Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.53■■■■□ 3.12
SPTBN4Q9H254 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.26■■■■□ 3.07
SPTBN4Q9H254 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
SPTBN4Q9H254 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.47■■■□□ 2.95
SPTBN4Q9H254 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.4■■■□□ 2.94
SPTBN4Q9H254 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
SPTBN4Q9H254 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
SPTBN4Q9H254 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.94■■■□□ 2.86
SPTBN4Q9H254 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.84■■■□□ 2.85
SPTBN4Q9H254 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.79■■■□□ 2.84
SPTBN4Q9H254 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SPTBN4Q9H254 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.47■■■□□ 2.79
SPTBN4Q9H254 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SPTBN4Q9H254 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SPTBN4Q9H254 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SPTBN4Q9H254 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.1■■■□□ 2.73
SPTBN4Q9H254 AC006077.2-201ENST00000623591 457 ntBASIC32.01■■■□□ 2.71
SPTBN4Q9H254 ZNRF2P1-201ENST00000441407 443 ntBASIC31.91■■■□□ 2.7
SPTBN4Q9H254 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
SPTBN4Q9H254 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
SPTBN4Q9H254 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
SPTBN4Q9H254 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.79■■■□□ 2.68
SPTBN4Q9H254 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SPTBN4Q9H254 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SPTBN4Q9H254 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
SPTBN4Q9H254 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.59■■■□□ 2.65
SPTBN4Q9H254 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SPTBN4Q9H254 AL356512.1-201ENST00000607453 1739 ntBASIC31.52■■■□□ 2.64
SPTBN4Q9H254 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.52■■■□□ 2.64
SPTBN4Q9H254 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
SPTBN4Q9H254 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
SPTBN4Q9H254 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SPTBN4Q9H254 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.24■■■□□ 2.59
SPTBN4Q9H254 AP002365.1-201ENST00000603448 772 ntBASIC31.14■■■□□ 2.58
SPTBN4Q9H254 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.05■■■□□ 2.56
SPTBN4Q9H254 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31■■■□□ 2.55
SPTBN4Q9H254 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.98■■■□□ 2.55
SPTBN4Q9H254 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SPTBN4Q9H254 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
SPTBN4Q9H254 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.88■■■□□ 2.53
SPTBN4Q9H254 AC015813.7-201ENST00000623294 581 ntBASIC30.83■■■□□ 2.53
SPTBN4Q9H254 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.81■■■□□ 2.52
SPTBN4Q9H254 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
SPTBN4Q9H254 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.75■■■□□ 2.51
SPTBN4Q9H254 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
SPTBN4Q9H254 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.72■■■□□ 2.51
SPTBN4Q9H254 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.68■■■□□ 2.5
SPTBN4Q9H254 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SPTBN4Q9H254 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SPTBN4Q9H254 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SPTBN4Q9H254 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SPTBN4Q9H254 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
SPTBN4Q9H254 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.49■■■□□ 2.47
SPTBN4Q9H254 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SPTBN4Q9H254 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.41■■■□□ 2.46
SPTBN4Q9H254 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.33■■■□□ 2.45
SPTBN4Q9H254 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.33■■■□□ 2.45
SPTBN4Q9H254 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.33■■■□□ 2.45
SPTBN4Q9H254 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SPTBN4Q9H254 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SPTBN4Q9H254 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.2■■■□□ 2.43
SPTBN4Q9H254 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.42
SPTBN4Q9H254 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SPTBN4Q9H254 RPS2P35-201ENST00000443417 897 ntBASIC30.18■■■□□ 2.42
SPTBN4Q9H254 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.13■■■□□ 2.41
SPTBN4Q9H254 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SPTBN4Q9H254 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.08■■■□□ 2.41
SPTBN4Q9H254 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SPTBN4Q9H254 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.05■■■□□ 2.4
SPTBN4Q9H254 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.02■■■□□ 2.4
SPTBN4Q9H254 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.01■■■□□ 2.39
SPTBN4Q9H254 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
SPTBN4Q9H254 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SPTBN4Q9H254 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.97■■■□□ 2.39
SPTBN4Q9H254 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
SPTBN4Q9H254 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SPTBN4Q9H254 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SPTBN4Q9H254 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
SPTBN4Q9H254 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.84■■■□□ 2.37
SPTBN4Q9H254 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.83■■■□□ 2.37
SPTBN4Q9H254 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SPTBN4Q9H254 RARRES2P7-201ENST00000567349 469 ntBASIC29.8■■■□□ 2.36
SPTBN4Q9H254 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SPTBN4Q9H254 DYNLL1-208ENST00000550178 581 ntBASIC29.79■■■□□ 2.36
SPTBN4Q9H254 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.78■■■□□ 2.36
SPTBN4Q9H254 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
SPTBN4Q9H254 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SPTBN4Q9H254 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SPTBN4Q9H254 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SPTBN4Q9H254 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
SPTBN4Q9H254 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.69■■■□□ 2.34
SPTBN4Q9H254 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SPTBN4Q9H254 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.53■■■□□ 2.32
SPTBN4Q9H254 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.53■■■□□ 2.32
SPTBN4Q9H254 SUZ12P1-203ENST00000578195 985 ntBASIC29.52■■■□□ 2.32
SPTBN4Q9H254 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.5■■■□□ 2.31
SPTBN4Q9H254 AC136428.2-201ENST00000563187 214 ntBASIC29.49■■■□□ 2.31
SPTBN4Q9H254 AC097358.2-201ENST00000607541 1159 ntBASIC29.47■■■□□ 2.31
SPTBN4Q9H254 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SPTBN4Q9H254 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms