RNA–Protein interactions for RNA: ENST00000376285.5

PCCA-202, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCCA, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-202ENST00000376285 NISCHQ9Y2I1 1504 aa39.91■■■■□ 3.98
PCCA-202ENST00000376285 CCDC180Q9P1Z9 1646 aa34.57■■■■□ 3.13
PCCA-202ENST00000376285 ZCCHC6Q5VYS8 1495 aaKnown RBP33.64■■■□□ 2.98
PCCA-202ENST00000376285 SHROOM4Q9ULL8 1493 aa33.01■■■□□ 2.87
PCCA-202ENST00000376285 DCAF1Q9Y4B6 1507 aa32.94■■■□□ 2.86
PCCA-202ENST00000376285 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
PCCA-202ENST00000376285 MYO15BQ96JP2 1530 aa32.34■■■□□ 2.77
PCCA-202ENST00000376285 ABCC9O60706 1549 aa32.3■■■□□ 2.76
PCCA-202ENST00000376285 NACADO15069 1562 aa32.04■■■□□ 2.72
PCCA-202ENST00000376285 SUPT5HO00267 1087 aaKnown RBP31.96■■■□□ 2.71
PCCA-202ENST00000376285 SCRIBQ14160 1630 aa31.94■■■□□ 2.7
PCCA-202ENST00000376285 RB1CC1Q8TDY2 1594 aa31.67■■■□□ 2.66
PCCA-202ENST00000376285 UNC13AQ9UPW8 1703 aa31.25■■■□□ 2.59
PCCA-202ENST00000376285 RSF1Q96T23 1441 aaPredicted RBP31.16■■■□□ 2.58
PCCA-202ENST00000376285 CECR2Q9BXF3 1484 aa31.03■■■□□ 2.56
PCCA-202ENST00000376285 CHIC1Q5VXU3 224 aa31.02■■■□□ 2.56
PCCA-202ENST00000376285 MROH2BQ7Z745 1585 aa30.91■■■□□ 2.54
PCCA-202ENST00000376285 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
PCCA-202ENST00000376285 BAZ1AQ9NRL2 1556 aaPredicted RBP30.77■■■□□ 2.52
PCCA-202ENST00000376285 WIZO95785 1651 aa30.74■■■□□ 2.51
PCCA-202ENST00000376285 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
PCCA-202ENST00000376285 PABPN1Q86U42 306 aaKnown RBP eCLIP30.56■■■□□ 2.48
PCCA-202ENST00000376285 TOP2AP11388 1531 aaKnown RBP30.33■■■□□ 2.45
PCCA-202ENST00000376285 PEG3Q9GZU2 1588 aa30.18■■■□□ 2.42
PCCA-202ENST00000376285 SMARCA2P51531 1590 aa30.11■■■□□ 2.41
PCCA-202ENST00000376285 EIF4G1Q04637 1599 aaKnown RBP30.09■■■□□ 2.41
PCCA-202ENST00000376285 CCDC88BA6NC98 1476 aa30.04■■■□□ 2.4
PCCA-202ENST00000376285 LOC105371045A0A1W2PR82 267 aa30.01■■■□□ 2.39
PCCA-202ENST00000376285 TRIM41Q8WV44 630 aa29.95■■■□□ 2.39
PCCA-202ENST00000376285 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
PCCA-202ENST00000376285 BAZ1BQ9UIG0 1483 aaKnown RBP29.81■■■□□ 2.36
PCCA-202ENST00000376285 PCGF6Q9BYE7 350 aa29.66■■■□□ 2.34
PCCA-202ENST00000376285 ABCC8Q09428 1581 aa29.65■■■□□ 2.34
PCCA-202ENST00000376285 HMGXB3Q12766 1538 aa29.59■■■□□ 2.33
PCCA-202ENST00000376285 NCAPD3P42695 1498 aa29.57■■■□□ 2.32
PCCA-202ENST00000376285 HRCP23327 699 aa29.52■■■□□ 2.32
PCCA-202ENST00000376285 FAM9AQ8IZU1 332 aaPredicted RBP29.5■■■□□ 2.31
PCCA-202ENST00000376285 WRNQ14191 1432 aaPredicted RBP eCLIP29.31■■■□□ 2.28
PCCA-202ENST00000376285 CC2D2AQ9P2K1 1620 aa29.26■■■□□ 2.27
PCCA-202ENST00000376285 TRIM26Q12899 539 aaPredicted RBP29.26■■■□□ 2.27
PCCA-202ENST00000376285 SYNJ1O43426 1573 aa29.24■■■□□ 2.27
PCCA-202ENST00000376285 EHMT2Q96KQ7 1210 aa29.17■■■□□ 2.26
PCCA-202ENST00000376285 SOGA1O94964 1423 aa29.15■■■□□ 2.26
PCCA-202ENST00000376285 EEA1Q15075 1411 aa29.08■■■□□ 2.25
PCCA-202ENST00000376285 CFTRP13569 1480 aa29.08■■■□□ 2.25
PCCA-202ENST00000376285 PRDM2Q13029 1718 aa29.07■■■□□ 2.24
PCCA-202ENST00000376285 RUSC2Q8N2Y8 1516 aa29.05■■■□□ 2.24
PCCA-202ENST00000376285 TOP2BQ02880 1626 aa29.04■■■□□ 2.24
PCCA-202ENST00000376285 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
PCCA-202ENST00000376285 CSRNP3Q8WYN3 585 aa28.92■■■□□ 2.22
PCCA-202ENST00000376285 PPARGC1BQ86YN6 1023 aaKnown RBP28.87■■■□□ 2.21
PCCA-202ENST00000376285 CUX1P39880 1505 aa28.86■■■□□ 2.21
PCCA-202ENST00000376285 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
PCCA-202ENST00000376285 KIF21BO75037 1637 aa28.77■■■□□ 2.2
PCCA-202ENST00000376285 GOLGA3Q08378 1498 aa28.76■■■□□ 2.19
PCCA-202ENST00000376285 TNIKQ9UKE5 1360 aa28.75■■■□□ 2.19
PCCA-202ENST00000376285 CEP164Q9UPV0 1460 aa28.7■■■□□ 2.19
PCCA-202ENST00000376285 CEP162Q5TB80 1403 aa28.68■■■□□ 2.18
PCCA-202ENST00000376285 UBTFP17480 764 aaKnown RBP28.61■■■□□ 2.17
PCCA-202ENST00000376285 FANCD2Q9BXW9 1451 aa28.57■■■□□ 2.16
PCCA-202ENST00000376285 NESP48681 1621 aa28.55■■■□□ 2.16
PCCA-202ENST00000376285 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
PCCA-202ENST00000376285 LAMC3Q9Y6N6 1575 aa28.52■■■□□ 2.16
PCCA-202ENST00000376285 KIF27Q86VH2 1401 aa28.49■■■□□ 2.15
PCCA-202ENST00000376285 ZEB1P37275 1124 aaPredicted RBP28.49■■■□□ 2.15
PCCA-202ENST00000376285 ERICH3Q5RHP9 1530 aa28.46■■■□□ 2.15
PCCA-202ENST00000376285 PRXQ9BXM0 1461 aa28.45■■■□□ 2.15
PCCA-202ENST00000376285 FGD5Q6ZNL6 1462 aa28.45■■■□□ 2.14
PCCA-202ENST00000376285 DNMBPQ6XZF7 1577 aa28.41■■■□□ 2.14
PCCA-202ENST00000376285 DNAJC5BQ9UF47 199 aa28.41■■■□□ 2.14
PCCA-202ENST00000376285 CUX2O14529 1486 aa28.35■■■□□ 2.13
PCCA-202ENST00000376285 TOPBP1Q92547 1522 aa28.34■■■□□ 2.13
PCCA-202ENST00000376285 CLIP1P30622 1438 aa28.32■■■□□ 2.12
PCCA-202ENST00000376285 POLA1P09884 1462 aaPredicted RBP28.25■■■□□ 2.11
PCCA-202ENST00000376285 KIF21AQ7Z4S6 1674 aa28.25■■■□□ 2.11
PCCA-202ENST00000376285 PDS5BQ9NTI5 1447 aa28.23■■■□□ 2.11
PCCA-202ENST00000376285 URB2Q14146 1524 aaKnown RBP28.22■■■□□ 2.11
PCCA-202ENST00000376285 IGF1RP08069 1367 aa28.2■■■□□ 2.11
PCCA-202ENST00000376285 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
PCCA-202ENST00000376285 RAD54L2Q9Y4B4 1467 aa28.18■■■□□ 2.1
PCCA-202ENST00000376285 TTBK1Q5TCY1 1321 aaPredicted RBP28.17■■■□□ 2.1
PCCA-202ENST00000376285 VPS8Q8N3P4 1428 aa28.15■■■□□ 2.1
PCCA-202ENST00000376285 WDR97A6NE52 1622 aa28.13■■■□□ 2.09
PCCA-202ENST00000376285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.08■■■□□ 2.09
PCCA-202ENST00000376285 RANGAP1P46060 587 aaPredicted RBP28.08■■■□□ 2.09
PCCA-202ENST00000376285 CARMIL1Q5VZK9 1371 aa28.07■■■□□ 2.08
PCCA-202ENST00000376285 ARAP1Q96P48 1450 aa28.03■■■□□ 2.08
PCCA-202ENST00000376285 CCER1Q8TC90 406 aaPredicted RBP27.99■■■□□ 2.07
PCCA-202ENST00000376285 CUL7Q14999 1698 aa27.98■■■□□ 2.07
PCCA-202ENST00000376285 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
PCCA-202ENST00000376285 ARHGAP35Q9NRY4 1499 aa27.92■■■□□ 2.06
PCCA-202ENST00000376285 TARBP1Q13395 1621 aaKnown RBP27.9■■■□□ 2.06
PCCA-202ENST00000376285 MRC2Q9UBG0 1479 aa27.88■■■□□ 2.05
PCCA-202ENST00000376285 TDRD9Q8NDG6 1382 aaKnown RBP27.83■■■□□ 2.05
PCCA-202ENST00000376285 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.05
PCCA-202ENST00000376285 APLP2Q06481 763 aa27.82■■■□□ 2.04
PCCA-202ENST00000376285 CTTNBP2Q8WZ74 1663 aa27.81■■■□□ 2.04
PCCA-202ENST00000376285 WDR62O43379 1518 aa27.74■■■□□ 2.03
PCCA-202ENST00000376285 PBRM1Q86U86 1689 aa27.73■■■□□ 2.03
PCCA-202ENST00000376285 EFCAB5A4FU69 1503 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms