RNA–Protein interactions for RNA: ENST00000204517.10

TFAP4-201, Transcript of transcription factor AP-4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-201ENST00000204517 NISCHQ9Y2I1 1504 aa41.59■■■■■ 4.25
TFAP4-201ENST00000204517 CCDC180Q9P1Z9 1646 aa36.21■■■■□ 3.39
TFAP4-201ENST00000204517 ZCCHC6Q5VYS8 1495 aaKnown RBP34.99■■■■□ 3.19
TFAP4-201ENST00000204517 DCAF1Q9Y4B6 1507 aa34.41■■■■□ 3.1
TFAP4-201ENST00000204517 DCAF8L2P0C7V8 631 aa34.27■■■■□ 3.08
TFAP4-201ENST00000204517 SHROOM4Q9ULL8 1493 aa34.06■■■■□ 3.04
TFAP4-201ENST00000204517 ABCC9O60706 1549 aa33.97■■■■□ 3.03
TFAP4-201ENST00000204517 MYO15BQ96JP2 1530 aa33.92■■■■□ 3.02
TFAP4-201ENST00000204517 NACADO15069 1562 aa33.65■■■□□ 2.98
TFAP4-201ENST00000204517 RB1CC1Q8TDY2 1594 aa33.32■■■□□ 2.92
TFAP4-201ENST00000204517 SCRIBQ14160 1630 aa33.3■■■□□ 2.92
TFAP4-201ENST00000204517 SUPT5HO00267 1087 aaKnown RBP32.9■■■□□ 2.86
TFAP4-201ENST00000204517 UNC13AQ9UPW8 1703 aa32.67■■■□□ 2.82
TFAP4-201ENST00000204517 RSF1Q96T23 1441 aaPredicted RBP32.33■■■□□ 2.77
TFAP4-201ENST00000204517 CECR2Q9BXF3 1484 aa32.26■■■□□ 2.76
TFAP4-201ENST00000204517 BICRAQ9NZM4 1560 aa32.26■■■□□ 2.75
TFAP4-201ENST00000204517 MROH2BQ7Z745 1585 aa32.12■■■□□ 2.73
TFAP4-201ENST00000204517 BAZ1AQ9NRL2 1556 aaPredicted RBP32.12■■■□□ 2.73
TFAP4-201ENST00000204517 PABPN1Q86U42 306 aaKnown RBP eCLIP32.06■■■□□ 2.72
TFAP4-201ENST00000204517 SMARCA4P51532 1647 aa31.94■■■□□ 2.7
TFAP4-201ENST00000204517 WIZO95785 1651 aa31.9■■■□□ 2.7
TFAP4-201ENST00000204517 CHIC1Q5VXU3 224 aa31.61■■■□□ 2.65
TFAP4-201ENST00000204517 TOP2AP11388 1531 aaKnown RBP31.59■■■□□ 2.65
TFAP4-201ENST00000204517 PEG3Q9GZU2 1588 aa31.53■■■□□ 2.64
TFAP4-201ENST00000204517 SMARCA2P51531 1590 aa31.37■■■□□ 2.61
TFAP4-201ENST00000204517 ATAD2BQ9ULI0 1458 aa31.33■■■□□ 2.61
TFAP4-201ENST00000204517 EIF4G1Q04637 1599 aaKnown RBP31.29■■■□□ 2.6
TFAP4-201ENST00000204517 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
TFAP4-201ENST00000204517 BAZ1BQ9UIG0 1483 aaKnown RBP31.2■■■□□ 2.58
TFAP4-201ENST00000204517 HMGXB3Q12766 1538 aa31.03■■■□□ 2.56
TFAP4-201ENST00000204517 NCAPD3P42695 1498 aa31.02■■■□□ 2.56
TFAP4-201ENST00000204517 TRIM41Q8WV44 630 aa30.95■■■□□ 2.55
TFAP4-201ENST00000204517 CC2D2AQ9P2K1 1620 aa30.78■■■□□ 2.52
TFAP4-201ENST00000204517 ABCC8Q09428 1581 aa30.66■■■□□ 2.5
TFAP4-201ENST00000204517 WRNQ14191 1432 aaPredicted RBP eCLIP30.46■■■□□ 2.47
TFAP4-201ENST00000204517 CFTRP13569 1480 aa30.4■■■□□ 2.46
TFAP4-201ENST00000204517 LOC105371045A0A1W2PR82 267 aa30.39■■■□□ 2.46
TFAP4-201ENST00000204517 PRDM2Q13029 1718 aa30.36■■■□□ 2.45
TFAP4-201ENST00000204517 FAM9AQ8IZU1 332 aaPredicted RBP30.36■■■□□ 2.45
TFAP4-201ENST00000204517 SYNJ1O43426 1573 aa30.31■■■□□ 2.44
TFAP4-201ENST00000204517 CADPSQ9ULU8 1353 aa30.25■■■□□ 2.43
TFAP4-201ENST00000204517 TOP2BQ02880 1626 aa30.2■■■□□ 2.43
TFAP4-201ENST00000204517 EEA1Q15075 1411 aa30.18■■■□□ 2.42
TFAP4-201ENST00000204517 BIVM-ERCC5R4GMW8 1640 aa30.18■■■□□ 2.42
TFAP4-201ENST00000204517 SOGA1O94964 1423 aa30.12■■■□□ 2.41
TFAP4-201ENST00000204517 CUX1P39880 1505 aa30.02■■■□□ 2.4
TFAP4-201ENST00000204517 RUSC2Q8N2Y8 1516 aa29.98■■■□□ 2.39
TFAP4-201ENST00000204517 LAMC3Q9Y6N6 1575 aa29.98■■■□□ 2.39
TFAP4-201ENST00000204517 CSRNP3Q8WYN3 585 aa29.95■■■□□ 2.38
TFAP4-201ENST00000204517 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
TFAP4-201ENST00000204517 EHMT2Q96KQ7 1210 aa29.91■■■□□ 2.38
TFAP4-201ENST00000204517 NESP48681 1621 aa29.88■■■□□ 2.37
TFAP4-201ENST00000204517 DNAJC5BQ9UF47 199 aa29.8■■■□□ 2.36
TFAP4-201ENST00000204517 KIF21BO75037 1637 aa29.77■■■□□ 2.36
TFAP4-201ENST00000204517 GOLGA3Q08378 1498 aa29.76■■■□□ 2.36
TFAP4-201ENST00000204517 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
TFAP4-201ENST00000204517 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
TFAP4-201ENST00000204517 PDS5BQ9NTI5 1447 aa29.72■■■□□ 2.35
TFAP4-201ENST00000204517 TNIKQ9UKE5 1360 aa29.69■■■□□ 2.34
TFAP4-201ENST00000204517 KIF27Q86VH2 1401 aa29.68■■■□□ 2.34
TFAP4-201ENST00000204517 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
TFAP4-201ENST00000204517 TOPBP1Q92547 1522 aa29.63■■■□□ 2.33
TFAP4-201ENST00000204517 UBTFP17480 764 aaKnown RBP29.61■■■□□ 2.33
TFAP4-201ENST00000204517 KIF21AQ7Z4S6 1674 aa29.59■■■□□ 2.33
TFAP4-201ENST00000204517 CEP162Q5TB80 1403 aa29.54■■■□□ 2.32
TFAP4-201ENST00000204517 CUX2O14529 1486 aa29.53■■■□□ 2.32
TFAP4-201ENST00000204517 ERICH3Q5RHP9 1530 aa29.53■■■□□ 2.32
TFAP4-201ENST00000204517 URB2Q14146 1524 aaKnown RBP29.52■■■□□ 2.32
TFAP4-201ENST00000204517 PRXQ9BXM0 1461 aa29.51■■■□□ 2.31
TFAP4-201ENST00000204517 RAPGEF2Q9Y4G8 1499 aa29.51■■■□□ 2.31
TFAP4-201ENST00000204517 POLA1P09884 1462 aaPredicted RBP29.5■■■□□ 2.31
TFAP4-201ENST00000204517 ABCA10Q8WWZ4 1543 aa29.43■■■□□ 2.3
TFAP4-201ENST00000204517 RAD54L2Q9Y4B4 1467 aa29.38■■■□□ 2.29
TFAP4-201ENST00000204517 IGF1RP08069 1367 aa29.34■■■□□ 2.29
TFAP4-201ENST00000204517 WDR97A6NE52 1622 aa29.33■■■□□ 2.29
TFAP4-201ENST00000204517 MRC2Q9UBG0 1479 aa29.32■■■□□ 2.28
TFAP4-201ENST00000204517 PCGF6Q9BYE7 350 aa29.28■■■□□ 2.28
TFAP4-201ENST00000204517 CLIP1P30622 1438 aa29.27■■■□□ 2.28
TFAP4-201ENST00000204517 TRIM26Q12899 539 aaPredicted RBP29.25■■■□□ 2.27
TFAP4-201ENST00000204517 CARMIL1Q5VZK9 1371 aa29.23■■■□□ 2.27
TFAP4-201ENST00000204517 CUL7Q14999 1698 aa29.19■■■□□ 2.26
TFAP4-201ENST00000204517 ABCA5Q8WWZ7 1642 aa29.18■■■□□ 2.26
TFAP4-201ENST00000204517 TARBP1Q13395 1621 aaKnown RBP29.17■■■□□ 2.26
TFAP4-201ENST00000204517 WDR62O43379 1518 aa29.16■■■□□ 2.26
TFAP4-201ENST00000204517 ERCC6Q03468 1493 aa29.15■■■□□ 2.26
TFAP4-201ENST00000204517 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
TFAP4-201ENST00000204517 TDRD9Q8NDG6 1382 aaKnown RBP29.08■■■□□ 2.25
TFAP4-201ENST00000204517 VPS8Q8N3P4 1428 aa29.06■■■□□ 2.24
TFAP4-201ENST00000204517 RANGAP1P46060 587 aaPredicted RBP29.02■■■□□ 2.24
TFAP4-201ENST00000204517 THOC2Q8NI27 1593 aaKnown RBP29.01■■■□□ 2.23
TFAP4-201ENST00000204517 IFT140Q96RY7 1462 aa29.01■■■□□ 2.23
TFAP4-201ENST00000204517 PBRM1Q86U86 1689 aa28.97■■■□□ 2.23
TFAP4-201ENST00000204517 PPARGC1BQ86YN6 1023 aaKnown RBP28.94■■■□□ 2.22
TFAP4-201ENST00000204517 ARAP1Q96P48 1450 aa28.94■■■□□ 2.22
TFAP4-201ENST00000204517 CTTNBP2Q8WZ74 1663 aa28.91■■■□□ 2.22
TFAP4-201ENST00000204517 ARHGAP35Q9NRY4 1499 aa28.89■■■□□ 2.22
TFAP4-201ENST00000204517 AQRO60306 1485 aaKnown RBP eCLIP28.85■■■□□ 2.213e-6■■■■□ 19.6
TFAP4-201ENST00000204517 GRIN2BQ13224 1484 aa28.84■■■□□ 2.21
TFAP4-201ENST00000204517 APLP2Q06481 763 aa28.82■■■□□ 2.2
TFAP4-201ENST00000204517 FHAD1B1AJZ9 1412 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms