□□ 0.06
CUS1Q02554 YKL097CYKL097C 411 nt15.3■□□□□ 0.04
CUS1Q02554 DEP1YAL013W 1218 nt15.23■□□□□ 0.03
CUS1Q02554 URN1YPR152C 1398 nt15.1■□□□□ 0.01
CUS1Q02554 SHU1YHL006C 453 nt15□□□□□ -0.01
CUS1Q02554 YNL208WYNL208W 600 nt14.98□□□□□ -0.01
CUS1Q02554 RPN10YHR200W 807 nt14.96□□□□□ -0.01
CUS1Q02554 TIR1YER011W 765 nt14.89□□□□□ -0.03
CUS1Q02554 OPI9YLR338W 858 nt14.76□□□□□ -0.05
CUS1Q02554 YAL037C-BYAL037C-B 975 nt14.7□□□□□ -0.06
CUS1Q02554 SSA1YAL005C 1929 nt14.62□□□□□ -0.07
CUS1Q02554 PUT4YOR348C 1884 nt14.61□□□□□ -0.07
CUS1Q02554 SAH1YER043C 1350 nt14.6□□□□□ -0.07
CUS1Q02554 YOR139CYOR139C 393 nt14.58□□□□□ -0.08
CUS1Q02554 NPL3YDR432W 1245 nt14.45□□□□□ -0.1
CUS1Q02554 SRB2YHR041C 633 nt14.43□□□□□ -0.1
CUS1Q02554 YJR018WYJR018W 363 nt14.41□□□□□ -0.1
CUS1Q02554 PUN1YLR414C 792 nt14.36□□□□□ -0.11
CUS1Q02554 ARE1YCR048W 1833 nt14.35□□□□□ -0.11
CUS1Q02554 YGR021WYGR021W 873 nt14.32□□□□□ -0.12
CUS1Q02554 WWM1YFL010C 636 nt14.3□□□□□ -0.12
CUS1Q02554 MNP1YGL068W 585 nt14.3□□□□□ -0.12
CUS1Q02554 RPP2BYDR382W 333 nt14.26□□□□□ -0.13
CUS1Q02554 HOM6YJR139C 1080 nt14.26□□□□□ -0.13
CUS1Q02554 YHR049C-AYHR049C-A 297 nt14.22□□□□□ -0.13
CUS1Q02554 YJR120WYJR120W 351 nt14.21□□□□□ -0.13
CUS1Q02554 YOL037CYOL037C 354 nt14.16□□□□□ -0.14
CUS1Q02554 PTC2YER089C 1395 nt14.14□□□□□ -0.15
CUS1Q02554 POA1YBR022W 534 nt14.13□□□□□ -0.15
CUS1Q02554 RKM5YLR137W 1104 nt14.07□□□□□ -0.16
CUS1Q02554 YFL021C-AYFL021C-A 855 nt14.04□□□□□ -0.16
CUS1Q02554 tM(CAU)CtM(CAU)C 72 nt13.99□□□□□ -0.17
CUS1Q02554 IMT4tM(CAU)E 72 nt13.99□□□□□ -0.17
CUS1Q02554 IMT3tM(CAU)J3 72 nt13.99□□□□□ -0.17
CUS1Q02554 IMT1tM(CAU)O1 72 nt13.99□□□□□ -0.17
CUS1Q02554 IMT2tM(CAU)P 72 nt13.99□□□□□ -0.17
CUS1Q02554 BDH2YAL061W 1254 nt13.98□□□□□ -0.17
CUS1Q02554 SPT5YML010W 3192 nt13.97□□□□□ -0.17
CUS1Q02554 BUD23YCR047C 828 nt13.96□□□□□ -0.17
CUS1Q02554 BSC6YOL137W 1494 nt13.95□□□□□ -0.18
CUS1Q02554 SSA4YER103W 1929 nt13.9□□□□□ -0.18
CUS1Q02554 NAB2YGL122C 1578 nt13.88□□□□□ -0.19
CUS1Q02554 INM2YDR287W 879 nt13.84□□□□□ -0.19
CUS1Q02554 LSM3YLR438C-A 270 nt13.84□□□□□ -0.19
CUS1Q02554 FPR4YLR449W 1179 nt13.84□□□□□ -0.19
CUS1Q02554 PUS2YGL063W 1113 nt13.82□□□□□ -0.2
CUS1Q02554 YBL100CYBL100C 315 nt13.8□□□□□ -0.2
CUS1Q02554 YLR281CYLR281C 468 nt13.79□□□□□ -0.2
CUS1Q02554 DAL1YIR027C 1383 nt13.78□□□□□ -0.2
CUS1Q02554 WHI5YOR083W 888 nt13.73□□□□□ -0.21
CUS1Q02554 FIS1YIL065C 468 nt13.71□□□□□ -0.21
CUS1Q02554 Q0182Q0182 405 nt13.69□□□□□ -0.22
CUS1Q02554 TRM9YML014W 840 nt13.69□□□□□ -0.22
CUS1Q02554 PHO4YFR034C 939 nt13.66□□□□□ -0.22
CUS1Q02554 FUN26YAL022C 1554 nt13.63□□□□□ -0.23
CUS1Q02554 MOT3YMR070W 1473 nt13.61□□□□□ -0.23
CUS1Q02554 FMP45YDL222C 930 nt13.49□□□□□ -0.25
CUS1Q02554 DSK2YMR276W 1122 nt13.48□□□□□ -0.25
CUS1Q02554 CCT6YDR188W 1641 nt13.48□□□□□ -0.25
CUS1Q02554 BDF1YLR399C 2061 nt13.48□□□□□ -0.25
CUS1Q02554 YLR154C-GYLR154C-G 150 nt13.46□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms