RNA–Protein interactions for RNA: ENST00000296946.6

T-201, Transcript of Brachyury protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene T, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-201ENST00000296946 NISCHQ9Y2I1 1504 aa39.29■■■■□ 3.88
T-201ENST00000296946 CCDC180Q9P1Z9 1646 aa34.22■■■■□ 3.07
T-201ENST00000296946 ABCC9O60706 1549 aa32.94■■■□□ 2.86
T-201ENST00000296946 ZCCHC6Q5VYS8 1495 aaKnown RBP32.92■■■□□ 2.86
T-201ENST00000296946 DCAF8L2P0C7V8 631 aa32.77■■■□□ 2.84
T-201ENST00000296946 DCAF1Q9Y4B6 1507 aa32.35■■■□□ 2.77
T-201ENST00000296946 SHROOM4Q9ULL8 1493 aa32.06■■■□□ 2.72
T-201ENST00000296946 MYO15BQ96JP2 1530 aa32.06■■■□□ 2.72
T-201ENST00000296946 NACADO15069 1562 aa32.01■■■□□ 2.72
T-201ENST00000296946 RB1CC1Q8TDY2 1594 aa31.82■■■□□ 2.69
T-201ENST00000296946 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
T-201ENST00000296946 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
T-201ENST00000296946 PABPN1Q86U42 306 aaKnown RBP eCLIP31.1■■■□□ 2.57
T-201ENST00000296946 BICRAQ9NZM4 1560 aa30.99■■■□□ 2.55
T-201ENST00000296946 CECR2Q9BXF3 1484 aa30.69■■■□□ 2.5
T-201ENST00000296946 SUPT5HO00267 1087 aaKnown RBP30.67■■■□□ 2.5
T-201ENST00000296946 RSF1Q96T23 1441 aaPredicted RBP30.42■■■□□ 2.46
T-201ENST00000296946 MROH2BQ7Z745 1585 aa30.42■■■□□ 2.46
T-201ENST00000296946 BAZ1AQ9NRL2 1556 aaPredicted RBP30.3■■■□□ 2.44
T-201ENST00000296946 SMARCA4P51532 1647 aa30.24■■■□□ 2.43
T-201ENST00000296946 WIZO95785 1651 aa30.12■■■□□ 2.41
T-201ENST00000296946 EIF4G1Q04637 1599 aaKnown RBP30.06■■■□□ 2.4
T-201ENST00000296946 HRCP23327 699 aa30.05■■■□□ 2.4
T-201ENST00000296946 ATAD2BQ9ULI0 1458 aa29.88■■■□□ 2.37
T-201ENST00000296946 PEG3Q9GZU2 1588 aa29.83■■■□□ 2.37
T-201ENST00000296946 SMARCA2P51531 1590 aa29.74■■■□□ 2.35
T-201ENST00000296946 TOP2AP11388 1531 aaKnown RBP29.71■■■□□ 2.35
T-201ENST00000296946 CC2D2AQ9P2K1 1620 aa29.71■■■□□ 2.35
T-201ENST00000296946 BAZ1BQ9UIG0 1483 aaKnown RBP29.66■■■□□ 2.34
T-201ENST00000296946 NCAPD3P42695 1498 aa29.63■■■□□ 2.33
T-201ENST00000296946 CHIC1Q5VXU3 224 aa29.55■■■□□ 2.32
T-201ENST00000296946 CCDC88BA6NC98 1476 aa29.51■■■□□ 2.31
T-201ENST00000296946 DNAJC5BQ9UF47 199 aa29.5■■■□□ 2.31
T-201ENST00000296946 HMGXB3Q12766 1538 aa29.49■■■□□ 2.31
T-201ENST00000296946 PCGF6Q9BYE7 350 aa29.45■■■□□ 2.31
T-201ENST00000296946 PPARGC1BQ86YN6 1023 aaKnown RBP29.15■■■□□ 2.26
T-201ENST00000296946 CFTRP13569 1480 aa28.91■■■□□ 2.22
T-201ENST00000296946 CADPSQ9ULU8 1353 aa28.89■■■□□ 2.22
T-201ENST00000296946 NESP48681 1621 aa28.85■■■□□ 2.21
T-201ENST00000296946 ABCC8Q09428 1581 aa28.83■■■□□ 2.21
T-201ENST00000296946 PELP1Q8IZL8 1130 aaKnown RBP28.81■■■□□ 2.2
T-201ENST00000296946 TRIM26Q12899 539 aaPredicted RBP28.8■■■□□ 2.2
T-201ENST00000296946 TRIM41Q8WV44 630 aa28.75■■■□□ 2.19
T-201ENST00000296946 LOC105371045A0A1W2PR82 267 aa28.67■■■□□ 2.18
T-201ENST00000296946 ZEB1P37275 1124 aaPredicted RBP28.62■■■□□ 2.17
T-201ENST00000296946 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
T-201ENST00000296946 LAMC3Q9Y6N6 1575 aa28.6■■■□□ 2.17
T-201ENST00000296946 FANCD2Q9BXW9 1451 aa28.57■■■□□ 2.16
T-201ENST00000296946 PRDM2Q13029 1718 aa28.54■■■□□ 2.16
T-201ENST00000296946 SYNJ1O43426 1573 aa28.52■■■□□ 2.16
T-201ENST00000296946 PDS5BQ9NTI5 1447 aa28.45■■■□□ 2.14
T-201ENST00000296946 CUX1P39880 1505 aa28.44■■■□□ 2.14
T-201ENST00000296946 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
T-201ENST00000296946 FAM9AQ8IZU1 332 aaPredicted RBP28.36■■■□□ 2.13
T-201ENST00000296946 KIF21AQ7Z4S6 1674 aa28.35■■■□□ 2.13
T-201ENST00000296946 TOP2BQ02880 1626 aa28.34■■■□□ 2.13
T-201ENST00000296946 BIVM-ERCC5R4GMW8 1640 aa28.28■■■□□ 2.12
T-201ENST00000296946 URB2Q14146 1524 aaKnown RBP28.27■■■□□ 2.12
T-201ENST00000296946 SOGA1O94964 1423 aa28.26■■■□□ 2.11
T-201ENST00000296946 TOPBP1Q92547 1522 aa28.22■■■□□ 2.11
T-201ENST00000296946 RUSC2Q8N2Y8 1516 aa28.2■■■□□ 2.11
T-201ENST00000296946 ERCC6Q03468 1493 aa28.19■■■□□ 2.1
T-201ENST00000296946 DNMBPQ6XZF7 1577 aa28.18■■■□□ 2.1
T-201ENST00000296946 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
T-201ENST00000296946 SCAF1Q9H7N4 1312 aaKnown RBP28.12■■■□□ 2.09
T-201ENST00000296946 MRC2Q9UBG0 1479 aa28.1■■■□□ 2.09
T-201ENST00000296946 POLA1P09884 1462 aaPredicted RBP28.09■■■□□ 2.09
T-201ENST00000296946 EHMT2Q96KQ7 1210 aa28.08■■■□□ 2.09
T-201ENST00000296946 RAD54L2Q9Y4B4 1467 aa28.06■■■□□ 2.08
T-201ENST00000296946 THOC2Q8NI27 1593 aaKnown RBP27.96■■■□□ 2.07
T-201ENST00000296946 WDR62O43379 1518 aa27.95■■■□□ 2.07
T-201ENST00000296946 CSRNP3Q8WYN3 585 aa27.94■■■□□ 2.06
T-201ENST00000296946 CUX2O14529 1486 aa27.93■■■□□ 2.06
T-201ENST00000296946 EEA1Q15075 1411 aa27.89■■■□□ 2.06
T-201ENST00000296946 KIF27Q86VH2 1401 aa27.87■■■□□ 2.05
T-201ENST00000296946 ABCA10Q8WWZ4 1543 aa27.86■■■□□ 2.05
T-201ENST00000296946 TDRD9Q8NDG6 1382 aaKnown RBP27.83■■■□□ 2.05
T-201ENST00000296946 TARBP1Q13395 1621 aaKnown RBP27.8■■■□□ 2.04
T-201ENST00000296946 IGF1RP08069 1367 aa27.75■■■□□ 2.03
T-201ENST00000296946 WDR97A6NE52 1622 aa27.73■■■□□ 2.03
T-201ENST00000296946 ZNF608Q9ULD9 1512 aaPredicted RBP27.72■■■□□ 2.03
T-201ENST00000296946 MYT1Q01538 1121 aa27.71■■■□□ 2.03
T-201ENST00000296946 AQRO60306 1485 aaKnown RBP eCLIP27.7■■■□□ 2.02
T-201ENST00000296946 IFT140Q96RY7 1462 aa27.69■■■□□ 2.02
T-201ENST00000296946 ACIN1Q9UKV3 1341 aaKnown RBP27.68■■■□□ 2.02
T-201ENST00000296946 RAPGEF2Q9Y4G8 1499 aa27.66■■■□□ 2.02
T-201ENST00000296946 GAPVD1Q14C86 1478 aa27.65■■■□□ 2.02
T-201ENST00000296946 PRXQ9BXM0 1461 aa27.64■■■□□ 2.02
T-201ENST00000296946 ABCA5Q8WWZ7 1642 aa27.64■■■□□ 2.01
T-201ENST00000296946 UBTFP17480 764 aaKnown RBP27.6■■■□□ 2.01
T-201ENST00000296946 CARMIL1Q5VZK9 1371 aa27.58■■■□□ 2
T-201ENST00000296946 KIF21BO75037 1637 aa27.57■■■□□ 2
T-201ENST00000296946 GOLGA3Q08378 1498 aa27.57■■■□□ 2
T-201ENST00000296946 CENPBP07199 599 aaPredicted RBP27.49■■□□□ 1.99
T-201ENST00000296946 EIF4G3O43432 1585 aaKnown RBP27.49■■□□□ 1.99
T-201ENST00000296946 NEUROD1Q13562 356 aa27.49■■□□□ 1.99
T-201ENST00000296946 ERICH3Q5RHP9 1530 aa27.48■■□□□ 1.99
T-201ENST00000296946 TNIKQ9UKE5 1360 aa27.45■■□□□ 1.99
T-201ENST00000296946 GRIN2BQ13224 1484 aa27.45■■□□□ 1.98
T-201ENST00000296946 CCER1Q8TC90 406 aaPredicted RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms