Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC44.41■■■■■ 4.7
COL23A1Q86Y22 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC44.41■■■■■ 4.7
COL23A1Q86Y22 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC43.9■■■■■ 4.62
COL23A1Q86Y22 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC43.39■■■■■ 4.54
COL23A1Q86Y22 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC42.89■■■■■ 4.46
COL23A1Q86Y22 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC42.51■■■■■ 4.4
COL23A1Q86Y22 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC42.48■■■■■ 4.39
COL23A1Q86Y22 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC42.46■■■■■ 4.39
COL23A1Q86Y22 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC42.33■■■■■ 4.37
COL23A1Q86Y22 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC42.32■■■■■ 4.37
COL23A1Q86Y22 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC42.01■■■■■ 4.32
COL23A1Q86Y22 AL356512.1-201ENST00000607453 1739 ntBASIC42.01■■■■■ 4.32
COL23A1Q86Y22 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC42.01■■■■■ 4.32
COL23A1Q86Y22 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC42■■■■■ 4.31
COL23A1Q86Y22 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC41.97■■■■■ 4.31
COL23A1Q86Y22 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC41.78■■■■■ 4.28
COL23A1Q86Y22 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC41.37■■■■■ 4.21
COL23A1Q86Y22 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC41.3■■■■■ 4.2
COL23A1Q86Y22 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC41.28■■■■■ 4.2
COL23A1Q86Y22 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
COL23A1Q86Y22 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC41.16■■■■■ 4.18
COL23A1Q86Y22 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC41.15■■■■■ 4.18
COL23A1Q86Y22 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC41.1■■■■■ 4.17
COL23A1Q86Y22 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC41.06■■■■■ 4.16
COL23A1Q86Y22 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC41.04■■■■■ 4.16
COL23A1Q86Y22 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
COL23A1Q86Y22 INO80B-203ENST00000409917 796 ntTSL 2 BASIC40.91■■■■■ 4.14
COL23A1Q86Y22 ZNRF2P1-201ENST00000441407 443 ntBASIC40.67■■■■■ 4.1
COL23A1Q86Y22 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC40.66■■■■■ 4.1
COL23A1Q86Y22 AC006077.2-201ENST00000623591 457 ntBASIC40.61■■■■■ 4.09
COL23A1Q86Y22 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC40.47■■■■■ 4.07
COL23A1Q86Y22 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC40.44■■■■■ 4.06
COL23A1Q86Y22 AC015813.7-201ENST00000623294 581 ntBASIC40.18■■■■■ 4.02
COL23A1Q86Y22 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC40.17■■■■■ 4.02
COL23A1Q86Y22 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
COL23A1Q86Y22 HES6-203ENST00000409160 1600 ntTSL 2 BASIC40.13■■■■■ 4.01
COL23A1Q86Y22 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC40.09■■■■■ 4.01
COL23A1Q86Y22 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC39.91■■■■□ 3.98
COL23A1Q86Y22 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC39.73■■■■□ 3.95
COL23A1Q86Y22 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
COL23A1Q86Y22 AP002365.1-201ENST00000603448 772 ntBASIC39.64■■■■□ 3.94
COL23A1Q86Y22 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC39.55■■■■□ 3.92
COL23A1Q86Y22 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC39.54■■■■□ 3.92
COL23A1Q86Y22 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC39.48■■■■□ 3.91
COL23A1Q86Y22 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC39.38■■■■□ 3.89
COL23A1Q86Y22 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC39.36■■■■□ 3.89
COL23A1Q86Y22 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC39.36■■■■□ 3.89
COL23A1Q86Y22 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
COL23A1Q86Y22 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
COL23A1Q86Y22 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC39.26■■■■□ 3.88
COL23A1Q86Y22 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC39.19■■■■□ 3.86
COL23A1Q86Y22 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC39.18■■■■□ 3.86
COL23A1Q86Y22 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC39.15■■■■□ 3.86
COL23A1Q86Y22 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC39.15■■■■□ 3.86
COL23A1Q86Y22 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC39.1■■■■□ 3.85
COL23A1Q86Y22 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
COL23A1Q86Y22 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
COL23A1Q86Y22 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC39■■■■□ 3.83
COL23A1Q86Y22 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC38.99■■■■□ 3.83
COL23A1Q86Y22 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC38.99■■■■□ 3.83
COL23A1Q86Y22 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
COL23A1Q86Y22 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC38.89■■■■□ 3.82
COL23A1Q86Y22 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC38.84■■■■□ 3.81
COL23A1Q86Y22 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC38.84■■■■□ 3.81
COL23A1Q86Y22 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC38.73■■■■□ 3.79
COL23A1Q86Y22 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC38.73■■■■□ 3.79
COL23A1Q86Y22 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.78
COL23A1Q86Y22 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
COL23A1Q86Y22 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC38.68■■■■□ 3.78
COL23A1Q86Y22 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
COL23A1Q86Y22 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC38.64■■■■□ 3.78
COL23A1Q86Y22 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
COL23A1Q86Y22 DYNLL1-208ENST00000550178 581 ntBASIC38.55■■■■□ 3.76
COL23A1Q86Y22 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC38.46■■■■□ 3.75
COL23A1Q86Y22 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC38.44■■■■□ 3.74
COL23A1Q86Y22 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
COL23A1Q86Y22 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC38.43■■■■□ 3.74
COL23A1Q86Y22 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC38.39■■■■□ 3.74
COL23A1Q86Y22 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.74
COL23A1Q86Y22 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
COL23A1Q86Y22 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
COL23A1Q86Y22 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
COL23A1Q86Y22 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC38.34■■■■□ 3.73
COL23A1Q86Y22 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC38.33■■■■□ 3.73
COL23A1Q86Y22 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC38.31■■■■□ 3.72
COL23A1Q86Y22 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
COL23A1Q86Y22 AL031258.1-201ENST00000623562 325 ntBASIC38.27■■■■□ 3.72
COL23A1Q86Y22 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC38.26■■■■□ 3.72
COL23A1Q86Y22 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC38.25■■■■□ 3.71
COL23A1Q86Y22 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC38.2■■■■□ 3.71
COL23A1Q86Y22 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC38.18■■■■□ 3.7
COL23A1Q86Y22 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC38.13■■■■□ 3.69
COL23A1Q86Y22 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC38.13■■■■□ 3.69
COL23A1Q86Y22 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC38.12■■■■□ 3.69
COL23A1Q86Y22 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC38.12■■■■□ 3.69
COL23A1Q86Y22 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
COL23A1Q86Y22 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC38.11■■■■□ 3.69
COL23A1Q86Y22 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC38.1■■■■□ 3.69
COL23A1Q86Y22 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
COL23A1Q86Y22 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms