RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 NISCHQ9Y2I1 1504 aa72.21■■■■■ 9.15
NECTIN3-201ENST00000319792 CCDC180Q9P1Z9 1646 aa63.32■■■■■ 7.73
NECTIN3-201ENST00000319792 ZCCHC6Q5VYS8 1495 aaKnown RBP60.61■■■■■ 7.29
NECTIN3-201ENST00000319792 ABCC9O60706 1549 aa59.93■■■■■ 7.18
NECTIN3-201ENST00000319792 DCAF1Q9Y4B6 1507 aa59.83■■■■■ 7.17
NECTIN3-201ENST00000319792 DCAF8L2P0C7V8 631 aa59.36■■■■■ 7.09
NECTIN3-201ENST00000319792 MYO15BQ96JP2 1530 aa59.31■■■■■ 7.09
NECTIN3-201ENST00000319792 NACADO15069 1562 aa58.98■■■■■ 7.03
NECTIN3-201ENST00000319792 RB1CC1Q8TDY2 1594 aa58.55■■■■■ 6.96
NECTIN3-201ENST00000319792 SHROOM4Q9ULL8 1493 aa58.29■■■■■ 6.92
NECTIN3-201ENST00000319792 SCRIBQ14160 1630 aa57.95■■■■■ 6.87
NECTIN3-201ENST00000319792 UNC13AQ9UPW8 1703 aa57.42■■■■■ 6.78
NECTIN3-201ENST00000319792 BICRAQ9NZM4 1560 aa56.79■■■■■ 6.68
NECTIN3-201ENST00000319792 PABPN1Q86U42 306 aaKnown RBP eCLIP56.31■■■■■ 6.6
NECTIN3-201ENST00000319792 CECR2Q9BXF3 1484 aa56.04■■■■■ 6.56
NECTIN3-201ENST00000319792 SUPT5HO00267 1087 aaKnown RBP55.86■■■■■ 6.53
NECTIN3-201ENST00000319792 BAZ1AQ9NRL2 1556 aaPredicted RBP55.81■■■■■ 6.52
NECTIN3-201ENST00000319792 RSF1Q96T23 1441 aaPredicted RBP55.78■■■■■ 6.52
NECTIN3-201ENST00000319792 MROH2BQ7Z745 1585 aa55.71■■■■■ 6.51
NECTIN3-201ENST00000319792 SMARCA4P51532 1647 aa55.62■■■■■ 6.49
NECTIN3-201ENST00000319792 WIZO95785 1651 aa55.25■■■■■ 6.44
NECTIN3-201ENST00000319792 EIF4G1Q04637 1599 aaKnown RBP55.07■■■■■ 6.41
NECTIN3-201ENST00000319792 PEG3Q9GZU2 1588 aa55.05■■■■■ 6.4
NECTIN3-201ENST00000319792 SMARCA2P51531 1590 aa54.77■■■■■ 6.36
NECTIN3-201ENST00000319792 ATAD2BQ9ULI0 1458 aa54.75■■■■■ 6.36
NECTIN3-201ENST00000319792 TOP2AP11388 1531 aaKnown RBP54.74■■■■■ 6.35
NECTIN3-201ENST00000319792 BAZ1BQ9UIG0 1483 aaKnown RBP54.4■■■■■ 6.3
NECTIN3-201ENST00000319792 NCAPD3P42695 1498 aa54.39■■■■■ 6.3
NECTIN3-201ENST00000319792 HMGXB3Q12766 1538 aa54.35■■■■■ 6.29
NECTIN3-201ENST00000319792 CC2D2AQ9P2K1 1620 aa54.35■■■■■ 6.29
NECTIN3-201ENST00000319792 CCDC88BA6NC98 1476 aa54.07■■■■■ 6.25
NECTIN3-201ENST00000319792 CHIC1Q5VXU3 224 aa53.39■■■■■ 6.14
NECTIN3-201ENST00000319792 DNAJC5BQ9UF47 199 aa53.13■■■■■ 6.1
NECTIN3-201ENST00000319792 CFTRP13569 1480 aa53.05■■■■■ 6.08
NECTIN3-201ENST00000319792 PRDM2Q13029 1718 aa52.95■■■■■ 6.07
NECTIN3-201ENST00000319792 CADPSQ9ULU8 1353 aa52.9■■■■■ 6.06
NECTIN3-201ENST00000319792 ABCC8Q09428 1581 aa52.76■■■■■ 6.04
NECTIN3-201ENST00000319792 LAMC3Q9Y6N6 1575 aa52.65■■■■■ 6.02
NECTIN3-201ENST00000319792 TRIM41Q8WV44 630 aa52.64■■■■■ 6.02
NECTIN3-201ENST00000319792 WRNQ14191 1432 aaPredicted RBP eCLIP52.51■■■■■ 6
NECTIN3-201ENST00000319792 NESP48681 1621 aa52.51■■■■■ 6
NECTIN3-201ENST00000319792 SYNJ1O43426 1573 aa52.37■■■■■ 5.97
NECTIN3-201ENST00000319792 FANCD2Q9BXW9 1451 aa52.32■■■■■ 5.97
NECTIN3-201ENST00000319792 BIVM-ERCC5R4GMW8 1640 aa52.25■■■■■ 5.95
NECTIN3-201ENST00000319792 TOP2BQ02880 1626 aa52.24■■■■■ 5.95
NECTIN3-201ENST00000319792 PDS5BQ9NTI5 1447 aa52.15■■■■■ 5.94
NECTIN3-201ENST00000319792 CUX1P39880 1505 aa52.15■■■■■ 5.94
NECTIN3-201ENST00000319792 CEP164Q9UPV0 1460 aa52.05■■■■■ 5.92
NECTIN3-201ENST00000319792 KIF21AQ7Z4S6 1674 aa52.01■■■■■ 5.92
NECTIN3-201ENST00000319792 DNMBPQ6XZF7 1577 aa51.86■■■■■ 5.89
NECTIN3-201ENST00000319792 TOPBP1Q92547 1522 aa51.74■■■■■ 5.87
NECTIN3-201ENST00000319792 URB2Q14146 1524 aaKnown RBP51.71■■■■■ 5.87
NECTIN3-201ENST00000319792 SOGA1O94964 1423 aa51.65■■■■■ 5.86
NECTIN3-201ENST00000319792 EEA1Q15075 1411 aa51.64■■■■■ 5.86
NECTIN3-201ENST00000319792 FGD5Q6ZNL6 1462 aa51.62■■■■■ 5.85
NECTIN3-201ENST00000319792 MRC2Q9UBG0 1479 aa51.55■■■■■ 5.84
NECTIN3-201ENST00000319792 FAM9AQ8IZU1 332 aaPredicted RBP51.53■■■■■ 5.84
NECTIN3-201ENST00000319792 RUSC2Q8N2Y8 1516 aa51.49■■■■■ 5.83
NECTIN3-201ENST00000319792 POLA1P09884 1462 aaPredicted RBP51.44■■■■■ 5.83
NECTIN3-201ENST00000319792 ERCC6Q03468 1493 aa51.44■■■■■ 5.83
NECTIN3-201ENST00000319792 WDR62O43379 1518 aa51.35■■■■■ 5.81
NECTIN3-201ENST00000319792 THOC2Q8NI27 1593 aaKnown RBP51.3■■■■■ 5.8
NECTIN3-201ENST00000319792 KIF27Q86VH2 1401 aa51.23■■■■■ 5.79
NECTIN3-201ENST00000319792 CSRNP3Q8WYN3 585 aa51.23■■■■■ 5.79
NECTIN3-201ENST00000319792 ABCA10Q8WWZ4 1543 aa51.22■■■■■ 5.79
NECTIN3-201ENST00000319792 LOC105371045A0A1W2PR82 267 aa51.2■■■■■ 5.79
NECTIN3-201ENST00000319792 RAD54L2Q9Y4B4 1467 aa51.19■■■■■ 5.79
NECTIN3-201ENST00000319792 WDR97A6NE52 1622 aa51.19■■■■■ 5.78
NECTIN3-201ENST00000319792 CUX2O14529 1486 aa51.16■■■■■ 5.78
NECTIN3-201ENST00000319792 TARBP1Q13395 1621 aaKnown RBP51.06■■■■■ 5.76
NECTIN3-201ENST00000319792 KIF21BO75037 1637 aa51.03■■■■■ 5.76
NECTIN3-201ENST00000319792 ABCA5Q8WWZ7 1642 aa50.89■■■■■ 5.74
NECTIN3-201ENST00000319792 IFT140Q96RY7 1462 aa50.86■■■■■ 5.73
NECTIN3-201ENST00000319792 GOLGA3Q08378 1498 aa50.84■■■■■ 5.73
NECTIN3-201ENST00000319792 PRXQ9BXM0 1461 aa50.83■■■■■ 5.73
NECTIN3-201ENST00000319792 IGF1RP08069 1367 aa50.79■■■■■ 5.72
NECTIN3-201ENST00000319792 ERICH3Q5RHP9 1530 aa50.76■■■■■ 5.72
NECTIN3-201ENST00000319792 EHMT2Q96KQ7 1210 aa50.7■■■■■ 5.71
NECTIN3-201ENST00000319792 TDRD9Q8NDG6 1382 aaKnown RBP50.68■■■■■ 5.7
NECTIN3-201ENST00000319792 GAPVD1Q14C86 1478 aa50.68■■■■■ 5.7
NECTIN3-201ENST00000319792 RAPGEF2Q9Y4G8 1499 aa50.66■■■■■ 5.7
NECTIN3-201ENST00000319792 CUL7Q14999 1698 aa50.6■■■■■ 5.69
NECTIN3-201ENST00000319792 TNIKQ9UKE5 1360 aa50.59■■■■■ 5.69
NECTIN3-201ENST00000319792 PBRM1Q86U86 1689 aa50.54■■■■■ 5.68
NECTIN3-201ENST00000319792 CARMIL1Q5VZK9 1371 aa50.52■■■■■ 5.68
NECTIN3-201ENST00000319792 ZNF608Q9ULD9 1512 aaPredicted RBP50.5■■■■■ 5.68
NECTIN3-201ENST00000319792 AQRO60306 1485 aaKnown RBP eCLIP50.46■■■■■ 5.67
NECTIN3-201ENST00000319792 EIF4G3O43432 1585 aaKnown RBP50.44■■■■■ 5.66
NECTIN3-201ENST00000319792 UBTFP17480 764 aaKnown RBP50.43■■■■■ 5.66
NECTIN3-201ENST00000319792 GRIN2BQ13224 1484 aa50.38■■■■■ 5.66
NECTIN3-201ENST00000319792 CEP162Q5TB80 1403 aa50.25■■■■■ 5.64
NECTIN3-201ENST00000319792 ADAMTS12P58397 1594 aa50.23■■■■■ 5.63
NECTIN3-201ENST00000319792 FHAD1B1AJZ9 1412 aa50.15■■■■■ 5.62
NECTIN3-201ENST00000319792 SNAPC4Q5SXM2 1469 aa50.05■■■■■ 5.6
NECTIN3-201ENST00000319792 MAGI1Q96QZ7 1491 aaPredicted RBP50.04■■■■■ 5.6
NECTIN3-201ENST00000319792 CTTNBP2Q8WZ74 1663 aa49.98■■■■■ 5.59
NECTIN3-201ENST00000319792 CLIP1P30622 1438 aa49.96■■■■■ 5.59
NECTIN3-201ENST00000319792 SYNJ2O15056 1496 aa49.82■■■■■ 5.57
NECTIN3-201ENST00000319792 GRIN2AQ12879 1464 aa49.76■■■■■ 5.56
NECTIN3-201ENST00000319792 ARHGAP35Q9NRY4 1499 aa49.63■■■■■ 5.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms