RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C MTC1P47018 478 aaKnown RBP10.1□□□□□ -0.79
SHQ1YIL104C FAP1P53971 965 aa9.68□□□□□ -0.86
SHQ1YIL104C PRY3P47033 881 aa9.1□□□□□ -0.95
SHQ1YIL104C DRS1P32892 752 aaKnown RBP8.91□□□□□ -0.98
SHQ1YIL104C AAD16Q02895 342 aa8.83□□□□□ -1
SHQ1YIL104C PRI1P10363 409 aa8.8□□□□□ -1
SHQ1YIL104C HAA1Q12753 694 aaKnown RBP8.55□□□□□ -1.04
SHQ1YIL104C ISW2Q08773 1120 aa8.52□□□□□ -1.05
SHQ1YIL104C YCK3P39962 524 aa8.49□□□□□ -1.05
SHQ1YIL104C RPG1P38249 964 aaKnown RBP8.41□□□□□ -1.06
SHQ1YIL104C TSR3Q12094 313 aaKnown RBP8.27□□□□□ -1.09
SHQ1YIL104C MRPL32P25348 183 aa8.01□□□□□ -1.13
SHQ1YIL104C DIP2Q12220 943 aaPredicted RBP8□□□□□ -1.13
SHQ1YIL104C RSE1Q04693 1361 aaKnown RBP7.91□□□□□ -1.14
SHQ1YIL104C YGL015CP33199 130 aa7.83□□□□□ -1.16
SHQ1YIL104C REB1P21538 810 aa7.71□□□□□ -1.18
SHQ1YIL104C RPL17AP05740 184 aaKnown RBP7.68□□□□□ -1.18
SHQ1YIL104C RPL17BP46990 184 aaKnown RBP7.68□□□□□ -1.18
SHQ1YIL104C AVT3P36062 692 aa7.56□□□□□ -1.2
SHQ1YIL104C CDC27P38042 758 aa7.45□□□□□ -1.22
SHQ1YIL104C BUD31P25337 157 aaPredicted RBP7.37□□□□□ -1.23
SHQ1YIL104C UBP10P53874 792 aaPredicted RBP7.37□□□□□ -1.23
SHQ1YIL104C YKR023WP36119 530 aaKnown RBP7.31□□□□□ -1.24
SHQ1YIL104C MAP2P38174 421 aaKnown RBP7.28□□□□□ -1.24
SHQ1YIL104C SPT21P35209 758 aa7.27□□□□□ -1.25
SHQ1YIL104C BFR2Q06631 534 aaKnown RBP7.18□□□□□ -1.26
SHQ1YIL104C TFC8Q12308 588 aa7.17□□□□□ -1.26
SHQ1YIL104C HOP09932 586 aa7.16□□□□□ -1.26
SHQ1YIL104C DCD1P06773 312 aa7.11□□□□□ -1.27
SHQ1YIL104C TIF4632P39936 914 aaKnown RBP7.1□□□□□ -1.27
SHQ1YIL104C SCY1P53009 804 aa7.06□□□□□ -1.28
SHQ1YIL104C TGL3P40308 642 aa7.06□□□□□ -1.28
SHQ1YIL104C SLX5P32828 619 aaKnown RBP7.03□□□□□ -1.28
SHQ1YIL104C UBP9P39967 754 aa7.03□□□□□ -1.28
SHQ1YIL104C SIS1P25294 352 aaKnown RBP7□□□□□ -1.29
SHQ1YIL104C RIM101P33400 625 aa6.93□□□□□ -1.3
SHQ1YIL104C BCH2P36122 765 aa6.91□□□□□ -1.3
SHQ1YIL104C EPS1P40557 701 aa6.71□□□□□ -1.33
SHQ1YIL104C BDF1P35817 686 aa6.7□□□□□ -1.34
SHQ1YIL104C MST1P07236 462 aa6.67□□□□□ -1.34
SHQ1YIL104C YOR238WQ08634 303 aa6.66□□□□□ -1.34
SHQ1YIL104C OXP1P28273 1286 aa6.65□□□□□ -1.35
SHQ1YIL104C YIL055CP40523 627 aaKnown RBP6.62□□□□□ -1.35
SHQ1YIL104C YBL029C-AQ3E756 94 aa6.62□□□□□ -1.35
SHQ1YIL104C PTP3P40048 928 aa6.61□□□□□ -1.35
SHQ1YIL104C INO80P53115 1489 aa6.61□□□□□ -1.35
SHQ1YIL104C MON2P48563 1636 aaPredicted RBP6.6□□□□□ -1.35
SHQ1YIL104C NSR1P27476 414 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
SHQ1YIL104C VNX1P42839 908 aa6.55□□□□□ -1.36
SHQ1YIL104C BBC1P47068 1157 aa6.55□□□□□ -1.36
SHQ1YIL104C SGS1P35187 1447 aa6.55□□□□□ -1.36
SHQ1YIL104C YAP5P40574 245 aa6.54□□□□□ -1.36
SHQ1YIL104C SPP1Q03012 353 aa6.51□□□□□ -1.37
SHQ1YIL104C RSM7P47150 247 aa6.5□□□□□ -1.37
SHQ1YIL104C AI2P03876 854 aa6.48□□□□□ -1.37
SHQ1YIL104C WSC3Q12215 556 aa6.46□□□□□ -1.37
SHQ1YIL104C TIF11P38912 153 aaKnown RBP6.42□□□□□ -1.38
SHQ1YIL104C GTT3P39996 337 aa6.42□□□□□ -1.38
SHQ1YIL104C YJL171CP46992 396 aa6.42□□□□□ -1.38
SHQ1YIL104C TCB3Q03640 1545 aaKnown RBP6.41□□□□□ -1.38
SHQ1YIL104C YAH1Q12184 172 aaKnown RBP6.4□□□□□ -1.38
SHQ1YIL104C AIR2Q12476 344 aaKnown RBP6.4□□□□□ -1.39
SHQ1YIL104C SWR1Q05471 1514 aa6.39□□□□□ -1.39
SHQ1YIL104C FKH1P40466 484 aa6.38□□□□□ -1.39
SHQ1YIL104C TY1B-DR4Q07793 1604 aa6.38□□□□□ -1.39
SHQ1YIL104C DNA2P38859 1522 aa6.35□□□□□ -1.39
SHQ1YIL104C ULI1P43604 169 aa6.3□□□□□ -1.4
SHQ1YIL104C LDB19Q12502 818 aa6.3□□□□□ -1.4
SHQ1YIL104C BMT6Q12291 365 aa6.29□□□□□ -1.4
SHQ1YIL104C IOC2Q12072 812 aa6.28□□□□□ -1.4
SHQ1YIL104C YLR271WQ06152 274 aa6.26□□□□□ -1.41
SHQ1YIL104C TFA1P36100 482 aa6.25□□□□□ -1.41
SHQ1YIL104C PIB1Q06651 286 aa6.25□□□□□ -1.41
SHQ1YIL104C MSB4Q12317 492 aa6.25□□□□□ -1.41
SHQ1YIL104C EAP1P36041 632 aaKnown RBP6.24□□□□□ -1.41
SHQ1YIL104C PSD2P53037 1138 aaKnown RBP6.24□□□□□ -1.41
SHQ1YIL104C HSL1P34244 1518 aa6.21□□□□□ -1.42
SHQ1YIL104C MRM1P25270 412 aa6.2□□□□□ -1.42
SHQ1YIL104C SPT6P23615 1451 aaKnown RBP6.19□□□□□ -1.42
SHQ1YIL104C RTG1P32607 177 aa6.16□□□□□ -1.42
SHQ1YIL104C KOG1P38873 1557 aa6.16□□□□□ -1.42
SHQ1YIL104C YOL036WQ08206 761 aa6.15□□□□□ -1.42
SHQ1YIL104C SET4P42948 560 aa6.15□□□□□ -1.43
SHQ1YIL104C NCR1Q12200 1170 aa6.15□□□□□ -1.43
SHQ1YIL104C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.15□□□□□ -1.43not detected
SHQ1YIL104C TRP5P00931 707 aaKnown RBP6.14□□□□□ -1.43
SHQ1YIL104C YMR1P47147 688 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
SHQ1YIL104C SEC61P32915 480 aa6.11□□□□□ -1.43
SHQ1YIL104C YNL035CP53962 389 aaKnown RBP6.11□□□□□ -1.43
SHQ1YIL104C SSN2P38931 1420 aa6.1□□□□□ -1.43
SHQ1YIL104C DBP1P24784 617 aaKnown RBP6.09□□□□□ -1.43
SHQ1YIL104C HIR3P47171 1648 aa6.09□□□□□ -1.43
SHQ1YIL104C SSP1P38871 571 aa6.09□□□□□ -1.44
SHQ1YIL104C TFG1P41895 735 aaPredicted RBP6.08□□□□□ -1.44
SHQ1YIL104C SPA2P23201 1466 aaKnown RBP6.07□□□□□ -1.44
SHQ1YIL104C RTG3P38165 486 aa6.07□□□□□ -1.44
SHQ1YIL104C VPS29P38759 282 aa6.07□□□□□ -1.44
SHQ1YIL104C VMA1P17255 1071 aaKnown RBP6.06□□□□□ -1.44
SHQ1YIL104C SAM3Q08986 587 aa6.06□□□□□ -1.44
SHQ1YIL104C ECM5Q03214 1411 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms