Protein–RNA interactions for Protein: Q04721

NOTCH2, Neurogenic locus notch homolog protein 2, humanhuman

Predictions only

Length 2,471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2Q04721 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.46■■■□□ 2.47
NOTCH2Q04721 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
NOTCH2Q04721 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.45■■■□□ 2.3
NOTCH2Q04721 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NOTCH2Q04721 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
NOTCH2Q04721 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
NOTCH2Q04721 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
NOTCH2Q04721 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.86■■■□□ 2.21
NOTCH2Q04721 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
NOTCH2Q04721 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
NOTCH2Q04721 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
NOTCH2Q04721 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.51■■■□□ 2.15
NOTCH2Q04721 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
NOTCH2Q04721 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
NOTCH2Q04721 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NOTCH2Q04721 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.17■■■□□ 2.1
NOTCH2Q04721 ZNRF2P1-201ENST00000441407 443 ntBASIC28.07■■■□□ 2.08
NOTCH2Q04721 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
NOTCH2Q04721 AC006077.2-201ENST00000623591 457 ntBASIC28.05■■■□□ 2.08
NOTCH2Q04721 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
NOTCH2Q04721 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
NOTCH2Q04721 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.99■■■□□ 2.07
NOTCH2Q04721 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
NOTCH2Q04721 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
NOTCH2Q04721 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
NOTCH2Q04721 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
NOTCH2Q04721 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.77■■■□□ 2.04
NOTCH2Q04721 AL356512.1-201ENST00000607453 1739 ntBASIC27.77■■■□□ 2.04
NOTCH2Q04721 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.69■■■□□ 2.02
NOTCH2Q04721 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.55■■■□□ 2
NOTCH2Q04721 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
NOTCH2Q04721 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
NOTCH2Q04721 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.39■■□□□ 1.97
NOTCH2Q04721 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.28■■□□□ 1.96
NOTCH2Q04721 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NOTCH2Q04721 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.27■■□□□ 1.96
NOTCH2Q04721 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.26■■□□□ 1.95
NOTCH2Q04721 AP002365.1-201ENST00000603448 772 ntBASIC27.25■■□□□ 1.95
NOTCH2Q04721 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
NOTCH2Q04721 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
NOTCH2Q04721 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.08■■□□□ 1.93
NOTCH2Q04721 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.07■■□□□ 1.92
NOTCH2Q04721 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.06■■□□□ 1.92
NOTCH2Q04721 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
NOTCH2Q04721 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
NOTCH2Q04721 AC015813.7-201ENST00000623294 581 ntBASIC27.02■■□□□ 1.92
NOTCH2Q04721 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
NOTCH2Q04721 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NOTCH2Q04721 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.9■■□□□ 1.9
NOTCH2Q04721 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NOTCH2Q04721 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
NOTCH2Q04721 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.78■■□□□ 1.88
NOTCH2Q04721 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
NOTCH2Q04721 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NOTCH2Q04721 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.68■■□□□ 1.86
NOTCH2Q04721 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.65■■□□□ 1.86
NOTCH2Q04721 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.61■■□□□ 1.85
NOTCH2Q04721 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NOTCH2Q04721 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.59■■□□□ 1.85
NOTCH2Q04721 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
NOTCH2Q04721 RPS2P35-201ENST00000443417 897 ntBASIC26.55■■□□□ 1.84
NOTCH2Q04721 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.54■■□□□ 1.84
NOTCH2Q04721 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.53■■□□□ 1.84
NOTCH2Q04721 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.84
NOTCH2Q04721 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NOTCH2Q04721 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.44■■□□□ 1.82
NOTCH2Q04721 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.42■■□□□ 1.82
NOTCH2Q04721 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
NOTCH2Q04721 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NOTCH2Q04721 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.38■■□□□ 1.81
NOTCH2Q04721 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.37■■□□□ 1.81
NOTCH2Q04721 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NOTCH2Q04721 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NOTCH2Q04721 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
NOTCH2Q04721 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.29■■□□□ 1.8
NOTCH2Q04721 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
NOTCH2Q04721 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NOTCH2Q04721 DYNLL1-208ENST00000550178 581 ntBASIC26.24■■□□□ 1.79
NOTCH2Q04721 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NOTCH2Q04721 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NOTCH2Q04721 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NOTCH2Q04721 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.16■■□□□ 1.78
NOTCH2Q04721 RARRES2P7-201ENST00000567349 469 ntBASIC26.15■■□□□ 1.78
NOTCH2Q04721 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.15■■□□□ 1.78
NOTCH2Q04721 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NOTCH2Q04721 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
NOTCH2Q04721 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.13■■□□□ 1.77
NOTCH2Q04721 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NOTCH2Q04721 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NOTCH2Q04721 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.07■■□□□ 1.76
NOTCH2Q04721 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NOTCH2Q04721 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NOTCH2Q04721 AC097358.2-201ENST00000607541 1159 ntBASIC25.93■■□□□ 1.74
NOTCH2Q04721 SUZ12P1-203ENST00000578195 985 ntBASIC25.88■■□□□ 1.73
NOTCH2Q04721 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NOTCH2Q04721 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.86■■□□□ 1.73
NOTCH2Q04721 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.86■■□□□ 1.73
NOTCH2Q04721 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.86■■□□□ 1.73
NOTCH2Q04721 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NOTCH2Q04721 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms