RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 NISCHQ9Y2I1 1504 aa37.24■■■■□ 3.55
PDZD3-202ENST00000355547 CCDC180Q9P1Z9 1646 aa31.88■■■□□ 2.69
PDZD3-202ENST00000355547 SHROOM4Q9ULL8 1493 aa31.62■■■□□ 2.65
PDZD3-202ENST00000355547 ZCCHC6Q5VYS8 1495 aaKnown RBP31.55■■■□□ 2.64
PDZD3-202ENST00000355547 SUPT5HO00267 1087 aaKnown RBP31.12■■■□□ 2.57
PDZD3-202ENST00000355547 ABCC9O60706 1549 aa30.81■■■□□ 2.52
PDZD3-202ENST00000355547 DCAF1Q9Y4B6 1507 aa30.67■■■□□ 2.5
PDZD3-202ENST00000355547 DCAF8L2P0C7V8 631 aa30.54■■■□□ 2.48
PDZD3-202ENST00000355547 CHIC1Q5VXU3 224 aa30.5■■■□□ 2.47
PDZD3-202ENST00000355547 MYO15BQ96JP2 1530 aa30.37■■■□□ 2.45
PDZD3-202ENST00000355547 HRCP23327 699 aa29.85■■■□□ 2.37
PDZD3-202ENST00000355547 NACADO15069 1562 aa29.84■■■□□ 2.37
PDZD3-202ENST00000355547 RB1CC1Q8TDY2 1594 aa29.73■■■□□ 2.35
PDZD3-202ENST00000355547 PCGF6Q9BYE7 350 aa29.6■■■□□ 2.33
PDZD3-202ENST00000355547 RSF1Q96T23 1441 aaPredicted RBP29.52■■■□□ 2.32
PDZD3-202ENST00000355547 SCRIBQ14160 1630 aa29.5■■■□□ 2.31
PDZD3-202ENST00000355547 LOC105371045A0A1W2PR82 267 aa29.5■■■□□ 2.31
PDZD3-202ENST00000355547 UNC13AQ9UPW8 1703 aa29.2■■■□□ 2.26
PDZD3-202ENST00000355547 TRIM26Q12899 539 aaPredicted RBP29.13■■■□□ 2.25
PDZD3-202ENST00000355547 TRIM41Q8WV44 630 aa29.06■■■□□ 2.24
PDZD3-202ENST00000355547 PPARGC1BQ86YN6 1023 aaKnown RBP29.05■■■□□ 2.24
PDZD3-202ENST00000355547 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.23
PDZD3-202ENST00000355547 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
PDZD3-202ENST00000355547 BICRAQ9NZM4 1560 aa28.91■■■□□ 2.22
PDZD3-202ENST00000355547 MROH2BQ7Z745 1585 aa28.9■■■□□ 2.22
PDZD3-202ENST00000355547 WIZO95785 1651 aa28.72■■■□□ 2.19
PDZD3-202ENST00000355547 FAM9AQ8IZU1 332 aaPredicted RBP28.7■■■□□ 2.18
PDZD3-202ENST00000355547 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.18
PDZD3-202ENST00000355547 ZEB1P37275 1124 aaPredicted RBP28.63■■■□□ 2.17
PDZD3-202ENST00000355547 EIF4G1Q04637 1599 aaKnown RBP28.53■■■□□ 2.16
PDZD3-202ENST00000355547 TOP2AP11388 1531 aaKnown RBP28.36■■■□□ 2.13
PDZD3-202ENST00000355547 EHMT2Q96KQ7 1210 aa28.33■■■□□ 2.13
PDZD3-202ENST00000355547 SMARCA4P51532 1647 aa28.3■■■□□ 2.12
PDZD3-202ENST00000355547 PELP1Q8IZL8 1130 aaKnown RBP28.24■■■□□ 2.11
PDZD3-202ENST00000355547 CCDC88BA6NC98 1476 aa28.22■■■□□ 2.11
PDZD3-202ENST00000355547 SMARCA2P51531 1590 aa28.19■■■□□ 2.1
PDZD3-202ENST00000355547 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
PDZD3-202ENST00000355547 WRNQ14191 1432 aaPredicted RBP eCLIP28.04■■■□□ 2.08
PDZD3-202ENST00000355547 EEA1Q15075 1411 aa27.95■■■□□ 2.06
PDZD3-202ENST00000355547 SOGA1O94964 1423 aa27.92■■■□□ 2.06
PDZD3-202ENST00000355547 TNIKQ9UKE5 1360 aa27.92■■■□□ 2.06
PDZD3-202ENST00000355547 CEP162Q5TB80 1403 aa27.9■■■□□ 2.06
PDZD3-202ENST00000355547 PEG3Q9GZU2 1588 aa27.84■■■□□ 2.05
PDZD3-202ENST00000355547 CC2D2AQ9P2K1 1620 aa27.82■■■□□ 2.04
PDZD3-202ENST00000355547 CSRNP3Q8WYN3 585 aa27.82■■■□□ 2.04
PDZD3-202ENST00000355547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.81■■■□□ 2.04
PDZD3-202ENST00000355547 CCER1Q8TC90 406 aaPredicted RBP27.78■■■□□ 2.04
PDZD3-202ENST00000355547 DNAJC5BQ9UF47 199 aa27.76■■■□□ 2.03
PDZD3-202ENST00000355547 RUSC2Q8N2Y8 1516 aa27.76■■■□□ 2.03
PDZD3-202ENST00000355547 ATAD2BQ9ULI0 1458 aa27.75■■■□□ 2.03
PDZD3-202ENST00000355547 GOLGA3Q08378 1498 aa27.69■■■□□ 2.02
PDZD3-202ENST00000355547 UBTFP17480 764 aaKnown RBP27.62■■■□□ 2.01
PDZD3-202ENST00000355547 NCAPD3P42695 1498 aa27.57■■■□□ 2
PDZD3-202ENST00000355547 BAZ1BQ9UIG0 1483 aaKnown RBP27.56■■■□□ 2
PDZD3-202ENST00000355547 SCAF1Q9H7N4 1312 aaKnown RBP27.54■■■□□ 2
PDZD3-202ENST00000355547 SYNJ1O43426 1573 aa27.54■■■□□ 2
PDZD3-202ENST00000355547 CEP164Q9UPV0 1460 aa27.53■■■□□ 2
PDZD3-202ENST00000355547 KIF21BO75037 1637 aa27.52■■■□□ 2
PDZD3-202ENST00000355547 TTBK1Q5TCY1 1321 aaPredicted RBP27.49■■□□□ 1.99
PDZD3-202ENST00000355547 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
PDZD3-202ENST00000355547 DIEXFQ68CQ4 756 aaKnown RBP27.36■■□□□ 1.97
PDZD3-202ENST00000355547 CLIP1P30622 1438 aa27.35■■□□□ 1.97
PDZD3-202ENST00000355547 VPS8Q8N3P4 1428 aa27.29■■□□□ 1.96
PDZD3-202ENST00000355547 ACIN1Q9UKV3 1341 aaKnown RBP27.28■■□□□ 1.96
PDZD3-202ENST00000355547 MYT1Q01538 1121 aa27.26■■□□□ 1.95
PDZD3-202ENST00000355547 RAPGEF2Q9Y4G8 1499 aa27.25■■□□□ 1.95
PDZD3-202ENST00000355547 TOP2BQ02880 1626 aa27.24■■□□□ 1.95
PDZD3-202ENST00000355547 NEUROD1Q13562 356 aa27.18■■□□□ 1.94
PDZD3-202ENST00000355547 ZNF316A6NFI3 1004 aaPredicted RBP27.17■■□□□ 1.94
PDZD3-202ENST00000355547 BIVM-ERCC5R4GMW8 1640 aa27.15■■□□□ 1.94
PDZD3-202ENST00000355547 CENPBP07199 599 aaPredicted RBP27.1■■□□□ 1.93
PDZD3-202ENST00000355547 HNRNPUL2Q1KMD3 747 aaKnown RBP27.08■■□□□ 1.93
PDZD3-202ENST00000355547 APLP2Q06481 763 aa27.07■■□□□ 1.92
PDZD3-202ENST00000355547 ERICH3Q5RHP9 1530 aa27.07■■□□□ 1.92
PDZD3-202ENST00000355547 PRXQ9BXM0 1461 aa27.05■■□□□ 1.92
PDZD3-202ENST00000355547 ARAP1Q96P48 1450 aa26.91■■□□□ 1.9
PDZD3-202ENST00000355547 CUX1P39880 1505 aa26.91■■□□□ 1.9
PDZD3-202ENST00000355547 GTF3C3Q9Y5Q9 886 aa26.9■■□□□ 1.9
PDZD3-202ENST00000355547 NESP48681 1621 aa26.89■■□□□ 1.9
PDZD3-202ENST00000355547 CADPSQ9ULU8 1353 aa26.86■■□□□ 1.89
PDZD3-202ENST00000355547 RANGAP1P46060 587 aaPredicted RBP26.86■■□□□ 1.89
PDZD3-202ENST00000355547 CFTRP13569 1480 aa26.84■■□□□ 1.89
PDZD3-202ENST00000355547 KIF27Q86VH2 1401 aa26.84■■□□□ 1.89
PDZD3-202ENST00000355547 CLSPNQ9HAW4 1339 aa26.84■■□□□ 1.89
PDZD3-202ENST00000355547 MIER1Q8N108 512 aa26.74■■□□□ 1.87
PDZD3-202ENST00000355547 KANK4Q5T7N3 995 aaPredicted RBP26.73■■□□□ 1.87
PDZD3-202ENST00000355547 DHX57Q6P158 1386 aaKnown RBP26.72■■□□□ 1.87
PDZD3-202ENST00000355547 RRBP1Q9P2E9 1410 aaKnown RBP26.72■■□□□ 1.87
PDZD3-202ENST00000355547 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
PDZD3-202ENST00000355547 ARHGAP35Q9NRY4 1499 aa26.65■■□□□ 1.86
PDZD3-202ENST00000355547 CUX2O14529 1486 aa26.63■■□□□ 1.85
PDZD3-202ENST00000355547 PRDM2Q13029 1718 aa26.61■■□□□ 1.85
PDZD3-202ENST00000355547 YTHDC1Q96MU7 727 aaKnown RBP26.58■■□□□ 1.84
PDZD3-202ENST00000355547 FANCD2Q9BXW9 1451 aa26.57■■□□□ 1.84
PDZD3-202ENST00000355547 IGF1RP08069 1367 aa26.55■■□□□ 1.84
PDZD3-202ENST00000355547 CCNB3Q8WWL7 1395 aa26.54■■□□□ 1.84
PDZD3-202ENST00000355547 PDS5BQ9NTI5 1447 aa26.54■■□□□ 1.84
PDZD3-202ENST00000355547 KIF21AQ7Z4S6 1674 aa26.51■■□□□ 1.83
PDZD3-202ENST00000355547 MAP3K1Q13233 1512 aa26.49■■□□□ 1.83
PDZD3-202ENST00000355547 ERCC6Q03468 1493 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms