RNA–Protein interactions for RNA: ENST00000438268.2

ZCCHC9-204, Transcript of zinc finger CCHC-type containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZCCHC9, Length 1,248 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-204ENST00000438268 NISCHQ9Y2I1 1504 aa50.42■■■■■ 5.66
ZCCHC9-204ENST00000438268 CCDC180Q9P1Z9 1646 aa45■■■■■ 4.79
ZCCHC9-204ENST00000438268 ABCC9O60706 1549 aa44.18■■■■■ 4.66
ZCCHC9-204ENST00000438268 RB1CC1Q8TDY2 1594 aa42.43■■■■■ 4.38
ZCCHC9-204ENST00000438268 NACADO15069 1562 aa42.31■■■■■ 4.36
ZCCHC9-204ENST00000438268 DCAF8L2P0C7V8 631 aa42.19■■■■■ 4.34
ZCCHC9-204ENST00000438268 ZCCHC6Q5VYS8 1495 aaKnown RBP41.98■■■■■ 4.31
ZCCHC9-204ENST00000438268 MYO15BQ96JP2 1530 aa41.96■■■■■ 4.31
ZCCHC9-204ENST00000438268 DCAF1Q9Y4B6 1507 aa41.71■■■■■ 4.27
ZCCHC9-204ENST00000438268 UNC13AQ9UPW8 1703 aa41.5■■■■■ 4.23
ZCCHC9-204ENST00000438268 PABPN1Q86U42 306 aaKnown RBP eCLIP41.2■■■■■ 4.19
ZCCHC9-204ENST00000438268 BICRAQ9NZM4 1560 aa41.12■■■■■ 4.17
ZCCHC9-204ENST00000438268 SCRIBQ14160 1630 aa41.05■■■■■ 4.16
ZCCHC9-204ENST00000438268 SHROOM4Q9ULL8 1493 aa40.7■■■■■ 4.11
ZCCHC9-204ENST00000438268 DNAJC5BQ9UF47 199 aa40.63■■■■■ 4.09
ZCCHC9-204ENST00000438268 EIF4G1Q04637 1599 aaKnown RBP40.08■■■■■ 4.01
ZCCHC9-204ENST00000438268 CC2D2AQ9P2K1 1620 aa39.98■■■■□ 3.99
ZCCHC9-204ENST00000438268 CECR2Q9BXF3 1484 aa39.72■■■■□ 3.95
ZCCHC9-204ENST00000438268 SMARCA4P51532 1647 aa39.22■■■■□ 3.87
ZCCHC9-204ENST00000438268 BAZ1AQ9NRL2 1556 aaPredicted RBP39.13■■■■□ 3.85
ZCCHC9-204ENST00000438268 ATAD2BQ9ULI0 1458 aa39.01■■■■□ 3.84
ZCCHC9-204ENST00000438268 SMARCA2P51531 1590 aa38.99■■■■□ 3.83
ZCCHC9-204ENST00000438268 NCAPD3P42695 1498 aa38.99■■■■□ 3.83
ZCCHC9-204ENST00000438268 MROH2BQ7Z745 1585 aa38.86■■■■□ 3.81
ZCCHC9-204ENST00000438268 HMGXB3Q12766 1538 aa38.85■■■■□ 3.81
ZCCHC9-204ENST00000438268 PEG3Q9GZU2 1588 aa38.81■■■■□ 3.8
ZCCHC9-204ENST00000438268 BAZ1BQ9UIG0 1483 aaKnown RBP38.73■■■■□ 3.79
ZCCHC9-204ENST00000438268 WIZO95785 1651 aa38.46■■■■□ 3.75
ZCCHC9-204ENST00000438268 RSF1Q96T23 1441 aaPredicted RBP38.32■■■■□ 3.73
ZCCHC9-204ENST00000438268 NESP48681 1621 aa38.16■■■■□ 3.7
ZCCHC9-204ENST00000438268 ERCC6Q03468 1493 aa38.15■■■■□ 3.7
ZCCHC9-204ENST00000438268 LAMC3Q9Y6N6 1575 aa38.06■■■■□ 3.68
ZCCHC9-204ENST00000438268 TOP2AP11388 1531 aaKnown RBP38.05■■■■□ 3.68
ZCCHC9-204ENST00000438268 CADPSQ9ULU8 1353 aa37.85■■■■□ 3.65
ZCCHC9-204ENST00000438268 PDS5BQ9NTI5 1447 aa37.78■■■■□ 3.64
ZCCHC9-204ENST00000438268 CUX2O14529 1486 aa37.78■■■■□ 3.64
ZCCHC9-204ENST00000438268 KIF21AQ7Z4S6 1674 aa37.77■■■■□ 3.64
ZCCHC9-204ENST00000438268 THOC2Q8NI27 1593 aaKnown RBP37.68■■■■□ 3.62
ZCCHC9-204ENST00000438268 CFTRP13569 1480 aa37.6■■■■□ 3.61
ZCCHC9-204ENST00000438268 CCDC88BA6NC98 1476 aa37.55■■■■□ 3.6
ZCCHC9-204ENST00000438268 FANCD2Q9BXW9 1451 aa37.46■■■■□ 3.59
ZCCHC9-204ENST00000438268 CEP164Q9UPV0 1460 aa37.46■■■■□ 3.59
ZCCHC9-204ENST00000438268 MRC2Q9UBG0 1479 aa37.45■■■■□ 3.59
ZCCHC9-204ENST00000438268 PRDM2Q13029 1718 aa37.42■■■■□ 3.58
ZCCHC9-204ENST00000438268 WDR62O43379 1518 aa37.34■■■■□ 3.57
ZCCHC9-204ENST00000438268 SUPT5HO00267 1087 aaKnown RBP37.19■■■■□ 3.54
ZCCHC9-204ENST00000438268 URB2Q14146 1524 aaKnown RBP37.09■■■■□ 3.53
ZCCHC9-204ENST00000438268 TOPBP1Q92547 1522 aa36.84■■■■□ 3.49
ZCCHC9-204ENST00000438268 ABCC8Q09428 1581 aa36.81■■■■□ 3.48
ZCCHC9-204ENST00000438268 DNMBPQ6XZF7 1577 aa36.81■■■■□ 3.48
ZCCHC9-204ENST00000438268 DNAJC5Q9H3Z4 198 aa36.78■■■■□ 3.48
ZCCHC9-204ENST00000438268 IFT140Q96RY7 1462 aa36.66■■■■□ 3.46
ZCCHC9-204ENST00000438268 POLA1P09884 1462 aaPredicted RBP36.51■■■■□ 3.44
ZCCHC9-204ENST00000438268 ZNF608Q9ULD9 1512 aaPredicted RBP36.5■■■■□ 3.43
ZCCHC9-204ENST00000438268 CUX1P39880 1505 aa36.49■■■■□ 3.43
ZCCHC9-204ENST00000438268 TARBP1Q13395 1621 aaKnown RBP36.46■■■■□ 3.43
ZCCHC9-204ENST00000438268 EIF4G3O43432 1585 aaKnown RBP36.41■■■■□ 3.42
ZCCHC9-204ENST00000438268 FGD5Q6ZNL6 1462 aa36.4■■■■□ 3.42
ZCCHC9-204ENST00000438268 RAD54L2Q9Y4B4 1467 aa36.34■■■■□ 3.41
ZCCHC9-204ENST00000438268 SOGA1O94964 1423 aa36.33■■■■□ 3.41
ZCCHC9-204ENST00000438268 AQRO60306 1485 aaKnown RBP eCLIP36.25■■■■□ 3.39
ZCCHC9-204ENST00000438268 WDR97A6NE52 1622 aa36.19■■■■□ 3.38
ZCCHC9-204ENST00000438268 WRNQ14191 1432 aaPredicted RBP eCLIP36.17■■■■□ 3.38
ZCCHC9-204ENST00000438268 TDRD9Q8NDG6 1382 aaKnown RBP36.15■■■■□ 3.38
ZCCHC9-204ENST00000438268 BIVM-ERCC5R4GMW8 1640 aa36.14■■■■□ 3.38
ZCCHC9-204ENST00000438268 TOP2BQ02880 1626 aa36.13■■■■□ 3.37
ZCCHC9-204ENST00000438268 SYNJ1O43426 1573 aa36.12■■■■□ 3.37
ZCCHC9-204ENST00000438268 OSCARQ8IYS5 282 aa36.11■■■■□ 3.37
ZCCHC9-204ENST00000438268 ABCA10Q8WWZ4 1543 aa36.03■■■■□ 3.36
ZCCHC9-204ENST00000438268 CHD1O14646 1710 aa36.01■■■■□ 3.36
ZCCHC9-204ENST00000438268 GRIN2BQ13224 1484 aa35.96■■■■□ 3.35
ZCCHC9-204ENST00000438268 SNAPC4Q5SXM2 1469 aa35.96■■■■□ 3.35
ZCCHC9-204ENST00000438268 PBRM1Q86U86 1689 aa35.94■■■■□ 3.34
ZCCHC9-204ENST00000438268 ABCA5Q8WWZ7 1642 aa35.94■■■■□ 3.34
ZCCHC9-204ENST00000438268 GAPVD1Q14C86 1478 aa35.93■■■■□ 3.34
ZCCHC9-204ENST00000438268 MAGI1Q96QZ7 1491 aaPredicted RBP35.9■■■■□ 3.34
ZCCHC9-204ENST00000438268 FBLN2P98095 1184 aa35.87■■■■□ 3.33
ZCCHC9-204ENST00000438268 SYNJ2O15056 1496 aa35.76■■■■□ 3.32
ZCCHC9-204ENST00000438268 CHMP7Q8WUX9 453 aaPredicted RBP35.72■■■■□ 3.31
ZCCHC9-204ENST00000438268 RIMBP3CA6NJZ7 1639 aa35.64■■■■□ 3.3
ZCCHC9-204ENST00000438268 RIMBP3BA6NNM3 1639 aa35.64■■■■□ 3.3
ZCCHC9-204ENST00000438268 RIMBP3Q9UFD9 1639 aa35.64■■■■□ 3.3
ZCCHC9-204ENST00000438268 ADAMTS12P58397 1594 aa35.64■■■■□ 3.3
ZCCHC9-204ENST00000438268 ERICH3Q5RHP9 1530 aa35.61■■■■□ 3.29
ZCCHC9-204ENST00000438268 ARHGEF11O15085 1522 aa35.6■■■■□ 3.29
ZCCHC9-204ENST00000438268 CLASP1Q7Z460 1538 aa35.57■■■■□ 3.28
ZCCHC9-204ENST00000438268 TRIM41Q8WV44 630 aa35.55■■■■□ 3.28
ZCCHC9-204ENST00000438268 FHAD1B1AJZ9 1412 aa35.5■■■■□ 3.27
ZCCHC9-204ENST00000438268 GRIN2AQ12879 1464 aa35.5■■■■□ 3.27
ZCCHC9-204ENST00000438268 KIF27Q86VH2 1401 aa35.44■■■■□ 3.26
ZCCHC9-204ENST00000438268 CEP170Q5SW79 1584 aa35.34■■■■□ 3.25
ZCCHC9-204ENST00000438268 NUP160Q12769 1436 aa35.34■■■■□ 3.25
ZCCHC9-204ENST00000438268 ARAP1Q96P48 1450 aa35.29■■■■□ 3.24
ZCCHC9-204ENST00000438268 CUL7Q14999 1698 aa35.29■■■■□ 3.24
ZCCHC9-204ENST00000438268 IGF1RP08069 1367 aa35.25■■■■□ 3.23
ZCCHC9-204ENST00000438268 CYB5RLQ6IPT4 315 aa35.22■■■■□ 3.23
ZCCHC9-204ENST00000438268 SHROOM2Q13796 1616 aa35.13■■■■□ 3.21
ZCCHC9-204ENST00000438268 RUSC2Q8N2Y8 1516 aa35.11■■■■□ 3.21
ZCCHC9-204ENST00000438268 CARMIL1Q5VZK9 1371 aa35.07■■■■□ 3.2
ZCCHC9-204ENST00000438268 ERCC6L2Q5T890 1561 aa35.04■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms