RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 NISCHQ9Y2I1 1504 aa48.09■■■■■ 5.29
SUPT4H1-202ENST00000577396 CCDC180Q9P1Z9 1646 aa42.51■■■■■ 4.4
SUPT4H1-202ENST00000577396 ABCC9O60706 1549 aa41.37■■■■■ 4.21
SUPT4H1-202ENST00000577396 ZCCHC6Q5VYS8 1495 aaKnown RBP40.11■■■■■ 4.01
SUPT4H1-202ENST00000577396 DCAF8L2P0C7V8 631 aa40.07■■■■■ 4.01
SUPT4H1-202ENST00000577396 NACADO15069 1562 aa39.95■■■■□ 3.99
SUPT4H1-202ENST00000577396 RB1CC1Q8TDY2 1594 aa39.89■■■■□ 3.98
SUPT4H1-202ENST00000577396 MYO15BQ96JP2 1530 aa39.86■■■■□ 3.97
SUPT4H1-202ENST00000577396 DCAF1Q9Y4B6 1507 aa39.8■■■■□ 3.96
SUPT4H1-202ENST00000577396 UNC13AQ9UPW8 1703 aa38.98■■■■□ 3.83
SUPT4H1-202ENST00000577396 SCRIBQ14160 1630 aa38.83■■■■□ 3.81
SUPT4H1-202ENST00000577396 PABPN1Q86U42 306 aaKnown RBP eCLIP38.78■■■■□ 3.8
SUPT4H1-202ENST00000577396 BICRAQ9NZM4 1560 aa38.75■■■■□ 3.79
SUPT4H1-202ENST00000577396 SHROOM4Q9ULL8 1493 aa38.3■■■■□ 3.72
SUPT4H1-202ENST00000577396 DNAJC5BQ9UF47 199 aa37.83■■■■□ 3.65
SUPT4H1-202ENST00000577396 EIF4G1Q04637 1599 aaKnown RBP37.66■■■■□ 3.62
SUPT4H1-202ENST00000577396 CECR2Q9BXF3 1484 aa37.47■■■■□ 3.59
SUPT4H1-202ENST00000577396 CC2D2AQ9P2K1 1620 aa37.42■■■■□ 3.58
SUPT4H1-202ENST00000577396 BAZ1AQ9NRL2 1556 aaPredicted RBP37.21■■■■□ 3.55
SUPT4H1-202ENST00000577396 SMARCA4P51532 1647 aa37.2■■■■□ 3.54
SUPT4H1-202ENST00000577396 MROH2BQ7Z745 1585 aa37.08■■■■□ 3.53
SUPT4H1-202ENST00000577396 ATAD2BQ9ULI0 1458 aa36.98■■■■□ 3.51
SUPT4H1-202ENST00000577396 NCAPD3P42695 1498 aa36.93■■■■□ 3.5
SUPT4H1-202ENST00000577396 SMARCA2P51531 1590 aa36.88■■■■□ 3.49
SUPT4H1-202ENST00000577396 PEG3Q9GZU2 1588 aa36.87■■■■□ 3.49
SUPT4H1-202ENST00000577396 RSF1Q96T23 1441 aaPredicted RBP36.8■■■■□ 3.48
SUPT4H1-202ENST00000577396 HMGXB3Q12766 1538 aa36.7■■■■□ 3.46
SUPT4H1-202ENST00000577396 WIZO95785 1651 aa36.66■■■■□ 3.46
SUPT4H1-202ENST00000577396 BAZ1BQ9UIG0 1483 aaKnown RBP36.63■■■■□ 3.45
SUPT4H1-202ENST00000577396 TOP2AP11388 1531 aaKnown RBP36.27■■■■□ 3.4
SUPT4H1-202ENST00000577396 SUPT5HO00267 1087 aaKnown RBP36.09■■■■□ 3.37
SUPT4H1-202ENST00000577396 NESP48681 1621 aa35.92■■■■□ 3.34
SUPT4H1-202ENST00000577396 CCDC88BA6NC98 1476 aa35.91■■■■□ 3.34
SUPT4H1-202ENST00000577396 CADPSQ9ULU8 1353 aa35.87■■■■□ 3.33
SUPT4H1-202ENST00000577396 LAMC3Q9Y6N6 1575 aa35.82■■■■□ 3.33
SUPT4H1-202ENST00000577396 CFTRP13569 1480 aa35.71■■■■□ 3.31
SUPT4H1-202ENST00000577396 PDS5BQ9NTI5 1447 aa35.61■■■■□ 3.29
SUPT4H1-202ENST00000577396 ERCC6Q03468 1493 aa35.58■■■■□ 3.29
SUPT4H1-202ENST00000577396 KIF21AQ7Z4S6 1674 aa35.42■■■■□ 3.26
SUPT4H1-202ENST00000577396 FANCD2Q9BXW9 1451 aa35.41■■■■□ 3.26
SUPT4H1-202ENST00000577396 PRDM2Q13029 1718 aa35.32■■■■□ 3.24
SUPT4H1-202ENST00000577396 CEP164Q9UPV0 1460 aa35.3■■■■□ 3.24
SUPT4H1-202ENST00000577396 THOC2Q8NI27 1593 aaKnown RBP35.24■■■■□ 3.23
SUPT4H1-202ENST00000577396 MRC2Q9UBG0 1479 aa35.19■■■■□ 3.22
SUPT4H1-202ENST00000577396 CUX2O14529 1486 aa35.12■■■■□ 3.21
SUPT4H1-202ENST00000577396 WDR62O43379 1518 aa35.07■■■■□ 3.2
SUPT4H1-202ENST00000577396 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
SUPT4H1-202ENST00000577396 ABCC8Q09428 1581 aa34.88■■■■□ 3.17
SUPT4H1-202ENST00000577396 TOPBP1Q92547 1522 aa34.88■■■■□ 3.17
SUPT4H1-202ENST00000577396 DNMBPQ6XZF7 1577 aa34.83■■■■□ 3.17
SUPT4H1-202ENST00000577396 CUX1P39880 1505 aa34.75■■■■□ 3.15
SUPT4H1-202ENST00000577396 WRNQ14191 1432 aaPredicted RBP eCLIP34.64■■■■□ 3.14
SUPT4H1-202ENST00000577396 POLA1P09884 1462 aaPredicted RBP34.62■■■■□ 3.13
SUPT4H1-202ENST00000577396 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
SUPT4H1-202ENST00000577396 FGD5Q6ZNL6 1462 aa34.56■■■■□ 3.12
SUPT4H1-202ENST00000577396 SYNJ1O43426 1573 aa34.52■■■■□ 3.12
SUPT4H1-202ENST00000577396 TOP2BQ02880 1626 aa34.51■■■■□ 3.11
SUPT4H1-202ENST00000577396 SOGA1O94964 1423 aa34.5■■■■□ 3.11
SUPT4H1-202ENST00000577396 RAD54L2Q9Y4B4 1467 aa34.48■■■■□ 3.11
SUPT4H1-202ENST00000577396 TARBP1Q13395 1621 aaKnown RBP34.47■■■■□ 3.11
SUPT4H1-202ENST00000577396 BIVM-ERCC5R4GMW8 1640 aa34.47■■■■□ 3.11
SUPT4H1-202ENST00000577396 ZNF608Q9ULD9 1512 aaPredicted RBP34.43■■■■□ 3.1
SUPT4H1-202ENST00000577396 AQRO60306 1485 aaKnown RBP eCLIP34.29■■■■□ 3.085e-8■■■■■ 32.2
SUPT4H1-202ENST00000577396 TDRD9Q8NDG6 1382 aaKnown RBP34.28■■■■□ 3.08
SUPT4H1-202ENST00000577396 ABCA10Q8WWZ4 1543 aa34.26■■■■□ 3.08
SUPT4H1-202ENST00000577396 EIF4G3O43432 1585 aaKnown RBP34.22■■■■□ 3.07
SUPT4H1-202ENST00000577396 WDR97A6NE52 1622 aa34.2■■■■□ 3.07
SUPT4H1-202ENST00000577396 GAPVD1Q14C86 1478 aa34.08■■■■□ 3.05
SUPT4H1-202ENST00000577396 TRIM41Q8WV44 630 aa34.08■■■■□ 3.05
SUPT4H1-202ENST00000577396 ABCA5Q8WWZ7 1642 aa34.06■■■■□ 3.04
SUPT4H1-202ENST00000577396 GRIN2BQ13224 1484 aa34.03■■■■□ 3.04
SUPT4H1-202ENST00000577396 CHIC1Q5VXU3 224 aa33.93■■■■□ 3.02
SUPT4H1-202ENST00000577396 SNAPC4Q5SXM2 1469 aa33.92■■■■□ 3.02
SUPT4H1-202ENST00000577396 PBRM1Q86U86 1689 aa33.89■■■■□ 3.02
SUPT4H1-202ENST00000577396 MAGI1Q96QZ7 1491 aaPredicted RBP33.89■■■■□ 3.02
SUPT4H1-202ENST00000577396 KIF27Q86VH2 1401 aa33.89■■■■□ 3.02
SUPT4H1-202ENST00000577396 ERICH3Q5RHP9 1530 aa33.84■■■■□ 3.01
SUPT4H1-202ENST00000577396 OSCARQ8IYS5 282 aa33.8■■■■□ 3
SUPT4H1-202ENST00000577396 IGF1RP08069 1367 aa33.79■■■■□ 3
SUPT4H1-202ENST00000577396 FBLN2P98095 1184 aa33.79■■■■□ 3
SUPT4H1-202ENST00000577396 DNAJC5Q9H3Z4 198 aa33.78■■■■□ 3
SUPT4H1-202ENST00000577396 SYNJ2O15056 1496 aa33.76■■■■□ 3
SUPT4H1-202ENST00000577396 CHMP7Q8WUX9 453 aaPredicted RBP33.76■■■■□ 3
SUPT4H1-202ENST00000577396 RUSC2Q8N2Y8 1516 aa33.74■■■□□ 2.99
SUPT4H1-202ENST00000577396 CHD1O14646 1710 aa33.71■■■□□ 2.99
SUPT4H1-202ENST00000577396 FHAD1B1AJZ9 1412 aa33.7■■■□□ 2.99
SUPT4H1-202ENST00000577396 ADAMTS12P58397 1594 aa33.69■■■□□ 2.98
SUPT4H1-202ENST00000577396 GRIN2AQ12879 1464 aa33.59■■■□□ 2.97
SUPT4H1-202ENST00000577396 CARMIL1Q5VZK9 1371 aa33.55■■■□□ 2.96
SUPT4H1-202ENST00000577396 CUL7Q14999 1698 aa33.54■■■□□ 2.96
SUPT4H1-202ENST00000577396 NUP160Q12769 1436 aa33.45■■■□□ 2.95
SUPT4H1-202ENST00000577396 EEA1Q15075 1411 aa33.44■■■□□ 2.94
SUPT4H1-202ENST00000577396 CSRNP3Q8WYN3 585 aa33.43■■■□□ 2.94
SUPT4H1-202ENST00000577396 CLASP1Q7Z460 1538 aa33.42■■■□□ 2.94
SUPT4H1-202ENST00000577396 CEP170Q5SW79 1584 aa33.4■■■□□ 2.94
SUPT4H1-202ENST00000577396 PRXQ9BXM0 1461 aa33.36■■■□□ 2.93
SUPT4H1-202ENST00000577396 RAPGEF2Q9Y4G8 1499 aa33.36■■■□□ 2.93
SUPT4H1-202ENST00000577396 FAM9AQ8IZU1 332 aaPredicted RBP33.35■■■□□ 2.93
SUPT4H1-202ENST00000577396 KIAA0586Q9BVV6 1533 aa33.21■■■□□ 2.91
SUPT4H1-202ENST00000577396 ARHGEF11O15085 1522 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms