Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.45■■■■□ 3.43
SMRP1Q8NCR6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.44■■■■□ 3.42
SMRP1Q8NCR6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.96■■■■□ 3.35
SMRP1Q8NCR6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
SMRP1Q8NCR6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
SMRP1Q8NCR6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
SMRP1Q8NCR6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
SMRP1Q8NCR6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.72■■■■□ 3.15
SMRP1Q8NCR6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.72■■■■□ 3.15
SMRP1Q8NCR6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
SMRP1Q8NCR6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
SMRP1Q8NCR6 AL356512.1-201ENST00000607453 1739 ntBASIC34.56■■■■□ 3.12
SMRP1Q8NCR6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.44■■■■□ 3.1
SMRP1Q8NCR6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.41■■■■□ 3.1
SMRP1Q8NCR6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SMRP1Q8NCR6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
SMRP1Q8NCR6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.96■■■■□ 3.03
SMRP1Q8NCR6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.94■■■■□ 3.02
SMRP1Q8NCR6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.79■■■■□ 3
SMRP1Q8NCR6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
SMRP1Q8NCR6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
SMRP1Q8NCR6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.68■■■□□ 2.98
SMRP1Q8NCR6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.67■■■□□ 2.98
SMRP1Q8NCR6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.66■■■□□ 2.98
SMRP1Q8NCR6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
SMRP1Q8NCR6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
SMRP1Q8NCR6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.43■■■□□ 2.94
SMRP1Q8NCR6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
SMRP1Q8NCR6 ZNRF2P1-201ENST00000441407 443 ntBASIC33.29■■■□□ 2.92
SMRP1Q8NCR6 AC006077.2-201ENST00000623591 457 ntBASIC33.26■■■□□ 2.91
SMRP1Q8NCR6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.16■■■□□ 2.9
SMRP1Q8NCR6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.13■■■□□ 2.89
SMRP1Q8NCR6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SMRP1Q8NCR6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
SMRP1Q8NCR6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.95■■■□□ 2.87
SMRP1Q8NCR6 AC015813.7-201ENST00000623294 581 ntBASIC32.89■■■□□ 2.86
SMRP1Q8NCR6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.87■■■□□ 2.85
SMRP1Q8NCR6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
SMRP1Q8NCR6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.77■■■□□ 2.84
SMRP1Q8NCR6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMRP1Q8NCR6 AP002365.1-201ENST00000603448 772 ntBASIC32.44■■■□□ 2.78
SMRP1Q8NCR6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.4■■■□□ 2.78
SMRP1Q8NCR6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SMRP1Q8NCR6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
SMRP1Q8NCR6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
SMRP1Q8NCR6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SMRP1Q8NCR6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.19■■■□□ 2.74
SMRP1Q8NCR6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.18■■■□□ 2.74
SMRP1Q8NCR6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.16■■■□□ 2.74
SMRP1Q8NCR6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
SMRP1Q8NCR6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.13■■■□□ 2.73
SMRP1Q8NCR6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SMRP1Q8NCR6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
SMRP1Q8NCR6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.05■■■□□ 2.72
SMRP1Q8NCR6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SMRP1Q8NCR6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.03■■■□□ 2.72
SMRP1Q8NCR6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32■■■□□ 2.71
SMRP1Q8NCR6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.99■■■□□ 2.71
SMRP1Q8NCR6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SMRP1Q8NCR6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.94■■■□□ 2.7
SMRP1Q8NCR6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SMRP1Q8NCR6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.82■■■□□ 2.68
SMRP1Q8NCR6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
SMRP1Q8NCR6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
SMRP1Q8NCR6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.72■■■□□ 2.67
SMRP1Q8NCR6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMRP1Q8NCR6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMRP1Q8NCR6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.63■■■□□ 2.65
SMRP1Q8NCR6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMRP1Q8NCR6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMRP1Q8NCR6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
SMRP1Q8NCR6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMRP1Q8NCR6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMRP1Q8NCR6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SMRP1Q8NCR6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMRP1Q8NCR6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMRP1Q8NCR6 DYNLL1-208ENST00000550178 581 ntBASIC31.55■■■□□ 2.64
SMRP1Q8NCR6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SMRP1Q8NCR6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMRP1Q8NCR6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.45■■■□□ 2.63
SMRP1Q8NCR6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMRP1Q8NCR6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.44■■■□□ 2.62
SMRP1Q8NCR6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.44■■■□□ 2.62
SMRP1Q8NCR6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMRP1Q8NCR6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMRP1Q8NCR6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
SMRP1Q8NCR6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.36■■■□□ 2.61
SMRP1Q8NCR6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SMRP1Q8NCR6 AL031258.1-201ENST00000623562 325 ntBASIC31.31■■■□□ 2.6
SMRP1Q8NCR6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMRP1Q8NCR6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
SMRP1Q8NCR6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.24■■■□□ 2.59
SMRP1Q8NCR6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMRP1Q8NCR6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.22■■■□□ 2.59
SMRP1Q8NCR6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.21■■■□□ 2.59
SMRP1Q8NCR6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.21■■■□□ 2.59
SMRP1Q8NCR6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.21■■■□□ 2.59
SMRP1Q8NCR6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SMRP1Q8NCR6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMRP1Q8NCR6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms