Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC39.43■■■■□ 3.9
HMGCRP04035 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC39.35■■■■□ 3.89
HMGCRP04035 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC38.82■■■■□ 3.8
HMGCRP04035 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
HMGCRP04035 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
HMGCRP04035 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37.8■■■■□ 3.64
HMGCRP04035 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC37.64■■■■□ 3.62
HMGCRP04035 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC37.52■■■■□ 3.6
HMGCRP04035 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.59
HMGCRP04035 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC37.48■■■■□ 3.59
HMGCRP04035 AL356512.1-201ENST00000607453 1739 ntBASIC37.41■■■■□ 3.58
HMGCRP04035 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
HMGCRP04035 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC37.22■■■■□ 3.55
HMGCRP04035 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC37.19■■■■□ 3.54
HMGCRP04035 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
HMGCRP04035 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
HMGCRP04035 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC36.75■■■■□ 3.47
HMGCRP04035 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC36.7■■■■□ 3.46
HMGCRP04035 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC36.58■■■■□ 3.45
HMGCRP04035 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
HMGCRP04035 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
HMGCRP04035 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC36.4■■■■□ 3.42
HMGCRP04035 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC36.39■■■■□ 3.42
HMGCRP04035 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC36.3■■■■□ 3.4
HMGCRP04035 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
HMGCRP04035 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
HMGCRP04035 INO80B-203ENST00000409917 796 ntTSL 2 BASIC36.11■■■■□ 3.37
HMGCRP04035 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC36.08■■■■□ 3.37
HMGCRP04035 ZNRF2P1-201ENST00000441407 443 ntBASIC35.92■■■■□ 3.34
HMGCRP04035 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.91■■■■□ 3.34
HMGCRP04035 AC006077.2-201ENST00000623591 457 ntBASIC35.9■■■■□ 3.34
HMGCRP04035 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC35.82■■■■□ 3.32
HMGCRP04035 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
HMGCRP04035 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC35.62■■■■□ 3.29
HMGCRP04035 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.62■■■■□ 3.29
HMGCRP04035 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC35.56■■■■□ 3.28
HMGCRP04035 AC015813.7-201ENST00000623294 581 ntBASIC35.53■■■■□ 3.28
HMGCRP04035 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.51■■■■□ 3.28
HMGCRP04035 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
HMGCRP04035 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
HMGCRP04035 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC35.05■■■■□ 3.2
HMGCRP04035 AP002365.1-201ENST00000603448 772 ntBASIC35.01■■■■□ 3.2
HMGCRP04035 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
HMGCRP04035 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC34.86■■■■□ 3.17
HMGCRP04035 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC34.78■■■■□ 3.16
HMGCRP04035 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
HMGCRP04035 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
HMGCRP04035 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC34.73■■■■□ 3.15
HMGCRP04035 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC34.73■■■■□ 3.15
HMGCRP04035 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC34.73■■■■□ 3.15
HMGCRP04035 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
HMGCRP04035 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC34.72■■■■□ 3.15
HMGCRP04035 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
HMGCRP04035 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
HMGCRP04035 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC34.61■■■■□ 3.13
HMGCRP04035 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC34.56■■■■□ 3.12
HMGCRP04035 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC34.56■■■■□ 3.12
HMGCRP04035 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
HMGCRP04035 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC34.54■■■■□ 3.12
HMGCRP04035 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
HMGCRP04035 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC34.47■■■■□ 3.11
HMGCRP04035 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.4■■■■□ 3.1
HMGCRP04035 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC34.34■■■■□ 3.09
HMGCRP04035 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC34.32■■■■□ 3.08
HMGCRP04035 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
HMGCRP04035 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC34.28■■■■□ 3.08
HMGCRP04035 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC34.28■■■■□ 3.08
HMGCRP04035 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
HMGCRP04035 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.26■■■■□ 3.07
HMGCRP04035 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC34.18■■■■□ 3.06
HMGCRP04035 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
HMGCRP04035 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06
HMGCRP04035 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
HMGCRP04035 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
HMGCRP04035 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC34.11■■■■□ 3.05
HMGCRP04035 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC34.09■■■■□ 3.05
HMGCRP04035 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
HMGCRP04035 DYNLL1-208ENST00000550178 581 ntBASIC34.07■■■■□ 3.04
HMGCRP04035 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
HMGCRP04035 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
HMGCRP04035 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC33.99■■■■□ 3.03
HMGCRP04035 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC33.97■■■■□ 3.03
HMGCRP04035 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
HMGCRP04035 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
HMGCRP04035 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC33.94■■■■□ 3.02
HMGCRP04035 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33.93■■■■□ 3.02
HMGCRP04035 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
HMGCRP04035 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
HMGCRP04035 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
HMGCRP04035 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC33.83■■■■□ 3.01
HMGCRP04035 AL031258.1-201ENST00000623562 325 ntBASIC33.8■■■■□ 3
HMGCRP04035 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
HMGCRP04035 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.72■■■□□ 2.99
HMGCRP04035 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC33.71■■■□□ 2.99
HMGCRP04035 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33.71■■■□□ 2.99
HMGCRP04035 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC33.7■■■□□ 2.99
HMGCRP04035 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
HMGCRP04035 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
HMGCRP04035 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC33.65■■■□□ 2.98
HMGCRP04035 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms