Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.27□□□□□ -1.576e-22■□□□□ 8.3
NKRFO15226 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 39e-6■□□□□ 8.3
NKRFO15226 SEMA3B-215ENST00000621029 934 ntTSL 533.62■■■□□ 2.979e-6■□□□□ 8.3
NKRFO15226 RELA-211ENST00000527749 771 ntTSL 531.56■■■□□ 2.649e-6■□□□□ 8.3
NKRFO15226 RELA-223ENST00000534283 575 ntTSL 528.36■■■□□ 2.139e-6■□□□□ 8.3
NKRFO15226 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.19e-6■□□□□ 8.3
NKRFO15226 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.07■■□□□ 1.449e-6■□□□□ 8.3
NKRFO15226 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.359e-6■□□□□ 8.3
NKRFO15226 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.199e-6■□□□□ 8.3
NKRFO15226 HPN-204ENST00000593305 2175 ntTSL 221.89■■□□□ 1.19e-6■□□□□ 8.3
NKRFO15226 RELA-221ENST00000533187 456 ntTSL 321.51■■□□□ 1.039e-6■□□□□ 8.3
NKRFO15226 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.999e-6■□□□□ 8.3
NKRFO15226 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.11■□□□□ 0.979e-6■□□□□ 8.3
NKRFO15226 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.959e-6■□□□□ 8.3
NKRFO15226 SEMA3B-211ENST00000612509 1061 ntTSL 520.81■□□□□ 0.929e-6■□□□□ 8.3
NKRFO15226 ARFRP1-205ENST00000610414 1251 ntTSL 220.58■□□□□ 0.896e-9■□□□□ 8.3
NKRFO15226 RELA-215ENST00000529389 992 ntTSL 320.3■□□□□ 0.849e-6■□□□□ 8.3
NKRFO15226 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.15■□□□□ 0.829e-6■□□□□ 8.3
NKRFO15226 SYNJ2-209ENST00000640569 2040 nt20.03■□□□□ 0.89e-6■□□□□ 8.3
NKRFO15226 RELA-224ENST00000534305 666 ntTSL 319.88■□□□□ 0.779e-6■□□□□ 8.3
NKRFO15226 ARFRP1-203ENST00000609188 225 ntTSL 519.88■□□□□ 0.776e-9■□□□□ 8.3
NKRFO15226 ARFRP1-209ENST00000612772 1375 ntTSL 319.62■□□□□ 0.736e-9■□□□□ 8.3
NKRFO15226 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.729e-6■□□□□ 8.3
NKRFO15226 HPN-203ENST00000541345 1820 ntTSL 219.53■□□□□ 0.729e-6■□□□□ 8.3
NKRFO15226 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.619e-6■□□□□ 8.3
NKRFO15226 RELA-218ENST00000532776 602 ntTSL 218.83■□□□□ 0.69e-6■□□□□ 8.3
NKRFO15226 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.74■□□□□ 0.599e-6■□□□□ 8.3
NKRFO15226 RELA-213ENST00000527909 591 ntTSL 518.67■□□□□ 0.589e-6■□□□□ 8.3
NKRFO15226 RELA-216ENST00000531238 541 ntTSL 418.67■□□□□ 0.589e-6■□□□□ 8.3
NKRFO15226 RELA-222ENST00000533546 569 ntTSL 418.67■□□□□ 0.589e-6■□□□□ 8.3
NKRFO15226 HPN-205ENST00000596662 584 ntTSL 418.57■□□□□ 0.569e-6■□□□□ 8.3
NKRFO15226 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.52■□□□□ 0.569e-6■□□□□ 8.3
NKRFO15226 SEMA3B-207ENST00000441915 2710 ntTSL 1 (best)18.35■□□□□ 0.539e-6■□□□□ 8.3
NKRFO15226 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.23■□□□□ 0.519e-6■□□□□ 8.3
NKRFO15226 MIR8072-201ENST00000614241 80 ntBASIC17.99■□□□□ 0.479e-6■□□□□ 8.3
NKRFO15226 CNOT6L-207ENST00000515441 572 ntTSL 417.81■□□□□ 0.449e-6■□□□□ 8.3
NKRFO15226 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.379e-6■□□□□ 8.3
NKRFO15226 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.37■□□□□ 0.379e-6■□□□□ 8.3
NKRFO15226 SEMA3B-214ENST00000619119 3158 ntTSL 516.97■□□□□ 0.319e-6■□□□□ 8.3
NKRFO15226 RELA-204ENST00000525658 808 ntTSL 216.85■□□□□ 0.299e-6■□□□□ 8.3
NKRFO15226 TRIP10-212ENST00000600677 2022 ntTSL 516.73■□□□□ 0.279e-6■□□□□ 8.3
NKRFO15226 RELA-220ENST00000532999 1341 ntTSL 516.45■□□□□ 0.229e-6■□□□□ 8.3
NKRFO15226 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.38■□□□□ 0.219e-6■□□□□ 8.3
NKRFO15226 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.15■□□□□ 0.189e-6■□□□□ 8.3
NKRFO15226 TRIP10-203ENST00000595305 2068 ntTSL 216.13■□□□□ 0.179e-6■□□□□ 8.3
NKRFO15226 RELA-225ENST00000534558 692 ntTSL 516.01■□□□□ 0.159e-6■□□□□ 8.3
NKRFO15226 RELA-206ENST00000525858 754 ntTSL 215.8■□□□□ 0.129e-6■□□□□ 8.3
NKRFO15226 RELA-203ENST00000525301 623 ntTSL 315.6■□□□□ 0.099e-6■□□□□ 8.3
NKRFO15226 RELA-208ENST00000526283 2004 ntTSL 515.42■□□□□ 0.069e-6■□□□□ 8.3
NKRFO15226 RELA-210ENST00000527074 585 ntTSL 213.24□□□□□ -0.299e-6■□□□□ 8.3
NKRFO15226 CNOT6L-204ENST00000506166 781 ntTSL 212.68□□□□□ -0.389e-6■□□□□ 8.3
NKRFO15226 RELA-205ENST00000525693 3183 ntTSL 1 (best) BASIC12.32□□□□□ -0.449e-6■□□□□ 8.3
NKRFO15226 TTLL4-202ENST00000392102 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.59e-6■□□□□ 8.3
NKRFO15226 RELA-219ENST00000532879 567 ntTSL 511.62□□□□□ -0.559e-6■□□□□ 8.3
NKRFO15226 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.589e-6■□□□□ 8.3
NKRFO15226 RELA-217ENST00000531484 2251 ntTSL 211.4□□□□□ -0.589e-6■□□□□ 8.3
NKRFO15226 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.949e-6■□□□□ 8.3
NKRFO15226 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.95□□□□□ -1.149e-6■□□□□ 8.3
NKRFO15226 CNOT6L-202ENST00000504804 1925 ntTSL 56.5□□□□□ -1.379e-6■□□□□ 8.3
NKRFO15226 CNOT6L-206ENST00000512485 1890 ntTSL 56.22□□□□□ -1.419e-6■□□□□ 8.3
NKRFO15226 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.789e-6■□□□□ 8.3
NKRFO15226 C20orf27-203ENST00000399672 1734 ntAPPRIS P1 TSL 228.4■■■□□ 2.142e-6■□□□□ 8.2
NKRFO15226 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.712e-6■□□□□ 8.2
NKRFO15226 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.82■■□□□ 1.242e-6■□□□□ 8.2
NKRFO15226 C20orf27-204ENST00000399683 933 ntTSL 218.69■□□□□ 0.582e-6■□□□□ 8.2
NKRFO15226 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.511e-7■□□□□ 8.2
NKRFO15226 SKP1-206ENST00000519321 692 ntTSL 325.87■■□□□ 1.731e-7■□□□□ 8.2
NKRFO15226 MVD-209ENST00000565149 2352 ntTSL 1 (best)21.4■■□□□ 1.021e-7■□□□□ 8.2
NKRFO15226 SKP1-213ENST00000524288 732 ntTSL 1 (best)7.86□□□□□ -1.151e-7■□□□□ 8.2
NKRFO15226 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.231e-7■□□□□ 8.2
NKRFO15226 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.461e-7■□□□□ 8.2
NKRFO15226 SKP1-205ENST00000519054 654 ntTSL 35.63□□□□□ -1.511e-7■□□□□ 8.2
NKRFO15226 SKP1-201ENST00000328392 572 ntTSL 55.48□□□□□ -1.531e-7■□□□□ 8.2
NKRFO15226 SKP1-212ENST00000523966 899 ntTSL 35.38□□□□□ -1.551e-7■□□□□ 8.2
NKRFO15226 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.631e-7■□□□□ 8.2
NKRFO15226 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.691e-7■□□□□ 8.2
NKRFO15226 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.29□□□□□ -1.721e-7■□□□□ 8.2
NKRFO15226 TRAF4-206ENST00000454852 672 ntTSL 312.71□□□□□ -0.374e-10■□□□□ 8.2
NKRFO15226 HIPK3-205ENST00000531504 591 ntTSL 223.48■■□□□ 1.353e-7■□□□□ 8.2
NKRFO15226 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.013e-7■□□□□ 8.2
NKRFO15226 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-7■□□□□ 8.2
NKRFO15226 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-7■□□□□ 8.2
NKRFO15226 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.083e-7■□□□□ 8.2
NKRFO15226 AGPAT3-207ENST00000445582 582 ntTSL 314.45□□□□□ -0.13e-7■□□□□ 8.2
NKRFO15226 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.06□□□□□ -0.163e-7■□□□□ 8.2
NKRFO15226 AGPAT3-208ENST00000448287 454 ntTSL 313.64□□□□□ -0.233e-7■□□□□ 8.2
NKRFO15226 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.323e-7■□□□□ 8.2
NKRFO15226 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.9□□□□□ -0.983e-7■□□□□ 8.2
NKRFO15226 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.593e-7■□□□□ 8.2
NKRFO15226 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23■■□□□ 1.272e-12■□□□□ 8.1
NKRFO15226 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)18.74■□□□□ 0.592e-12■□□□□ 8.1
NKRFO15226 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)16.53■□□□□ 0.242e-12■□□□□ 8.1
NKRFO15226 CBX4-203ENST00000494546 432 ntTSL 338.46■■■■□ 3.753e-6■□□□□ 8.1
NKRFO15226 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC38.33■■■■□ 3.733e-6■□□□□ 8.1
NKRFO15226 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.263e-6■□□□□ 8.1
NKRFO15226 SSSCA1-207ENST00000533115 1077 ntTSL 335.08■■■■□ 3.213e-6■□□□□ 8.1
NKRFO15226 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.14■■■■□ 3.063e-6■□□□□ 8.1
NKRFO15226 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.66■■■□□ 2.666e-7■□□□□ 8.1
NKRFO15226 RCC1-212ENST00000486790 481 ntTSL 531.12■■■□□ 2.573e-6■□□□□ 8.1
NKRFO15226 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.02■■■□□ 2.563e-6■□□□□ 8.1
Retrieved 100 of 9,198 protein–RNA pairs in 102.7 ms