RNA–Protein interactions for RNA: ENST00000513881.5

SNX24-211, Transcript of sorting nexin 24, humanhuman

TSL 1 (best) BASIC

Gene SNX24, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX24-211ENST00000513881 NISCHQ9Y2I1 1504 aa50.89■■■■■ 5.74
SNX24-211ENST00000513881 CCDC180Q9P1Z9 1646 aa45.29■■■■■ 4.84
SNX24-211ENST00000513881 ABCC9O60706 1549 aa44.49■■■■■ 4.71
SNX24-211ENST00000513881 RB1CC1Q8TDY2 1594 aa42.66■■■■■ 4.42
SNX24-211ENST00000513881 NACADO15069 1562 aa42.58■■■■■ 4.41
SNX24-211ENST00000513881 DCAF8L2P0C7V8 631 aa42.46■■■■■ 4.39
SNX24-211ENST00000513881 ZCCHC6Q5VYS8 1495 aaKnown RBP42.38■■■■■ 4.38
SNX24-211ENST00000513881 MYO15BQ96JP2 1530 aa42.29■■■■■ 4.36
SNX24-211ENST00000513881 DCAF1Q9Y4B6 1507 aa42.06■■■■■ 4.32
SNX24-211ENST00000513881 UNC13AQ9UPW8 1703 aa41.88■■■■■ 4.29
SNX24-211ENST00000513881 PABPN1Q86U42 306 aaKnown RBP eCLIP41.54■■■■■ 4.24
SNX24-211ENST00000513881 BICRAQ9NZM4 1560 aa41.53■■■■■ 4.24
SNX24-211ENST00000513881 SCRIBQ14160 1630 aa41.36■■■■■ 4.21
SNX24-211ENST00000513881 DNAJC5BQ9UF47 199 aa41.07■■■■■ 4.16
SNX24-211ENST00000513881 SHROOM4Q9ULL8 1493 aa40.89■■■■■ 4.14
SNX24-211ENST00000513881 EIF4G1Q04637 1599 aaKnown RBP40.38■■■■■ 4.05
SNX24-211ENST00000513881 CC2D2AQ9P2K1 1620 aa40.26■■■■■ 4.03
SNX24-211ENST00000513881 CECR2Q9BXF3 1484 aa39.96■■■■□ 3.99
SNX24-211ENST00000513881 SMARCA4P51532 1647 aa39.54■■■■□ 3.92
SNX24-211ENST00000513881 BAZ1AQ9NRL2 1556 aaPredicted RBP39.41■■■■□ 3.9
SNX24-211ENST00000513881 ATAD2BQ9ULI0 1458 aa39.35■■■■□ 3.89
SNX24-211ENST00000513881 NCAPD3P42695 1498 aa39.32■■■■□ 3.88
SNX24-211ENST00000513881 MROH2BQ7Z745 1585 aa39.27■■■■□ 3.88
SNX24-211ENST00000513881 SMARCA2P51531 1590 aa39.22■■■■□ 3.87
SNX24-211ENST00000513881 PEG3Q9GZU2 1588 aa39.16■■■■□ 3.86
SNX24-211ENST00000513881 HMGXB3Q12766 1538 aa39.11■■■■□ 3.85
SNX24-211ENST00000513881 BAZ1BQ9UIG0 1483 aaKnown RBP38.96■■■■□ 3.83
SNX24-211ENST00000513881 WIZO95785 1651 aa38.85■■■■□ 3.81
SNX24-211ENST00000513881 RSF1Q96T23 1441 aaPredicted RBP38.73■■■■□ 3.79
SNX24-211ENST00000513881 NESP48681 1621 aa38.52■■■■□ 3.76
SNX24-211ENST00000513881 TOP2AP11388 1531 aaKnown RBP38.36■■■■□ 3.73
SNX24-211ENST00000513881 LAMC3Q9Y6N6 1575 aa38.3■■■■□ 3.72
SNX24-211ENST00000513881 ERCC6Q03468 1493 aa38.26■■■■□ 3.71
SNX24-211ENST00000513881 CADPSQ9ULU8 1353 aa38.14■■■■□ 3.7
SNX24-211ENST00000513881 KIF21AQ7Z4S6 1674 aa38.06■■■■□ 3.68
SNX24-211ENST00000513881 PDS5BQ9NTI5 1447 aa37.97■■■■□ 3.67
SNX24-211ENST00000513881 THOC2Q8NI27 1593 aaKnown RBP37.96■■■■□ 3.67
SNX24-211ENST00000513881 CCDC88BA6NC98 1476 aa37.93■■■■□ 3.66
SNX24-211ENST00000513881 CUX2O14529 1486 aa37.93■■■■□ 3.66
SNX24-211ENST00000513881 CFTRP13569 1480 aa37.93■■■■□ 3.66
SNX24-211ENST00000513881 FANCD2Q9BXW9 1451 aa37.72■■■■□ 3.63
SNX24-211ENST00000513881 CEP164Q9UPV0 1460 aa37.67■■■■□ 3.62
SNX24-211ENST00000513881 MRC2Q9UBG0 1479 aa37.65■■■■□ 3.62
SNX24-211ENST00000513881 PRDM2Q13029 1718 aa37.65■■■■□ 3.62
SNX24-211ENST00000513881 WDR62O43379 1518 aa37.6■■■■□ 3.61
SNX24-211ENST00000513881 SUPT5HO00267 1087 aaKnown RBP37.54■■■■□ 3.6
SNX24-211ENST00000513881 URB2Q14146 1524 aaKnown RBP37.43■■■■□ 3.58
SNX24-211ENST00000513881 TOPBP1Q92547 1522 aa37.13■■■■□ 3.53
SNX24-211ENST00000513881 DNMBPQ6XZF7 1577 aa37.06■■■■□ 3.52
SNX24-211ENST00000513881 ABCC8Q09428 1581 aa36.99■■■■□ 3.51
SNX24-211ENST00000513881 DNAJC5Q9H3Z4 198 aa36.97■■■■□ 3.51
SNX24-211ENST00000513881 IFT140Q96RY7 1462 aa36.88■■■■□ 3.49
SNX24-211ENST00000513881 CUX1P39880 1505 aa36.84■■■■□ 3.49
SNX24-211ENST00000513881 ZNF608Q9ULD9 1512 aaPredicted RBP36.84■■■■□ 3.49
SNX24-211ENST00000513881 POLA1P09884 1462 aaPredicted RBP36.81■■■■□ 3.48
SNX24-211ENST00000513881 TARBP1Q13395 1621 aaKnown RBP36.8■■■■□ 3.48
SNX24-211ENST00000513881 FGD5Q6ZNL6 1462 aa36.7■■■■□ 3.47
SNX24-211ENST00000513881 RAD54L2Q9Y4B4 1467 aa36.68■■■■□ 3.46
SNX24-211ENST00000513881 EIF4G3O43432 1585 aaKnown RBP36.67■■■■□ 3.46
SNX24-211ENST00000513881 SOGA1O94964 1423 aa36.59■■■■□ 3.45
SNX24-211ENST00000513881 AQRO60306 1485 aaKnown RBP eCLIP36.57■■■■□ 3.44
SNX24-211ENST00000513881 SYNJ1O43426 1573 aa36.5■■■■□ 3.43
SNX24-211ENST00000513881 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
SNX24-211ENST00000513881 BIVM-ERCC5R4GMW8 1640 aa36.46■■■■□ 3.43
SNX24-211ENST00000513881 WRNQ14191 1432 aaPredicted RBP eCLIP36.46■■■■□ 3.43
SNX24-211ENST00000513881 TDRD9Q8NDG6 1382 aaKnown RBP36.45■■■■□ 3.43
SNX24-211ENST00000513881 TOP2BQ02880 1626 aa36.45■■■■□ 3.42
SNX24-211ENST00000513881 ABCA10Q8WWZ4 1543 aa36.32■■■■□ 3.4
SNX24-211ENST00000513881 OSCARQ8IYS5 282 aa36.28■■■■□ 3.4
SNX24-211ENST00000513881 CHD1O14646 1710 aa36.25■■■■□ 3.39
SNX24-211ENST00000513881 ABCA5Q8WWZ7 1642 aa36.24■■■■□ 3.39
SNX24-211ENST00000513881 SNAPC4Q5SXM2 1469 aa36.21■■■■□ 3.39
SNX24-211ENST00000513881 PBRM1Q86U86 1689 aa36.19■■■■□ 3.38
SNX24-211ENST00000513881 GRIN2BQ13224 1484 aa36.18■■■■□ 3.38
SNX24-211ENST00000513881 GAPVD1Q14C86 1478 aa36.18■■■■□ 3.38
SNX24-211ENST00000513881 MAGI1Q96QZ7 1491 aaPredicted RBP36.11■■■■□ 3.37
SNX24-211ENST00000513881 FBLN2P98095 1184 aa36.04■■■■□ 3.36
SNX24-211ENST00000513881 SYNJ2O15056 1496 aa35.99■■■■□ 3.35
SNX24-211ENST00000513881 CHMP7Q8WUX9 453 aaPredicted RBP35.9■■■■□ 3.34
SNX24-211ENST00000513881 ADAMTS12P58397 1594 aa35.89■■■■□ 3.34
SNX24-211ENST00000513881 RIMBP3CA6NJZ7 1639 aa35.87■■■■□ 3.33
SNX24-211ENST00000513881 RIMBP3BA6NNM3 1639 aa35.87■■■■□ 3.33
SNX24-211ENST00000513881 RIMBP3Q9UFD9 1639 aa35.87■■■■□ 3.33
SNX24-211ENST00000513881 ERICH3Q5RHP9 1530 aa35.86■■■■□ 3.33
SNX24-211ENST00000513881 CLASP1Q7Z460 1538 aa35.84■■■■□ 3.33
SNX24-211ENST00000513881 ARHGEF11O15085 1522 aa35.82■■■■□ 3.32
SNX24-211ENST00000513881 GRIN2AQ12879 1464 aa35.76■■■■□ 3.32
SNX24-211ENST00000513881 FHAD1B1AJZ9 1412 aa35.74■■■■□ 3.31
SNX24-211ENST00000513881 KIF27Q86VH2 1401 aa35.67■■■■□ 3.3
SNX24-211ENST00000513881 TRIM41Q8WV44 630 aa35.66■■■■□ 3.3
SNX24-211ENST00000513881 CEP170Q5SW79 1584 aa35.66■■■■□ 3.3
SNX24-211ENST00000513881 NUP160Q12769 1436 aa35.62■■■■□ 3.29
SNX24-211ENST00000513881 IGF1RP08069 1367 aa35.61■■■■□ 3.29
SNX24-211ENST00000513881 ARAP1Q96P48 1450 aa35.55■■■■□ 3.28
SNX24-211ENST00000513881 CUL7Q14999 1698 aa35.5■■■■□ 3.27
SNX24-211ENST00000513881 RUSC2Q8N2Y8 1516 aa35.47■■■■□ 3.27
SNX24-211ENST00000513881 CYB5RLQ6IPT4 315 aa35.42■■■■□ 3.26
SNX24-211ENST00000513881 SHROOM2Q13796 1616 aa35.42■■■■□ 3.26
SNX24-211ENST00000513881 ERCC6L2Q5T890 1561 aa35.41■■■■□ 3.26
SNX24-211ENST00000513881 CARMIL1Q5VZK9 1371 aa35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms