Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC41.35■■■■■ 4.21
CDCA5Q96FF9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC41.23■■■■■ 4.19
CDCA5Q96FF9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC40.7■■■■■ 4.11
CDCA5Q96FF9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
CDCA5Q96FF9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
CDCA5Q96FF9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC39.63■■■■□ 3.94
CDCA5Q96FF9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC39.47■■■■□ 3.91
CDCA5Q96FF9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC39.33■■■■□ 3.89
CDCA5Q96FF9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC39.32■■■■□ 3.89
CDCA5Q96FF9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
CDCA5Q96FF9 AL356512.1-201ENST00000607453 1739 ntBASIC39.23■■■■□ 3.87
CDCA5Q96FF9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC39.2■■■■□ 3.87
CDCA5Q96FF9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC39.05■■■■□ 3.84
CDCA5Q96FF9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC39.02■■■■□ 3.84
CDCA5Q96FF9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
CDCA5Q96FF9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
CDCA5Q96FF9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC38.51■■■■□ 3.76
CDCA5Q96FF9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC38.5■■■■□ 3.75
CDCA5Q96FF9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC38.35■■■■□ 3.73
CDCA5Q96FF9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
CDCA5Q96FF9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
CDCA5Q96FF9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC38.16■■■■□ 3.7
CDCA5Q96FF9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC38.13■■■■□ 3.69
CDCA5Q96FF9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC38.11■■■■□ 3.69
CDCA5Q96FF9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
CDCA5Q96FF9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
CDCA5Q96FF9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC37.93■■■■□ 3.66
CDCA5Q96FF9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC37.87■■■■□ 3.65
CDCA5Q96FF9 ZNRF2P1-201ENST00000441407 443 ntBASIC37.66■■■■□ 3.62
CDCA5Q96FF9 AC006077.2-201ENST00000623591 457 ntBASIC37.62■■■■□ 3.61
CDCA5Q96FF9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC37.6■■■■□ 3.61
CDCA5Q96FF9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC37.56■■■■□ 3.6
CDCA5Q96FF9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
CDCA5Q96FF9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC37.39■■■■□ 3.58
CDCA5Q96FF9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC37.35■■■■□ 3.57
CDCA5Q96FF9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC37.32■■■■□ 3.56
CDCA5Q96FF9 AC015813.7-201ENST00000623294 581 ntBASIC37.29■■■■□ 3.56
CDCA5Q96FF9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC37.21■■■■□ 3.55
CDCA5Q96FF9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
CDCA5Q96FF9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
CDCA5Q96FF9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC36.79■■■■□ 3.48
CDCA5Q96FF9 AP002365.1-201ENST00000603448 772 ntBASIC36.73■■■■□ 3.47
CDCA5Q96FF9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC36.72■■■■□ 3.47
CDCA5Q96FF9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC36.56■■■■□ 3.44
CDCA5Q96FF9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC36.52■■■■□ 3.44
CDCA5Q96FF9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC36.46■■■■□ 3.43
CDCA5Q96FF9 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
CDCA5Q96FF9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC36.45■■■■□ 3.43
CDCA5Q96FF9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC36.45■■■■□ 3.43
CDCA5Q96FF9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
CDCA5Q96FF9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
CDCA5Q96FF9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC36.43■■■■□ 3.42
CDCA5Q96FF9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
CDCA5Q96FF9 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
CDCA5Q96FF9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC36.32■■■■□ 3.4
CDCA5Q96FF9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC36.31■■■■□ 3.4
CDCA5Q96FF9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC36.3■■■■□ 3.4
CDCA5Q96FF9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
CDCA5Q96FF9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC36.23■■■■□ 3.39
CDCA5Q96FF9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC36.18■■■■□ 3.38
CDCA5Q96FF9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
CDCA5Q96FF9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC36.08■■■■□ 3.37
CDCA5Q96FF9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC36.03■■■■□ 3.36
CDCA5Q96FF9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC35.96■■■■□ 3.35
CDCA5Q96FF9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC35.95■■■■□ 3.35
CDCA5Q96FF9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC35.95■■■■□ 3.35
CDCA5Q96FF9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CDCA5Q96FF9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC35.86■■■■□ 3.33
CDCA5Q96FF9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC35.86■■■■□ 3.33
CDCA5Q96FF9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
CDCA5Q96FF9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC35.83■■■■□ 3.33
CDCA5Q96FF9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC35.8■■■■□ 3.32
CDCA5Q96FF9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
CDCA5Q96FF9 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
CDCA5Q96FF9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
CDCA5Q96FF9 DYNLL1-208ENST00000550178 581 ntBASIC35.77■■■■□ 3.32
CDCA5Q96FF9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC35.74■■■■□ 3.31
CDCA5Q96FF9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CDCA5Q96FF9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
CDCA5Q96FF9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CDCA5Q96FF9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC35.65■■■■□ 3.3
CDCA5Q96FF9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC35.63■■■■□ 3.29
CDCA5Q96FF9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CDCA5Q96FF9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
CDCA5Q96FF9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC35.58■■■■□ 3.29
CDCA5Q96FF9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC35.56■■■■□ 3.28
CDCA5Q96FF9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.54■■■■□ 3.28
CDCA5Q96FF9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC35.52■■■■□ 3.28
CDCA5Q96FF9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CDCA5Q96FF9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
CDCA5Q96FF9 AL031258.1-201ENST00000623562 325 ntBASIC35.49■■■■□ 3.27
CDCA5Q96FF9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC35.43■■■■□ 3.26
CDCA5Q96FF9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC35.37■■■■□ 3.25
CDCA5Q96FF9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC35.37■■■■□ 3.25
CDCA5Q96FF9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CDCA5Q96FF9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC35.35■■■■□ 3.25
CDCA5Q96FF9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC35.35■■■■□ 3.25
CDCA5Q96FF9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CDCA5Q96FF9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
CDCA5Q96FF9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms