RNA–Protein interactions for RNA: ENST00000264266.12

MFSD1-201, Transcript of major facilitator superfamily domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MFSD1, Length 1,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD1-201ENST00000264266 NISCHQ9Y2I1 1504 aa43.97■■■■■ 4.63
MFSD1-201ENST00000264266 CCDC180Q9P1Z9 1646 aa39.02■■■■□ 3.84
MFSD1-201ENST00000264266 ABCC9O60706 1549 aa38.1■■■■□ 3.69
MFSD1-201ENST00000264266 ZCCHC6Q5VYS8 1495 aaKnown RBP36.71■■■■□ 3.47
MFSD1-201ENST00000264266 DCAF8L2P0C7V8 631 aa36.69■■■■□ 3.46
MFSD1-201ENST00000264266 RB1CC1Q8TDY2 1594 aa36.63■■■■□ 3.45
MFSD1-201ENST00000264266 NACADO15069 1562 aa36.59■■■■□ 3.45
MFSD1-201ENST00000264266 MYO15BQ96JP2 1530 aa36.36■■■■□ 3.41
MFSD1-201ENST00000264266 DCAF1Q9Y4B6 1507 aa36.31■■■■□ 3.4
MFSD1-201ENST00000264266 UNC13AQ9UPW8 1703 aa35.92■■■■□ 3.34
MFSD1-201ENST00000264266 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
MFSD1-201ENST00000264266 PABPN1Q86U42 306 aaKnown RBP eCLIP35.6■■■■□ 3.29
MFSD1-201ENST00000264266 BICRAQ9NZM4 1560 aa35.58■■■■□ 3.29
MFSD1-201ENST00000264266 SHROOM4Q9ULL8 1493 aa35.06■■■■□ 3.2
MFSD1-201ENST00000264266 DNAJC5BQ9UF47 199 aa34.74■■■■□ 3.15
MFSD1-201ENST00000264266 EIF4G1Q04637 1599 aaKnown RBP34.61■■■■□ 3.13
MFSD1-201ENST00000264266 CC2D2AQ9P2K1 1620 aa34.45■■■■□ 3.1
MFSD1-201ENST00000264266 CECR2Q9BXF3 1484 aa34.3■■■■□ 3.08
MFSD1-201ENST00000264266 SMARCA4P51532 1647 aa34.13■■■■□ 3.05
MFSD1-201ENST00000264266 BAZ1AQ9NRL2 1556 aaPredicted RBP34.06■■■■□ 3.04
MFSD1-201ENST00000264266 MROH2BQ7Z745 1585 aa33.95■■■■□ 3.03
MFSD1-201ENST00000264266 ATAD2BQ9ULI0 1458 aa33.85■■■■□ 3.01
MFSD1-201ENST00000264266 SMARCA2P51531 1590 aa33.8■■■■□ 3
MFSD1-201ENST00000264266 NCAPD3P42695 1498 aa33.74■■■□□ 2.99
MFSD1-201ENST00000264266 PEG3Q9GZU2 1588 aa33.72■■■□□ 2.99
MFSD1-201ENST00000264266 HMGXB3Q12766 1538 aa33.66■■■□□ 2.98
MFSD1-201ENST00000264266 WIZO95785 1651 aa33.63■■■□□ 2.97
MFSD1-201ENST00000264266 BAZ1BQ9UIG0 1483 aaKnown RBP33.62■■■□□ 2.97
MFSD1-201ENST00000264266 RSF1Q96T23 1441 aaPredicted RBP33.58■■■□□ 2.97
MFSD1-201ENST00000264266 SUPT5HO00267 1087 aaKnown RBP33.39■■■□□ 2.94
MFSD1-201ENST00000264266 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
MFSD1-201ENST00000264266 NESP48681 1621 aa33.03■■■□□ 2.88
MFSD1-201ENST00000264266 LAMC3Q9Y6N6 1575 aa32.88■■■□□ 2.85
MFSD1-201ENST00000264266 CCDC88BA6NC98 1476 aa32.82■■■□□ 2.84
MFSD1-201ENST00000264266 ERCC6Q03468 1493 aa32.79■■■□□ 2.84
MFSD1-201ENST00000264266 CADPSQ9ULU8 1353 aa32.79■■■□□ 2.84
MFSD1-201ENST00000264266 KIF21AQ7Z4S6 1674 aa32.68■■■□□ 2.82
MFSD1-201ENST00000264266 CFTRP13569 1480 aa32.65■■■□□ 2.82
MFSD1-201ENST00000264266 PDS5BQ9NTI5 1447 aa32.61■■■□□ 2.81
MFSD1-201ENST00000264266 PRDM2Q13029 1718 aa32.51■■■□□ 2.79
MFSD1-201ENST00000264266 THOC2Q8NI27 1593 aaKnown RBP32.49■■■□□ 2.79
MFSD1-201ENST00000264266 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
MFSD1-201ENST00000264266 CEP164Q9UPV0 1460 aa32.43■■■□□ 2.78
MFSD1-201ENST00000264266 MRC2Q9UBG0 1479 aa32.34■■■□□ 2.77
MFSD1-201ENST00000264266 CUX2O14529 1486 aa32.29■■■□□ 2.76
MFSD1-201ENST00000264266 WDR62O43379 1518 aa32.23■■■□□ 2.75
MFSD1-201ENST00000264266 URB2Q14146 1524 aaKnown RBP32.18■■■□□ 2.74
MFSD1-201ENST00000264266 CHIC1Q5VXU3 224 aa32.02■■■□□ 2.72
MFSD1-201ENST00000264266 TOPBP1Q92547 1522 aa31.99■■■□□ 2.71
MFSD1-201ENST00000264266 DNMBPQ6XZF7 1577 aa31.97■■■□□ 2.71
MFSD1-201ENST00000264266 ABCC8Q09428 1581 aa31.86■■■□□ 2.69
MFSD1-201ENST00000264266 CUX1P39880 1505 aa31.85■■■□□ 2.69
MFSD1-201ENST00000264266 POLA1P09884 1462 aaPredicted RBP31.74■■■□□ 2.67
MFSD1-201ENST00000264266 FGD5Q6ZNL6 1462 aa31.71■■■□□ 2.67
MFSD1-201ENST00000264266 IFT140Q96RY7 1462 aa31.69■■■□□ 2.66
MFSD1-201ENST00000264266 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
MFSD1-201ENST00000264266 SYNJ1O43426 1573 aa31.66■■■□□ 2.66
MFSD1-201ENST00000264266 TARBP1Q13395 1621 aaKnown RBP31.64■■■□□ 2.66
MFSD1-201ENST00000264266 RAD54L2Q9Y4B4 1467 aa31.63■■■□□ 2.65
MFSD1-201ENST00000264266 ZNF608Q9ULD9 1512 aaPredicted RBP31.63■■■□□ 2.65
MFSD1-201ENST00000264266 BIVM-ERCC5R4GMW8 1640 aa31.59■■■□□ 2.65
MFSD1-201ENST00000264266 TOP2BQ02880 1626 aa31.59■■■□□ 2.65
MFSD1-201ENST00000264266 SOGA1O94964 1423 aa31.54■■■□□ 2.64
MFSD1-201ENST00000264266 EIF4G3O43432 1585 aaKnown RBP31.54■■■□□ 2.64
MFSD1-201ENST00000264266 WDR97A6NE52 1622 aa31.47■■■□□ 2.63
MFSD1-201ENST00000264266 AQRO60306 1485 aaKnown RBP eCLIP31.44■■■□□ 2.62
MFSD1-201ENST00000264266 TRIM41Q8WV44 630 aa31.43■■■□□ 2.62
MFSD1-201ENST00000264266 TDRD9Q8NDG6 1382 aaKnown RBP31.4■■■□□ 2.62
MFSD1-201ENST00000264266 ABCA10Q8WWZ4 1543 aa31.35■■■□□ 2.61
MFSD1-201ENST00000264266 ABCA5Q8WWZ7 1642 aa31.27■■■□□ 2.6
MFSD1-201ENST00000264266 PBRM1Q86U86 1689 aa31.23■■■□□ 2.59
MFSD1-201ENST00000264266 GAPVD1Q14C86 1478 aa31.22■■■□□ 2.59
MFSD1-201ENST00000264266 SNAPC4Q5SXM2 1469 aa31.18■■■□□ 2.58
MFSD1-201ENST00000264266 GRIN2BQ13224 1484 aa31.17■■■□□ 2.58
MFSD1-201ENST00000264266 CHD1O14646 1710 aa31.12■■■□□ 2.57
MFSD1-201ENST00000264266 MAGI1Q96QZ7 1491 aaPredicted RBP31.07■■■□□ 2.56
MFSD1-201ENST00000264266 DNAJC5Q9H3Z4 198 aa31.05■■■□□ 2.56
MFSD1-201ENST00000264266 FBLN2P98095 1184 aa31.01■■■□□ 2.56
MFSD1-201ENST00000264266 ADAMTS12P58397 1594 aa30.98■■■□□ 2.55
MFSD1-201ENST00000264266 ERICH3Q5RHP9 1530 aa30.96■■■□□ 2.55
MFSD1-201ENST00000264266 SYNJ2O15056 1496 aa30.96■■■□□ 2.55
MFSD1-201ENST00000264266 KIF27Q86VH2 1401 aa30.94■■■□□ 2.54
MFSD1-201ENST00000264266 OSCARQ8IYS5 282 aa30.93■■■□□ 2.54
MFSD1-201ENST00000264266 CHMP7Q8WUX9 453 aaPredicted RBP30.89■■■□□ 2.54
MFSD1-201ENST00000264266 RUSC2Q8N2Y8 1516 aa30.83■■■□□ 2.53
MFSD1-201ENST00000264266 FHAD1B1AJZ9 1412 aa30.83■■■□□ 2.53
MFSD1-201ENST00000264266 GRIN2AQ12879 1464 aa30.81■■■□□ 2.52
MFSD1-201ENST00000264266 FAM9AQ8IZU1 332 aaPredicted RBP30.8■■■□□ 2.52
MFSD1-201ENST00000264266 IGF1RP08069 1367 aa30.78■■■□□ 2.52
MFSD1-201ENST00000264266 CUL7Q14999 1698 aa30.75■■■□□ 2.51
MFSD1-201ENST00000264266 LOC105371045A0A1W2PR82 267 aa30.75■■■□□ 2.51
MFSD1-201ENST00000264266 CLASP1Q7Z460 1538 aa30.72■■■□□ 2.51
MFSD1-201ENST00000264266 CEP170Q5SW79 1584 aa30.7■■■□□ 2.51
MFSD1-201ENST00000264266 EEA1Q15075 1411 aa30.7■■■□□ 2.5
MFSD1-201ENST00000264266 NUP160Q12769 1436 aa30.64■■■□□ 2.5
MFSD1-201ENST00000264266 CARMIL1Q5VZK9 1371 aa30.62■■■□□ 2.49
MFSD1-201ENST00000264266 RIMBP3CA6NJZ7 1639 aa30.58■■■□□ 2.49
MFSD1-201ENST00000264266 RIMBP3BA6NNM3 1639 aa30.58■■■□□ 2.49
MFSD1-201ENST00000264266 RIMBP3Q9UFD9 1639 aa30.58■■■□□ 2.49
MFSD1-201ENST00000264266 ARHGEF11O15085 1522 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms