Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.29■■■■□ 3.4
NECTIN4Q96NY8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.2■■■■□ 3.39
NECTIN4Q96NY8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.69■■■■□ 3.3
NECTIN4Q96NY8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
NECTIN4Q96NY8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
NECTIN4Q96NY8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
NECTIN4Q96NY8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.62■■■■□ 3.13
NECTIN4Q96NY8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
NECTIN4Q96NY8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.51■■■■□ 3.12
NECTIN4Q96NY8 AL356512.1-201ENST00000607453 1739 ntBASIC34.47■■■■□ 3.11
NECTIN4Q96NY8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.41■■■■□ 3.1
NECTIN4Q96NY8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
NECTIN4Q96NY8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.21■■■■□ 3.07
NECTIN4Q96NY8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.19■■■■□ 3.06
NECTIN4Q96NY8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
NECTIN4Q96NY8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
NECTIN4Q96NY8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.86■■■■□ 3.01
NECTIN4Q96NY8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.75■■■□□ 2.99
NECTIN4Q96NY8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.7■■■□□ 2.98
NECTIN4Q96NY8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.54■■■□□ 2.96
NECTIN4Q96NY8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
NECTIN4Q96NY8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
NECTIN4Q96NY8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.46■■■□□ 2.95
NECTIN4Q96NY8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
NECTIN4Q96NY8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
NECTIN4Q96NY8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.25■■■□□ 2.91
NECTIN4Q96NY8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.19■■■□□ 2.9
NECTIN4Q96NY8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.17■■■□□ 2.9
NECTIN4Q96NY8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.16■■■□□ 2.9
NECTIN4Q96NY8 AC006077.2-201ENST00000623591 457 ntBASIC33.02■■■□□ 2.88
NECTIN4Q96NY8 ZNRF2P1-201ENST00000441407 443 ntBASIC33.01■■■□□ 2.87
NECTIN4Q96NY8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
NECTIN4Q96NY8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.9■■■□□ 2.86
NECTIN4Q96NY8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.84■■■□□ 2.85
NECTIN4Q96NY8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.78■■■□□ 2.84
NECTIN4Q96NY8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.76■■■□□ 2.83
NECTIN4Q96NY8 AC015813.7-201ENST00000623294 581 ntBASIC32.69■■■□□ 2.82
NECTIN4Q96NY8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
NECTIN4Q96NY8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
NECTIN4Q96NY8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
NECTIN4Q96NY8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.25■■■□□ 2.75
NECTIN4Q96NY8 AP002365.1-201ENST00000603448 772 ntBASIC32.16■■■□□ 2.74
NECTIN4Q96NY8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
NECTIN4Q96NY8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
NECTIN4Q96NY8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
NECTIN4Q96NY8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
NECTIN4Q96NY8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
NECTIN4Q96NY8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.95■■■□□ 2.7
NECTIN4Q96NY8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NECTIN4Q96NY8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
NECTIN4Q96NY8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.89■■■□□ 2.7
NECTIN4Q96NY8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
NECTIN4Q96NY8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.88■■■□□ 2.69
NECTIN4Q96NY8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.86■■■□□ 2.69
NECTIN4Q96NY8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.8■■■□□ 2.68
NECTIN4Q96NY8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
NECTIN4Q96NY8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
NECTIN4Q96NY8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.71■■■□□ 2.67
NECTIN4Q96NY8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.71■■■□□ 2.67
NECTIN4Q96NY8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.71■■■□□ 2.67
NECTIN4Q96NY8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
NECTIN4Q96NY8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
NECTIN4Q96NY8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.65■■■□□ 2.66
NECTIN4Q96NY8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
NECTIN4Q96NY8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.54■■■□□ 2.64
NECTIN4Q96NY8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NECTIN4Q96NY8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.63
NECTIN4Q96NY8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.49■■■□□ 2.63
NECTIN4Q96NY8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NECTIN4Q96NY8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NECTIN4Q96NY8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.42■■■□□ 2.62
NECTIN4Q96NY8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
NECTIN4Q96NY8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
NECTIN4Q96NY8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NECTIN4Q96NY8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.31■■■□□ 2.6
NECTIN4Q96NY8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NECTIN4Q96NY8 DYNLL1-208ENST00000550178 581 ntBASIC31.3■■■□□ 2.6
NECTIN4Q96NY8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NECTIN4Q96NY8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.29■■■□□ 2.6
NECTIN4Q96NY8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.28■■■□□ 2.6
NECTIN4Q96NY8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NECTIN4Q96NY8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
NECTIN4Q96NY8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
NECTIN4Q96NY8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NECTIN4Q96NY8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
NECTIN4Q96NY8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NECTIN4Q96NY8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NECTIN4Q96NY8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.16■■■□□ 2.58
NECTIN4Q96NY8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NECTIN4Q96NY8 AL031258.1-201ENST00000623562 325 ntBASIC31.06■■■□□ 2.56
NECTIN4Q96NY8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NECTIN4Q96NY8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.02■■■□□ 2.56
NECTIN4Q96NY8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
NECTIN4Q96NY8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.98■■■□□ 2.55
NECTIN4Q96NY8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NECTIN4Q96NY8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.96■■■□□ 2.55
NECTIN4Q96NY8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.96■■■□□ 2.55
NECTIN4Q96NY8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.95■■■□□ 2.55
NECTIN4Q96NY8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
NECTIN4Q96NY8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms