RNA–Protein interactions for RNA: ENST00000455372.2

SLC39A3-202, Transcript of solute carrier family 39 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC39A3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-202ENST00000455372 NISCHQ9Y2I1 1504 aa38.9■■■■□ 3.82
SLC39A3-202ENST00000455372 CCDC180Q9P1Z9 1646 aa33.28■■■□□ 2.92
SLC39A3-202ENST00000455372 ZCCHC6Q5VYS8 1495 aaKnown RBP32.86■■■□□ 2.85
SLC39A3-202ENST00000455372 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
SLC39A3-202ENST00000455372 DCAF8L2P0C7V8 631 aa32.15■■■□□ 2.74
SLC39A3-202ENST00000455372 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
SLC39A3-202ENST00000455372 DCAF1Q9Y4B6 1507 aa31.98■■■□□ 2.71
SLC39A3-202ENST00000455372 MYO15BQ96JP2 1530 aa31.18■■■□□ 2.58
SLC39A3-202ENST00000455372 CHIC1Q5VXU3 224 aa31.06■■■□□ 2.56
SLC39A3-202ENST00000455372 SCRIBQ14160 1630 aa31.04■■■□□ 2.56
SLC39A3-202ENST00000455372 ABCC9O60706 1549 aa30.96■■■□□ 2.55
SLC39A3-202ENST00000455372 NACADO15069 1562 aa30.8■■■□□ 2.52
SLC39A3-202ENST00000455372 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
SLC39A3-202ENST00000455372 RB1CC1Q8TDY2 1594 aa30.34■■■□□ 2.45
SLC39A3-202ENST00000455372 CECR2Q9BXF3 1484 aa30.32■■■□□ 2.44
SLC39A3-202ENST00000455372 MROH2BQ7Z745 1585 aa30.21■■■□□ 2.43
SLC39A3-202ENST00000455372 LOC105371045A0A1W2PR82 267 aa30.08■■■□□ 2.41
SLC39A3-202ENST00000455372 WIZO95785 1651 aa30.03■■■□□ 2.4
SLC39A3-202ENST00000455372 UNC13AQ9UPW8 1703 aa29.92■■■□□ 2.38
SLC39A3-202ENST00000455372 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
SLC39A3-202ENST00000455372 TRIM41Q8WV44 630 aa29.89■■■□□ 2.38
SLC39A3-202ENST00000455372 PCGF6Q9BYE7 350 aa29.73■■■□□ 2.35
SLC39A3-202ENST00000455372 SMARCA4P51532 1647 aa29.7■■■□□ 2.34
SLC39A3-202ENST00000455372 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
SLC39A3-202ENST00000455372 FAM9AQ8IZU1 332 aaPredicted RBP29.58■■■□□ 2.33
SLC39A3-202ENST00000455372 HRCP23327 699 aa29.57■■■□□ 2.32
SLC39A3-202ENST00000455372 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
SLC39A3-202ENST00000455372 BICRAQ9NZM4 1560 aa29.54■■■□□ 2.32
SLC39A3-202ENST00000455372 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
SLC39A3-202ENST00000455372 CCDC88BA6NC98 1476 aa29.42■■■□□ 2.3
SLC39A3-202ENST00000455372 SMARCA2P51531 1590 aa29.41■■■□□ 2.3
SLC39A3-202ENST00000455372 TRIM26Q12899 539 aaPredicted RBP29.29■■■□□ 2.28
SLC39A3-202ENST00000455372 EHMT2Q96KQ7 1210 aa29.28■■■□□ 2.28
SLC39A3-202ENST00000455372 ABCC8Q09428 1581 aa29.23■■■□□ 2.27
SLC39A3-202ENST00000455372 PEG3Q9GZU2 1588 aa29.18■■■□□ 2.26
SLC39A3-202ENST00000455372 ATAD2BQ9ULI0 1458 aa28.98■■■□□ 2.23
SLC39A3-202ENST00000455372 PPARGC1BQ86YN6 1023 aaKnown RBP28.96■■■□□ 2.23
SLC39A3-202ENST00000455372 SOGA1O94964 1423 aa28.88■■■□□ 2.21
SLC39A3-202ENST00000455372 BAZ1BQ9UIG0 1483 aaKnown RBP28.88■■■□□ 2.21
SLC39A3-202ENST00000455372 WRNQ14191 1432 aaPredicted RBP eCLIP28.79■■■□□ 2.2
SLC39A3-202ENST00000455372 RUSC2Q8N2Y8 1516 aa28.76■■■□□ 2.19
SLC39A3-202ENST00000455372 EEA1Q15075 1411 aa28.74■■■□□ 2.19
SLC39A3-202ENST00000455372 CSRNP3Q8WYN3 585 aa28.68■■■□□ 2.18
SLC39A3-202ENST00000455372 SYNJ1O43426 1573 aa28.68■■■□□ 2.18
SLC39A3-202ENST00000455372 CEP162Q5TB80 1403 aa28.62■■■□□ 2.17
SLC39A3-202ENST00000455372 TNIKQ9UKE5 1360 aa28.62■■■□□ 2.17
SLC39A3-202ENST00000455372 GOLGA3Q08378 1498 aa28.51■■■□□ 2.15
SLC39A3-202ENST00000455372 ZEB1P37275 1124 aaPredicted RBP28.51■■■□□ 2.15
SLC39A3-202ENST00000455372 UBTFP17480 764 aaKnown RBP28.49■■■□□ 2.15
SLC39A3-202ENST00000455372 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
SLC39A3-202ENST00000455372 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
SLC39A3-202ENST00000455372 CEP164Q9UPV0 1460 aa28.39■■■□□ 2.13
SLC39A3-202ENST00000455372 KIF21BO75037 1637 aa28.38■■■□□ 2.13
SLC39A3-202ENST00000455372 TOP2BQ02880 1626 aa28.38■■■□□ 2.13
SLC39A3-202ENST00000455372 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
SLC39A3-202ENST00000455372 TTBK1Q5TCY1 1321 aaPredicted RBP28.27■■■□□ 2.12
SLC39A3-202ENST00000455372 RAPGEF2Q9Y4G8 1499 aa28.21■■■□□ 2.11
SLC39A3-202ENST00000455372 CFTRP13569 1480 aa28.18■■■□□ 2.1
SLC39A3-202ENST00000455372 CLIP1P30622 1438 aa28.16■■■□□ 2.1
SLC39A3-202ENST00000455372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.15■■■□□ 2.1
SLC39A3-202ENST00000455372 CUX1P39880 1505 aa28.15■■■□□ 2.1
SLC39A3-202ENST00000455372 CCER1Q8TC90 406 aaPredicted RBP28.05■■■□□ 2.08
SLC39A3-202ENST00000455372 VPS8Q8N3P4 1428 aa28.01■■■□□ 2.07
SLC39A3-202ENST00000455372 PRXQ9BXM0 1461 aa28■■■□□ 2.07
SLC39A3-202ENST00000455372 PRDM2Q13029 1718 aa27.99■■■□□ 2.07
SLC39A3-202ENST00000455372 ERICH3Q5RHP9 1530 aa27.98■■■□□ 2.07
SLC39A3-202ENST00000455372 RANGAP1P46060 587 aaPredicted RBP27.95■■■□□ 2.06
SLC39A3-202ENST00000455372 KIF27Q86VH2 1401 aa27.92■■■□□ 2.06
SLC39A3-202ENST00000455372 CC2D2AQ9P2K1 1620 aa27.91■■■□□ 2.06
SLC39A3-202ENST00000455372 CADPSQ9ULU8 1353 aa27.89■■■□□ 2.06
SLC39A3-202ENST00000455372 APLP2Q06481 763 aa27.78■■■□□ 2.04
SLC39A3-202ENST00000455372 ARAP1Q96P48 1450 aa27.77■■■□□ 2.04
SLC39A3-202ENST00000455372 CUX2O14529 1486 aa27.71■■■□□ 2.03
SLC39A3-202ENST00000455372 FGD5Q6ZNL6 1462 aa27.68■■■□□ 2.02
SLC39A3-202ENST00000455372 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
SLC39A3-202ENST00000455372 IGF1RP08069 1367 aa27.65■■■□□ 2.02
SLC39A3-202ENST00000455372 FANCD2Q9BXW9 1451 aa27.62■■■□□ 2.01
SLC39A3-202ENST00000455372 ARHGAP35Q9NRY4 1499 aa27.57■■■□□ 2
SLC39A3-202ENST00000455372 KANK4Q5T7N3 995 aaPredicted RBP27.52■■■□□ 2
SLC39A3-202ENST00000455372 CARMIL1Q5VZK9 1371 aa27.51■■■□□ 2
SLC39A3-202ENST00000455372 NESP48681 1621 aa27.5■■□□□ 1.99
SLC39A3-202ENST00000455372 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
SLC39A3-202ENST00000455372 TOPBP1Q92547 1522 aa27.43■■□□□ 1.98
SLC39A3-202ENST00000455372 RAD54L2Q9Y4B4 1467 aa27.42■■□□□ 1.98
SLC39A3-202ENST00000455372 POLA1P09884 1462 aaPredicted RBP27.4■■□□□ 1.98
SLC39A3-202ENST00000455372 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
SLC39A3-202ENST00000455372 DIEXFQ68CQ4 756 aaKnown RBP27.33■■□□□ 1.97
SLC39A3-202ENST00000455372 RRBP1Q9P2E9 1410 aaKnown RBP27.32■■□□□ 1.96
SLC39A3-202ENST00000455372 LAMC3Q9Y6N6 1575 aa27.32■■□□□ 1.96
SLC39A3-202ENST00000455372 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
SLC39A3-202ENST00000455372 ZNF316A6NFI3 1004 aaPredicted RBP27.23■■□□□ 1.95
SLC39A3-202ENST00000455372 TIAM1Q13009 1591 aa27.23■■□□□ 1.95
SLC39A3-202ENST00000455372 DNAJC5BQ9UF47 199 aa27.22■■□□□ 1.95
SLC39A3-202ENST00000455372 MAP3K1Q13233 1512 aa27.21■■□□□ 1.95
SLC39A3-202ENST00000455372 CCNB3Q8WWL7 1395 aa27.2■■□□□ 1.95
SLC39A3-202ENST00000455372 CUL7Q14999 1698 aa27.19■■□□□ 1.94
SLC39A3-202ENST00000455372 WDR97A6NE52 1622 aa27.18■■□□□ 1.94
SLC39A3-202ENST00000455372 DHX57Q6P158 1386 aaKnown RBP27.17■■□□□ 1.94
SLC39A3-202ENST00000455372 P3H3Q8IVL6 736 aa27.15■■□□□ 1.94
SLC39A3-202ENST00000455372 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms