Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM42Q8IWZ5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM42Q8IWZ5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM42Q8IWZ5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM42Q8IWZ5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
TRIM42Q8IWZ5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM42Q8IWZ5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM42Q8IWZ5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM42Q8IWZ5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 AC104771.1-201ENST00000603335 964 ntBASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRIM42Q8IWZ5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM42Q8IWZ5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 AF201337.1-201ENST00000520239 748 ntBASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 AC133552.2-202ENST00000575694 574 ntBASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM42Q8IWZ5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 AC105036.2-201ENST00000569468 176 ntBASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms