RNA–Protein interactions for RNA: ENST00000253008.2

PRDM12-201, Transcript of PR/SET domain 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM12, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM12-201ENST00000253008 NISCHQ9Y2I1 1504 aa37.8■■■■□ 3.64
PRDM12-201ENST00000253008 SHROOM4Q9ULL8 1493 aa32.6■■■□□ 2.81
PRDM12-201ENST00000253008 CCDC180Q9P1Z9 1646 aa32■■■□□ 2.71
PRDM12-201ENST00000253008 ZCCHC6Q5VYS8 1495 aaKnown RBP31.96■■■□□ 2.71
PRDM12-201ENST00000253008 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.71
PRDM12-201ENST00000253008 DCAF8L2P0C7V8 631 aa31.66■■■□□ 2.66
PRDM12-201ENST00000253008 CHIC1Q5VXU3 224 aa30.99■■■□□ 2.55
PRDM12-201ENST00000253008 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.54
PRDM12-201ENST00000253008 DCAF1Q9Y4B6 1507 aa30.84■■■□□ 2.53
PRDM12-201ENST00000253008 LOC105371045A0A1W2PR82 267 aa30.23■■■□□ 2.43
PRDM12-201ENST00000253008 SCRIBQ14160 1630 aa30.21■■■□□ 2.43
PRDM12-201ENST00000253008 PCGF6Q9BYE7 350 aa30.15■■■□□ 2.42
PRDM12-201ENST00000253008 ABCC9O60706 1549 aa30.14■■■□□ 2.42
PRDM12-201ENST00000253008 HRCP23327 699 aa30.06■■■□□ 2.4
PRDM12-201ENST00000253008 RSF1Q96T23 1441 aaPredicted RBP30.02■■■□□ 2.4
PRDM12-201ENST00000253008 RB1CC1Q8TDY2 1594 aa29.73■■■□□ 2.35
PRDM12-201ENST00000253008 NACADO15069 1562 aa29.69■■■□□ 2.34
PRDM12-201ENST00000253008 PPARGC1BQ86YN6 1023 aaKnown RBP29.68■■■□□ 2.34
PRDM12-201ENST00000253008 CECR2Q9BXF3 1484 aa29.66■■■□□ 2.34
PRDM12-201ENST00000253008 TRIM41Q8WV44 630 aa29.63■■■□□ 2.33
PRDM12-201ENST00000253008 FAM9AQ8IZU1 332 aaPredicted RBP29.58■■■□□ 2.33
PRDM12-201ENST00000253008 MROH2BQ7Z745 1585 aa29.5■■■□□ 2.31
PRDM12-201ENST00000253008 EHMT2Q96KQ7 1210 aa29.47■■■□□ 2.31
PRDM12-201ENST00000253008 TRIM26Q12899 539 aaPredicted RBP29.4■■■□□ 2.3
PRDM12-201ENST00000253008 WIZO95785 1651 aa29.33■■■□□ 2.29
PRDM12-201ENST00000253008 BAZ1AQ9NRL2 1556 aaPredicted RBP29■■■□□ 2.23
PRDM12-201ENST00000253008 UNC13AQ9UPW8 1703 aa28.98■■■□□ 2.23
PRDM12-201ENST00000253008 EIF4G1Q04637 1599 aaKnown RBP28.85■■■□□ 2.21
PRDM12-201ENST00000253008 SMARCA4P51532 1647 aa28.76■■■□□ 2.19
PRDM12-201ENST00000253008 ABCC8Q09428 1581 aa28.76■■■□□ 2.19
PRDM12-201ENST00000253008 CCDC88BA6NC98 1476 aa28.75■■■□□ 2.19
PRDM12-201ENST00000253008 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
PRDM12-201ENST00000253008 PABPN1Q86U42 306 aaKnown RBP eCLIP28.72■■■□□ 2.19
PRDM12-201ENST00000253008 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
PRDM12-201ENST00000253008 ZEB1P37275 1124 aaPredicted RBP28.61■■■□□ 2.17
PRDM12-201ENST00000253008 BICRAQ9NZM4 1560 aa28.57■■■□□ 2.16
PRDM12-201ENST00000253008 SOGA1O94964 1423 aa28.52■■■□□ 2.16
PRDM12-201ENST00000253008 TTBK1Q5TCY1 1321 aaPredicted RBP28.49■■■□□ 2.15
PRDM12-201ENST00000253008 RUSC2Q8N2Y8 1516 aa28.42■■■□□ 2.14
PRDM12-201ENST00000253008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.41■■■□□ 2.14
PRDM12-201ENST00000253008 CEP162Q5TB80 1403 aa28.32■■■□□ 2.12
PRDM12-201ENST00000253008 CSRNP3Q8WYN3 585 aa28.29■■■□□ 2.12
PRDM12-201ENST00000253008 UBTFP17480 764 aaKnown RBP28.25■■■□□ 2.11
PRDM12-201ENST00000253008 CCER1Q8TC90 406 aaPredicted RBP28.22■■■□□ 2.11
PRDM12-201ENST00000253008 TNIKQ9UKE5 1360 aa28.2■■■□□ 2.11
PRDM12-201ENST00000253008 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
PRDM12-201ENST00000253008 PEG3Q9GZU2 1588 aa28.11■■■□□ 2.09
PRDM12-201ENST00000253008 EEA1Q15075 1411 aa28.08■■■□□ 2.09
PRDM12-201ENST00000253008 ATAD2BQ9ULI0 1458 aa28.07■■■□□ 2.08
PRDM12-201ENST00000253008 SYNJ1O43426 1573 aa28.05■■■□□ 2.08
PRDM12-201ENST00000253008 GOLGA3Q08378 1498 aa28.01■■■□□ 2.07
PRDM12-201ENST00000253008 BAZ1BQ9UIG0 1483 aaKnown RBP27.97■■■□□ 2.07
PRDM12-201ENST00000253008 RANGAP1P46060 587 aaPredicted RBP27.88■■■□□ 2.05
PRDM12-201ENST00000253008 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.05
PRDM12-201ENST00000253008 SCAF1Q9H7N4 1312 aaKnown RBP27.81■■■□□ 2.04
PRDM12-201ENST00000253008 RAPGEF2Q9Y4G8 1499 aa27.78■■■□□ 2.04
PRDM12-201ENST00000253008 CLIP1P30622 1438 aa27.77■■■□□ 2.04
PRDM12-201ENST00000253008 KIF21BO75037 1637 aa27.74■■■□□ 2.03
PRDM12-201ENST00000253008 HNRNPUL2Q1KMD3 747 aaKnown RBP27.73■■■□□ 2.03
PRDM12-201ENST00000253008 DIEXFQ68CQ4 756 aaKnown RBP27.67■■■□□ 2.02
PRDM12-201ENST00000253008 VPS8Q8N3P4 1428 aa27.6■■■□□ 2.01
PRDM12-201ENST00000253008 TOP2BQ02880 1626 aa27.59■■■□□ 2.01
PRDM12-201ENST00000253008 NEUROD1Q13562 356 aa27.52■■■□□ 2
PRDM12-201ENST00000253008 APLP2Q06481 763 aa27.5■■□□□ 1.99
PRDM12-201ENST00000253008 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.98
PRDM12-201ENST00000253008 NCAPD3P42695 1498 aa27.45■■□□□ 1.98
PRDM12-201ENST00000253008 ACIN1Q9UKV3 1341 aaKnown RBP27.44■■□□□ 1.98
PRDM12-201ENST00000253008 CUX1P39880 1505 aa27.43■■□□□ 1.98
PRDM12-201ENST00000253008 HMGXB3Q12766 1538 aa27.42■■□□□ 1.98
PRDM12-201ENST00000253008 ZNF316A6NFI3 1004 aaPredicted RBP27.42■■□□□ 1.98
PRDM12-201ENST00000253008 PRXQ9BXM0 1461 aa27.39■■□□□ 1.98
PRDM12-201ENST00000253008 KANK4Q5T7N3 995 aaPredicted RBP27.34■■□□□ 1.97
PRDM12-201ENST00000253008 ARAP1Q96P48 1450 aa27.33■■□□□ 1.97
PRDM12-201ENST00000253008 ERICH3Q5RHP9 1530 aa27.28■■□□□ 1.96
PRDM12-201ENST00000253008 CFTRP13569 1480 aa27.27■■□□□ 1.96
PRDM12-201ENST00000253008 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
PRDM12-201ENST00000253008 GTF3C3Q9Y5Q9 886 aa27.2■■□□□ 1.94
PRDM12-201ENST00000253008 YTHDC1Q96MU7 727 aaKnown RBP27.16■■□□□ 1.94
PRDM12-201ENST00000253008 CENPBP07199 599 aaPredicted RBP27.16■■□□□ 1.94
PRDM12-201ENST00000253008 MIER1Q8N108 512 aa27.16■■□□□ 1.94
PRDM12-201ENST00000253008 CC2D2AQ9P2K1 1620 aa27.15■■□□□ 1.94
PRDM12-201ENST00000253008 ARHGAP35Q9NRY4 1499 aa27.09■■□□□ 1.93
PRDM12-201ENST00000253008 DHX57Q6P158 1386 aaKnown RBP27.06■■□□□ 1.92
PRDM12-201ENST00000253008 CUX2O14529 1486 aa27.06■■□□□ 1.92
PRDM12-201ENST00000253008 IGF1RP08069 1367 aa27.04■■□□□ 1.92
PRDM12-201ENST00000253008 ITGAEP38570 1179 aa27.02■■□□□ 1.92
PRDM12-201ENST00000253008 PELP1Q8IZL8 1130 aaKnown RBP27■■□□□ 1.91
PRDM12-201ENST00000253008 CADPSQ9ULU8 1353 aa26.99■■□□□ 1.91
PRDM12-201ENST00000253008 RRBP1Q9P2E9 1410 aaKnown RBP26.95■■□□□ 1.91
PRDM12-201ENST00000253008 FGD5Q6ZNL6 1462 aa26.93■■□□□ 1.9
PRDM12-201ENST00000253008 PRDM2Q13029 1718 aa26.92■■□□□ 1.9
PRDM12-201ENST00000253008 CARMIL1Q5VZK9 1371 aa26.9■■□□□ 1.9
PRDM12-201ENST00000253008 CCNB3Q8WWL7 1395 aa26.9■■□□□ 1.9
PRDM12-201ENST00000253008 P3H3Q8IVL6 736 aa26.87■■□□□ 1.89
PRDM12-201ENST00000253008 CLSPNQ9HAW4 1339 aa26.83■■□□□ 1.89
PRDM12-201ENST00000253008 DNAJC5BQ9UF47 199 aa26.76■■□□□ 1.87
PRDM12-201ENST00000253008 ATP1B4Q9UN42 357 aaPredicted RBP26.75■■□□□ 1.87
PRDM12-201ENST00000253008 FANCD2Q9BXW9 1451 aa26.75■■□□□ 1.87
PRDM12-201ENST00000253008 RAD54L2Q9Y4B4 1467 aa26.75■■□□□ 1.87
PRDM12-201ENST00000253008 TIAM1Q13009 1591 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms