Protein–RNA interactions for Protein: Q99435

NELL2, Protein kinase C-binding protein NELL2, humanhuman

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL2Q99435 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.37■■■■□ 3.25
NELL2Q99435 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.27■■■■□ 3.24
NELL2Q99435 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.77■■■■□ 3.16
NELL2Q99435 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
NELL2Q99435 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
NELL2Q99435 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.92■■■■□ 3.02
NELL2Q99435 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.75■■■□□ 2.99
NELL2Q99435 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
NELL2Q99435 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.6■■■□□ 2.97
NELL2Q99435 AL356512.1-201ENST00000607453 1739 ntBASIC33.59■■■□□ 2.97
NELL2Q99435 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.5■■■□□ 2.95
NELL2Q99435 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
NELL2Q99435 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.3■■■□□ 2.92
NELL2Q99435 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.29■■■□□ 2.92
NELL2Q99435 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
NELL2Q99435 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
NELL2Q99435 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33■■■□□ 2.87
NELL2Q99435 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
NELL2Q99435 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.82■■■□□ 2.84
NELL2Q99435 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.71■■■□□ 2.83
NELL2Q99435 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
NELL2Q99435 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
NELL2Q99435 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.6■■■□□ 2.81
NELL2Q99435 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
NELL2Q99435 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NELL2Q99435 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
NELL2Q99435 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.33■■■□□ 2.77
NELL2Q99435 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.77
NELL2Q99435 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.32■■■□□ 2.76
NELL2Q99435 AC006077.2-201ENST00000623591 457 ntBASIC32.2■■■□□ 2.75
NELL2Q99435 ZNRF2P1-201ENST00000441407 443 ntBASIC32.17■■■□□ 2.74
NELL2Q99435 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
NELL2Q99435 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.01■■■□□ 2.71
NELL2Q99435 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32■■■□□ 2.71
NELL2Q99435 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.93■■■□□ 2.7
NELL2Q99435 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.93■■■□□ 2.7
NELL2Q99435 AC015813.7-201ENST00000623294 581 ntBASIC31.89■■■□□ 2.7
NELL2Q99435 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NELL2Q99435 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
NELL2Q99435 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NELL2Q99435 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.42■■■□□ 2.62
NELL2Q99435 AP002365.1-201ENST00000603448 772 ntBASIC31.32■■■□□ 2.6
NELL2Q99435 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
NELL2Q99435 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
NELL2Q99435 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NELL2Q99435 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NELL2Q99435 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NELL2Q99435 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.11■■■□□ 2.57
NELL2Q99435 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
NELL2Q99435 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
NELL2Q99435 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.07■■■□□ 2.56
NELL2Q99435 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
NELL2Q99435 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
NELL2Q99435 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
NELL2Q99435 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.02■■■□□ 2.56
NELL2Q99435 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.98■■■□□ 2.55
NELL2Q99435 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NELL2Q99435 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.9■■■□□ 2.54
NELL2Q99435 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.88■■■□□ 2.53
NELL2Q99435 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.87■■■□□ 2.53
NELL2Q99435 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
NELL2Q99435 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
NELL2Q99435 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.81■■■□□ 2.52
NELL2Q99435 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.77■■■□□ 2.52
NELL2Q99435 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
NELL2Q99435 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NELL2Q99435 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
NELL2Q99435 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NELL2Q99435 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.66■■■□□ 2.5
NELL2Q99435 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NELL2Q99435 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.61■■■□□ 2.49
NELL2Q99435 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
NELL2Q99435 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
NELL2Q99435 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NELL2Q99435 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.51■■■□□ 2.47
NELL2Q99435 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.5■■■□□ 2.47
NELL2Q99435 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NELL2Q99435 DYNLL1-208ENST00000550178 581 ntBASIC30.49■■■□□ 2.47
NELL2Q99435 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.48■■■□□ 2.47
NELL2Q99435 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NELL2Q99435 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NELL2Q99435 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
NELL2Q99435 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
NELL2Q99435 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NELL2Q99435 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NELL2Q99435 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NELL2Q99435 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
NELL2Q99435 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.35■■■□□ 2.45
NELL2Q99435 AL031258.1-201ENST00000623562 325 ntBASIC30.28■■■□□ 2.44
NELL2Q99435 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
NELL2Q99435 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NELL2Q99435 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NELL2Q99435 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.19■■■□□ 2.42
NELL2Q99435 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
NELL2Q99435 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.15■■■□□ 2.42
NELL2Q99435 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.15■■■□□ 2.42
NELL2Q99435 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.13■■■□□ 2.41
NELL2Q99435 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.13■■■□□ 2.41
NELL2Q99435 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
NELL2Q99435 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms