Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC38.56■■■■□ 3.76
TRIM60Q495X7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC38.45■■■■□ 3.75
TRIM60Q495X7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC37.96■■■■□ 3.67
TRIM60Q495X7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
TRIM60Q495X7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
TRIM60Q495X7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.95■■■■□ 3.51
TRIM60Q495X7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC36.82■■■■□ 3.48
TRIM60Q495X7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC36.71■■■■□ 3.47
TRIM60Q495X7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC36.7■■■■□ 3.47
TRIM60Q495X7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
TRIM60Q495X7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
TRIM60Q495X7 AL356512.1-201ENST00000607453 1739 ntBASIC36.58■■■■□ 3.45
TRIM60Q495X7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC36.43■■■■□ 3.42
TRIM60Q495X7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC36.39■■■■□ 3.42
TRIM60Q495X7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
TRIM60Q495X7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
TRIM60Q495X7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.92■■■■□ 3.34
TRIM60Q495X7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.9■■■■□ 3.34
TRIM60Q495X7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.77■■■■□ 3.32
TRIM60Q495X7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
TRIM60Q495X7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
TRIM60Q495X7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC35.61■■■■□ 3.29
TRIM60Q495X7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC35.58■■■■□ 3.29
TRIM60Q495X7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC35.57■■■■□ 3.28
TRIM60Q495X7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
TRIM60Q495X7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
TRIM60Q495X7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC35.39■■■■□ 3.26
TRIM60Q495X7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC35.31■■■■□ 3.24
TRIM60Q495X7 ZNRF2P1-201ENST00000441407 443 ntBASIC35.14■■■■□ 3.22
TRIM60Q495X7 AC006077.2-201ENST00000623591 457 ntBASIC35.08■■■■□ 3.21
TRIM60Q495X7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC35.05■■■■□ 3.2
TRIM60Q495X7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.03■■■■□ 3.2
TRIM60Q495X7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
TRIM60Q495X7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.91■■■■□ 3.18
TRIM60Q495X7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC34.82■■■■□ 3.16
TRIM60Q495X7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.81■■■■□ 3.16
TRIM60Q495X7 AC015813.7-201ENST00000623294 581 ntBASIC34.77■■■■□ 3.16
TRIM60Q495X7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
TRIM60Q495X7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.69■■■■□ 3.14
TRIM60Q495X7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
TRIM60Q495X7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC34.3■■■■□ 3.08
TRIM60Q495X7 AP002365.1-201ENST00000603448 772 ntBASIC34.27■■■■□ 3.08
TRIM60Q495X7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
TRIM60Q495X7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC34.09■■■■□ 3.05
TRIM60Q495X7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC34.08■■■■□ 3.05
TRIM60Q495X7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC34.03■■■■□ 3.04
TRIM60Q495X7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
TRIM60Q495X7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC34.01■■■■□ 3.03
TRIM60Q495X7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC34.01■■■■□ 3.03
TRIM60Q495X7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
TRIM60Q495X7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
TRIM60Q495X7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.99■■■■□ 3.03
TRIM60Q495X7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
TRIM60Q495X7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
TRIM60Q495X7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC33.87■■■■□ 3.01
TRIM60Q495X7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC33.87■■■■□ 3.01
TRIM60Q495X7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC33.87■■■■□ 3.01
TRIM60Q495X7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
TRIM60Q495X7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC33.81■■■■□ 3
TRIM60Q495X7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC33.73■■■□□ 2.99
TRIM60Q495X7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
TRIM60Q495X7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC33.67■■■□□ 2.98
TRIM60Q495X7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC33.63■■■□□ 2.97
TRIM60Q495X7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC33.55■■■□□ 2.96
TRIM60Q495X7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC33.52■■■□□ 2.96
TRIM60Q495X7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
TRIM60Q495X7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.49■■■□□ 2.95
TRIM60Q495X7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC33.47■■■□□ 2.95
TRIM60Q495X7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC33.46■■■□□ 2.95
TRIM60Q495X7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
TRIM60Q495X7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC33.4■■■□□ 2.94
TRIM60Q495X7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.38■■■□□ 2.93
TRIM60Q495X7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
TRIM60Q495X7 DYNLL1-208ENST00000550178 581 ntBASIC33.38■■■□□ 2.93
TRIM60Q495X7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
TRIM60Q495X7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
TRIM60Q495X7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC33.33■■■□□ 2.93
TRIM60Q495X7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
TRIM60Q495X7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
TRIM60Q495X7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
TRIM60Q495X7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC33.25■■■□□ 2.91
TRIM60Q495X7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC33.22■■■□□ 2.91
TRIM60Q495X7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
TRIM60Q495X7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
TRIM60Q495X7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC33.2■■■□□ 2.91
TRIM60Q495X7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC33.19■■■□□ 2.9
TRIM60Q495X7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
TRIM60Q495X7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.12■■■□□ 2.89
TRIM60Q495X7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
TRIM60Q495X7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
TRIM60Q495X7 AL031258.1-201ENST00000623562 325 ntBASIC33.1■■■□□ 2.89
TRIM60Q495X7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
TRIM60Q495X7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC33■■■□□ 2.87
TRIM60Q495X7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33■■■□□ 2.87
TRIM60Q495X7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
TRIM60Q495X7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.99■■■□□ 2.87
TRIM60Q495X7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.98■■■□□ 2.87
TRIM60Q495X7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.96■■■□□ 2.87
TRIM60Q495X7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
TRIM60Q495X7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms