Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.45■■■■□ 3.43
SMRP1Q8NCR6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.44■■■■□ 3.42
SMRP1Q8NCR6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.96■■■■□ 3.35
SMRP1Q8NCR6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
SMRP1Q8NCR6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
SMRP1Q8NCR6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
SMRP1Q8NCR6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
SMRP1Q8NCR6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.72■■■■□ 3.15
SMRP1Q8NCR6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.72■■■■□ 3.15
SMRP1Q8NCR6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
SMRP1Q8NCR6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
SMRP1Q8NCR6 AL356512.1-201ENST00000607453 1739 ntBASIC34.56■■■■□ 3.12
SMRP1Q8NCR6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.44■■■■□ 3.1
SMRP1Q8NCR6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.41■■■■□ 3.1
SMRP1Q8NCR6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SMRP1Q8NCR6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
SMRP1Q8NCR6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.96■■■■□ 3.03
SMRP1Q8NCR6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.94■■■■□ 3.02
SMRP1Q8NCR6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.79■■■■□ 3
SMRP1Q8NCR6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
SMRP1Q8NCR6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
SMRP1Q8NCR6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.68■■■□□ 2.98
SMRP1Q8NCR6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.67■■■□□ 2.98
SMRP1Q8NCR6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.66■■■□□ 2.98
SMRP1Q8NCR6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
SMRP1Q8NCR6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
SMRP1Q8NCR6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.43■■■□□ 2.94
SMRP1Q8NCR6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
SMRP1Q8NCR6 ZNRF2P1-201ENST00000441407 443 ntBASIC33.29■■■□□ 2.92
SMRP1Q8NCR6 AC006077.2-201ENST00000623591 457 ntBASIC33.26■■■□□ 2.91
SMRP1Q8NCR6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.16■■■□□ 2.9
SMRP1Q8NCR6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.13■■■□□ 2.89
SMRP1Q8NCR6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SMRP1Q8NCR6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
SMRP1Q8NCR6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.95■■■□□ 2.87
SMRP1Q8NCR6 AC015813.7-201ENST00000623294 581 ntBASIC32.89■■■□□ 2.86
SMRP1Q8NCR6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.87■■■□□ 2.85
SMRP1Q8NCR6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
SMRP1Q8NCR6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.77■■■□□ 2.84
SMRP1Q8NCR6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMRP1Q8NCR6 AP002365.1-201ENST00000603448 772 ntBASIC32.44■■■□□ 2.78
SMRP1Q8NCR6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.4■■■□□ 2.78
SMRP1Q8NCR6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SMRP1Q8NCR6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
SMRP1Q8NCR6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
SMRP1Q8NCR6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SMRP1Q8NCR6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.19■■■□□ 2.74
SMRP1Q8NCR6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.18■■■□□ 2.74
SMRP1Q8NCR6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.16■■■□□ 2.74
SMRP1Q8NCR6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
SMRP1Q8NCR6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.13■■■□□ 2.73
SMRP1Q8NCR6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SMRP1Q8NCR6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
SMRP1Q8NCR6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.05■■■□□ 2.72
SMRP1Q8NCR6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SMRP1Q8NCR6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.03■■■□□ 2.72
SMRP1Q8NCR6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32■■■□□ 2.71
SMRP1Q8NCR6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.99■■■□□ 2.71
SMRP1Q8NCR6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SMRP1Q8NCR6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.94■■■□□ 2.7
SMRP1Q8NCR6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SMRP1Q8NCR6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.82■■■□□ 2.68
SMRP1Q8NCR6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
SMRP1Q8NCR6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
SMRP1Q8NCR6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.72■■■□□ 2.67
SMRP1Q8NCR6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMRP1Q8NCR6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMRP1Q8NCR6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.63■■■□□ 2.65
SMRP1Q8NCR6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMRP1Q8NCR6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMRP1Q8NCR6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
SMRP1Q8NCR6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMRP1Q8NCR6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMRP1Q8NCR6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SMRP1Q8NCR6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMRP1Q8NCR6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMRP1Q8NCR6 DYNLL1-208ENST00000550178 581 ntBASIC31.55■■■□□ 2.64
SMRP1Q8NCR6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SMRP1Q8NCR6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMRP1Q8NCR6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.45■■■□□ 2.63
SMRP1Q8NCR6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMRP1Q8NCR6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.44■■■□□ 2.62
SMRP1Q8NCR6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.44■■■□□ 2.62
SMRP1Q8NCR6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMRP1Q8NCR6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMRP1Q8NCR6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
SMRP1Q8NCR6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.36■■■□□ 2.61
SMRP1Q8NCR6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SMRP1Q8NCR6 AL031258.1-201ENST00000623562 325 ntBASIC31.31■■■□□ 2.6
SMRP1Q8NCR6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMRP1Q8NCR6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
SMRP1Q8NCR6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.24■■■□□ 2.59
SMRP1Q8NCR6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMRP1Q8NCR6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.22■■■□□ 2.59
SMRP1Q8NCR6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.21■■■□□ 2.59
SMRP1Q8NCR6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.21■■■□□ 2.59
SMRP1Q8NCR6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.21■■■□□ 2.59
SMRP1Q8NCR6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SMRP1Q8NCR6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMRP1Q8NCR6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms