RNA–Protein interactions for RNA: ENST00000226796.6

GAR1-201, Transcript of GAR1 ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAR1, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1-201ENST00000226796 NISCHQ9Y2I1 1504 aa49.29■■■■■ 5.48
GAR1-201ENST00000226796 CCDC180Q9P1Z9 1646 aa43.75■■■■■ 4.59
GAR1-201ENST00000226796 ABCC9O60706 1549 aa43.05■■■■■ 4.48
GAR1-201ENST00000226796 DCAF8L2P0C7V8 631 aa41.51■■■■■ 4.24
GAR1-201ENST00000226796 RB1CC1Q8TDY2 1594 aa41.31■■■■■ 4.2
GAR1-201ENST00000226796 NACADO15069 1562 aa41.23■■■■■ 4.19
GAR1-201ENST00000226796 ZCCHC6Q5VYS8 1495 aaKnown RBP41■■■■■ 4.15
GAR1-201ENST00000226796 MYO15BQ96JP2 1530 aa40.9■■■■■ 4.14
GAR1-201ENST00000226796 DCAF1Q9Y4B6 1507 aa40.71■■■■■ 4.11
GAR1-201ENST00000226796 PABPN1Q86U42 306 aaKnown RBP eCLIP40.31■■■■■ 4.04
GAR1-201ENST00000226796 UNC13AQ9UPW8 1703 aa40.23■■■■■ 4.03
GAR1-201ENST00000226796 SCRIBQ14160 1630 aa40.02■■■■■ 4
GAR1-201ENST00000226796 BICRAQ9NZM4 1560 aa39.99■■■■□ 3.99
GAR1-201ENST00000226796 DNAJC5BQ9UF47 199 aa39.58■■■■□ 3.93
GAR1-201ENST00000226796 SHROOM4Q9ULL8 1493 aa39.56■■■■□ 3.92
GAR1-201ENST00000226796 EIF4G1Q04637 1599 aaKnown RBP38.99■■■■□ 3.83
GAR1-201ENST00000226796 CC2D2AQ9P2K1 1620 aa38.85■■■■□ 3.81
GAR1-201ENST00000226796 CECR2Q9BXF3 1484 aa38.67■■■■□ 3.78
GAR1-201ENST00000226796 SMARCA4P51532 1647 aa38.23■■■■□ 3.71
GAR1-201ENST00000226796 BAZ1AQ9NRL2 1556 aaPredicted RBP38.21■■■■□ 3.71
GAR1-201ENST00000226796 ATAD2BQ9ULI0 1458 aa38.08■■■■□ 3.69
GAR1-201ENST00000226796 NCAPD3P42695 1498 aa38.07■■■■□ 3.68
GAR1-201ENST00000226796 SMARCA2P51531 1590 aa38.02■■■■□ 3.68
GAR1-201ENST00000226796 MROH2BQ7Z745 1585 aa37.99■■■■□ 3.67
GAR1-201ENST00000226796 HMGXB3Q12766 1538 aa37.82■■■■□ 3.64
GAR1-201ENST00000226796 PEG3Q9GZU2 1588 aa37.8■■■■□ 3.64
GAR1-201ENST00000226796 BAZ1BQ9UIG0 1483 aaKnown RBP37.8■■■■□ 3.64
GAR1-201ENST00000226796 RSF1Q96T23 1441 aaPredicted RBP37.57■■■■□ 3.6
GAR1-201ENST00000226796 WIZO95785 1651 aa37.56■■■■□ 3.6
GAR1-201ENST00000226796 NESP48681 1621 aa37.19■■■■□ 3.54
GAR1-201ENST00000226796 TOP2AP11388 1531 aaKnown RBP37.15■■■■□ 3.54
GAR1-201ENST00000226796 ERCC6Q03468 1493 aa37.15■■■■□ 3.54
GAR1-201ENST00000226796 LAMC3Q9Y6N6 1575 aa37.04■■■■□ 3.52
GAR1-201ENST00000226796 CADPSQ9ULU8 1353 aa37.01■■■■□ 3.51
GAR1-201ENST00000226796 PDS5BQ9NTI5 1447 aa36.9■■■■□ 3.5
GAR1-201ENST00000226796 CCDC88BA6NC98 1476 aa36.77■■■■□ 3.48
GAR1-201ENST00000226796 SUPT5HO00267 1087 aaKnown RBP36.77■■■■□ 3.48
GAR1-201ENST00000226796 CFTRP13569 1480 aa36.72■■■■□ 3.47
GAR1-201ENST00000226796 CUX2O14529 1486 aa36.68■■■■□ 3.46
GAR1-201ENST00000226796 KIF21AQ7Z4S6 1674 aa36.67■■■■□ 3.46
GAR1-201ENST00000226796 FANCD2Q9BXW9 1451 aa36.56■■■■□ 3.44
GAR1-201ENST00000226796 THOC2Q8NI27 1593 aaKnown RBP36.53■■■■□ 3.44
GAR1-201ENST00000226796 CEP164Q9UPV0 1460 aa36.52■■■■□ 3.44
GAR1-201ENST00000226796 MRC2Q9UBG0 1479 aa36.47■■■■□ 3.43
GAR1-201ENST00000226796 WDR62O43379 1518 aa36.29■■■■□ 3.4
GAR1-201ENST00000226796 PRDM2Q13029 1718 aa36.29■■■■□ 3.4
GAR1-201ENST00000226796 URB2Q14146 1524 aaKnown RBP36.16■■■■□ 3.38
GAR1-201ENST00000226796 ABCC8Q09428 1581 aa35.98■■■■□ 3.35
GAR1-201ENST00000226796 TOPBP1Q92547 1522 aa35.94■■■■□ 3.34
GAR1-201ENST00000226796 DNMBPQ6XZF7 1577 aa35.87■■■■□ 3.33
GAR1-201ENST00000226796 IFT140Q96RY7 1462 aa35.76■■■■□ 3.32
GAR1-201ENST00000226796 DNAJC5Q9H3Z4 198 aa35.73■■■■□ 3.31
GAR1-201ENST00000226796 POLA1P09884 1462 aaPredicted RBP35.64■■■■□ 3.3
GAR1-201ENST00000226796 CUX1P39880 1505 aa35.63■■■■□ 3.29
GAR1-201ENST00000226796 ZNF608Q9ULD9 1512 aaPredicted RBP35.59■■■■□ 3.29
GAR1-201ENST00000226796 SOGA1O94964 1423 aa35.57■■■■□ 3.29
GAR1-201ENST00000226796 FGD5Q6ZNL6 1462 aa35.56■■■■□ 3.28
GAR1-201ENST00000226796 RAD54L2Q9Y4B4 1467 aa35.53■■■■□ 3.28
GAR1-201ENST00000226796 TARBP1Q13395 1621 aaKnown RBP35.5■■■■□ 3.27
GAR1-201ENST00000226796 WRNQ14191 1432 aaPredicted RBP eCLIP35.45■■■■□ 3.27
GAR1-201ENST00000226796 AQRO60306 1485 aaKnown RBP eCLIP35.44■■■■□ 3.261e-6■■■■□ 23.2
GAR1-201ENST00000226796 TDRD9Q8NDG6 1382 aaKnown RBP35.39■■■■□ 3.26
GAR1-201ENST00000226796 EIF4G3O43432 1585 aaKnown RBP35.39■■■■□ 3.26
GAR1-201ENST00000226796 OSCARQ8IYS5 282 aa35.31■■■■□ 3.24
GAR1-201ENST00000226796 TOP2BQ02880 1626 aa35.29■■■■□ 3.24
GAR1-201ENST00000226796 SYNJ1O43426 1573 aa35.28■■■■□ 3.24
GAR1-201ENST00000226796 BIVM-ERCC5R4GMW8 1640 aa35.25■■■■□ 3.23
GAR1-201ENST00000226796 WDR97A6NE52 1622 aa35.2■■■■□ 3.23
GAR1-201ENST00000226796 ABCA10Q8WWZ4 1543 aa35.18■■■■□ 3.22
GAR1-201ENST00000226796 FBLN2P98095 1184 aa35.18■■■■□ 3.22
GAR1-201ENST00000226796 GRIN2BQ13224 1484 aa35.12■■■■□ 3.21
GAR1-201ENST00000226796 GAPVD1Q14C86 1478 aa35.12■■■■□ 3.21
GAR1-201ENST00000226796 SNAPC4Q5SXM2 1469 aa35.07■■■■□ 3.2
GAR1-201ENST00000226796 CHMP7Q8WUX9 453 aaPredicted RBP35.03■■■■□ 3.2
GAR1-201ENST00000226796 MAGI1Q96QZ7 1491 aaPredicted RBP35■■■■□ 3.19
GAR1-201ENST00000226796 ABCA5Q8WWZ7 1642 aa34.99■■■■□ 3.19
GAR1-201ENST00000226796 CHD1O14646 1710 aa34.94■■■■□ 3.18
GAR1-201ENST00000226796 PBRM1Q86U86 1689 aa34.93■■■■□ 3.18
GAR1-201ENST00000226796 SYNJ2O15056 1496 aa34.89■■■■□ 3.18
GAR1-201ENST00000226796 ERICH3Q5RHP9 1530 aa34.76■■■■□ 3.15
GAR1-201ENST00000226796 KIF27Q86VH2 1401 aa34.74■■■■□ 3.15
GAR1-201ENST00000226796 TRIM41Q8WV44 630 aa34.72■■■■□ 3.15
GAR1-201ENST00000226796 FHAD1B1AJZ9 1412 aa34.72■■■■□ 3.15
GAR1-201ENST00000226796 ADAMTS12P58397 1594 aa34.67■■■■□ 3.14
GAR1-201ENST00000226796 GRIN2AQ12879 1464 aa34.65■■■■□ 3.14
GAR1-201ENST00000226796 IGF1RP08069 1367 aa34.6■■■■□ 3.13
GAR1-201ENST00000226796 ARHGEF11O15085 1522 aa34.59■■■■□ 3.13
GAR1-201ENST00000226796 RIMBP3CA6NJZ7 1639 aa34.57■■■■□ 3.12
GAR1-201ENST00000226796 RIMBP3BA6NNM3 1639 aa34.57■■■■□ 3.12
GAR1-201ENST00000226796 RIMBP3Q9UFD9 1639 aa34.57■■■■□ 3.12
GAR1-201ENST00000226796 CLASP1Q7Z460 1538 aa34.56■■■■□ 3.12
GAR1-201ENST00000226796 NUP160Q12769 1436 aa34.47■■■■□ 3.11
GAR1-201ENST00000226796 CYB5RLQ6IPT4 315 aa34.44■■■■□ 3.1
GAR1-201ENST00000226796 CEP170Q5SW79 1584 aa34.44■■■■□ 3.1
GAR1-201ENST00000226796 CARMIL1Q5VZK9 1371 aa34.41■■■■□ 3.1
GAR1-201ENST00000226796 CUL7Q14999 1698 aa34.41■■■■□ 3.1
GAR1-201ENST00000226796 RUSC2Q8N2Y8 1516 aa34.37■■■■□ 3.09
GAR1-201ENST00000226796 ARAP1Q96P48 1450 aa34.29■■■■□ 3.08
GAR1-201ENST00000226796 JPH4Q96JJ6 628 aa34.26■■■■□ 3.08
GAR1-201ENST00000226796 CHIC1Q5VXU3 224 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms