RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 NISCHQ9Y2I1 1504 aa44.59■■■■■ 4.73
SBDS-201ENST00000246868 CCDC180Q9P1Z9 1646 aa39.21■■■■□ 3.87
SBDS-201ENST00000246868 ABCC9O60706 1549 aa37.48■■■■□ 3.59
SBDS-201ENST00000246868 ZCCHC6Q5VYS8 1495 aaKnown RBP37.34■■■■□ 3.57
SBDS-201ENST00000246868 DCAF8L2P0C7V8 631 aa36.98■■■■□ 3.51
SBDS-201ENST00000246868 DCAF1Q9Y4B6 1507 aa36.92■■■■□ 3.5
SBDS-201ENST00000246868 MYO15BQ96JP2 1530 aa36.71■■■■□ 3.47
SBDS-201ENST00000246868 NACADO15069 1562 aa36.65■■■■□ 3.46
SBDS-201ENST00000246868 RB1CC1Q8TDY2 1594 aa36.47■■■■□ 3.43
SBDS-201ENST00000246868 SHROOM4Q9ULL8 1493 aa35.9■■■■□ 3.34
SBDS-201ENST00000246868 SCRIBQ14160 1630 aa35.9■■■■□ 3.34
SBDS-201ENST00000246868 UNC13AQ9UPW8 1703 aa35.63■■■■□ 3.29
SBDS-201ENST00000246868 BICRAQ9NZM4 1560 aa35.26■■■■□ 3.24
SBDS-201ENST00000246868 PABPN1Q86U42 306 aaKnown RBP eCLIP35.19■■■■□ 3.22
SBDS-201ENST00000246868 CECR2Q9BXF3 1484 aa34.62■■■■□ 3.13
SBDS-201ENST00000246868 BAZ1AQ9NRL2 1556 aaPredicted RBP34.52■■■■□ 3.12
SBDS-201ENST00000246868 SMARCA4P51532 1647 aa34.4■■■■□ 3.1
SBDS-201ENST00000246868 MROH2BQ7Z745 1585 aa34.38■■■■□ 3.09
SBDS-201ENST00000246868 RSF1Q96T23 1441 aaPredicted RBP34.34■■■■□ 3.09
SBDS-201ENST00000246868 SUPT5HO00267 1087 aaKnown RBP34.3■■■■□ 3.08
SBDS-201ENST00000246868 EIF4G1Q04637 1599 aaKnown RBP34.3■■■■□ 3.08
SBDS-201ENST00000246868 WIZO95785 1651 aa34.07■■■■□ 3.04
SBDS-201ENST00000246868 PEG3Q9GZU2 1588 aa34.02■■■■□ 3.04
SBDS-201ENST00000246868 SMARCA2P51531 1590 aa34■■■■□ 3.03
SBDS-201ENST00000246868 ATAD2BQ9ULI0 1458 aa33.96■■■■□ 3.03
SBDS-201ENST00000246868 CC2D2AQ9P2K1 1620 aa33.93■■■■□ 3.02
SBDS-201ENST00000246868 NCAPD3P42695 1498 aa33.78■■■■□ 3
SBDS-201ENST00000246868 BAZ1BQ9UIG0 1483 aaKnown RBP33.78■■■■□ 3
SBDS-201ENST00000246868 TOP2AP11388 1531 aaKnown RBP33.76■■■■□ 3
SBDS-201ENST00000246868 HMGXB3Q12766 1538 aa33.72■■■□□ 2.99
SBDS-201ENST00000246868 DNAJC5BQ9UF47 199 aa33.46■■■□□ 2.95
SBDS-201ENST00000246868 CCDC88BA6NC98 1476 aa33.37■■■□□ 2.93
SBDS-201ENST00000246868 CADPSQ9ULU8 1353 aa32.89■■■□□ 2.85
SBDS-201ENST00000246868 CFTRP13569 1480 aa32.87■■■□□ 2.85
SBDS-201ENST00000246868 LAMC3Q9Y6N6 1575 aa32.76■■■□□ 2.84
SBDS-201ENST00000246868 PRDM2Q13029 1718 aa32.73■■■□□ 2.83
SBDS-201ENST00000246868 NESP48681 1621 aa32.69■■■□□ 2.82
SBDS-201ENST00000246868 PDS5BQ9NTI5 1447 aa32.55■■■□□ 2.8
SBDS-201ENST00000246868 CHIC1Q5VXU3 224 aa32.53■■■□□ 2.8
SBDS-201ENST00000246868 FANCD2Q9BXW9 1451 aa32.51■■■□□ 2.8
SBDS-201ENST00000246868 ABCC8Q09428 1581 aa32.45■■■□□ 2.79
SBDS-201ENST00000246868 CEP164Q9UPV0 1460 aa32.39■■■□□ 2.78
SBDS-201ENST00000246868 WRNQ14191 1432 aaPredicted RBP eCLIP32.38■■■□□ 2.77
SBDS-201ENST00000246868 TRIM41Q8WV44 630 aa32.35■■■□□ 2.77
SBDS-201ENST00000246868 KIF21AQ7Z4S6 1674 aa32.35■■■□□ 2.77
SBDS-201ENST00000246868 ERCC6Q03468 1493 aa32.28■■■□□ 2.76
SBDS-201ENST00000246868 SYNJ1O43426 1573 aa32.22■■■□□ 2.75
SBDS-201ENST00000246868 CUX1P39880 1505 aa32.2■■■□□ 2.74
SBDS-201ENST00000246868 TOP2BQ02880 1626 aa32.19■■■□□ 2.74
SBDS-201ENST00000246868 BIVM-ERCC5R4GMW8 1640 aa32.17■■■□□ 2.74
SBDS-201ENST00000246868 DNMBPQ6XZF7 1577 aa32.14■■■□□ 2.74
SBDS-201ENST00000246868 MRC2Q9UBG0 1479 aa32.12■■■□□ 2.73
SBDS-201ENST00000246868 URB2Q14146 1524 aaKnown RBP32.1■■■□□ 2.73
SBDS-201ENST00000246868 TOPBP1Q92547 1522 aa32.09■■■□□ 2.73
SBDS-201ENST00000246868 THOC2Q8NI27 1593 aaKnown RBP31.97■■■□□ 2.71
SBDS-201ENST00000246868 WDR62O43379 1518 aa31.97■■■□□ 2.71
SBDS-201ENST00000246868 FGD5Q6ZNL6 1462 aa31.95■■■□□ 2.71
SBDS-201ENST00000246868 POLA1P09884 1462 aaPredicted RBP31.88■■■□□ 2.69
SBDS-201ENST00000246868 SOGA1O94964 1423 aa31.79■■■□□ 2.68
SBDS-201ENST00000246868 RAD54L2Q9Y4B4 1467 aa31.73■■■□□ 2.67
SBDS-201ENST00000246868 EEA1Q15075 1411 aa31.7■■■□□ 2.66
SBDS-201ENST00000246868 ABCA10Q8WWZ4 1543 aa31.68■■■□□ 2.66
SBDS-201ENST00000246868 CUX2O14529 1486 aa31.68■■■□□ 2.66
SBDS-201ENST00000246868 FAM9AQ8IZU1 332 aaPredicted RBP31.67■■■□□ 2.66
SBDS-201ENST00000246868 IFT140Q96RY7 1462 aa31.66■■■□□ 2.66
SBDS-201ENST00000246868 KIF27Q86VH2 1401 aa31.65■■■□□ 2.66
SBDS-201ENST00000246868 TARBP1Q13395 1621 aaKnown RBP31.64■■■□□ 2.66
SBDS-201ENST00000246868 WDR97A6NE52 1622 aa31.61■■■□□ 2.65
SBDS-201ENST00000246868 RUSC2Q8N2Y8 1516 aa31.61■■■□□ 2.65
SBDS-201ENST00000246868 CSRNP3Q8WYN3 585 aa31.5■■■□□ 2.63
SBDS-201ENST00000246868 TDRD9Q8NDG6 1382 aaKnown RBP31.5■■■□□ 2.63
SBDS-201ENST00000246868 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
SBDS-201ENST00000246868 GAPVD1Q14C86 1478 aa31.44■■■□□ 2.62
SBDS-201ENST00000246868 ZNF608Q9ULD9 1512 aaPredicted RBP31.42■■■□□ 2.62
SBDS-201ENST00000246868 AQRO60306 1485 aaKnown RBP eCLIP31.38■■■□□ 2.617e-7■■□□□ 14.1
SBDS-201ENST00000246868 IGF1RP08069 1367 aa31.36■■■□□ 2.61
SBDS-201ENST00000246868 EIF4G3O43432 1585 aaKnown RBP31.35■■■□□ 2.61
SBDS-201ENST00000246868 ERICH3Q5RHP9 1530 aa31.34■■■□□ 2.61
SBDS-201ENST00000246868 PBRM1Q86U86 1689 aa31.3■■■□□ 2.6
SBDS-201ENST00000246868 GRIN2BQ13224 1484 aa31.3■■■□□ 2.6
SBDS-201ENST00000246868 KIF21BO75037 1637 aa31.26■■■□□ 2.59
SBDS-201ENST00000246868 CUL7Q14999 1698 aa31.25■■■□□ 2.59
SBDS-201ENST00000246868 PRXQ9BXM0 1461 aa31.25■■■□□ 2.59
SBDS-201ENST00000246868 CARMIL1Q5VZK9 1371 aa31.23■■■□□ 2.59
SBDS-201ENST00000246868 LOC105371045A0A1W2PR82 267 aa31.21■■■□□ 2.59
SBDS-201ENST00000246868 EHMT2Q96KQ7 1210 aa31.2■■■□□ 2.58
SBDS-201ENST00000246868 GOLGA3Q08378 1498 aa31.18■■■□□ 2.58
SBDS-201ENST00000246868 RAPGEF2Q9Y4G8 1499 aa31.14■■■□□ 2.58
SBDS-201ENST00000246868 SNAPC4Q5SXM2 1469 aa31.12■■■□□ 2.57
SBDS-201ENST00000246868 MAGI1Q96QZ7 1491 aaPredicted RBP31.12■■■□□ 2.57
SBDS-201ENST00000246868 FHAD1B1AJZ9 1412 aa31.11■■■□□ 2.57
SBDS-201ENST00000246868 ADAMTS12P58397 1594 aa31.1■■■□□ 2.57
SBDS-201ENST00000246868 UBTFP17480 764 aaKnown RBP31.07■■■□□ 2.56
SBDS-201ENST00000246868 SYNJ2O15056 1496 aa30.98■■■□□ 2.55
SBDS-201ENST00000246868 TNIKQ9UKE5 1360 aa30.96■■■□□ 2.55
SBDS-201ENST00000246868 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.54
SBDS-201ENST00000246868 FBLN2P98095 1184 aa30.9■■■□□ 2.54
SBDS-201ENST00000246868 GRIN2AQ12879 1464 aa30.89■■■□□ 2.53
SBDS-201ENST00000246868 CTTNBP2Q8WZ74 1663 aa30.8■■■□□ 2.52
SBDS-201ENST00000246868 CHD1O14646 1710 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms