RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 DCAF8L2P0C7V8 631 aa24.19■■□□□ 1.46
HIPK3-201ENST00000303296 PELP1Q8IZL8 1130 aaKnown RBP23.31■■□□□ 1.32
HIPK3-201ENST00000303296 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
HIPK3-201ENST00000303296 ERICH6Q7L0X2 663 aa22.81■■□□□ 1.24
HIPK3-201ENST00000303296 SUPT5HO00267 1087 aaKnown RBP22.51■■□□□ 1.19
HIPK3-201ENST00000303296 MYT1Q01538 1121 aa22.38■■□□□ 1.17
HIPK3-201ENST00000303296 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
HIPK3-201ENST00000303296 APLP2Q06481 763 aa22.23■■□□□ 1.15
HIPK3-201ENST00000303296 TTBK1Q5TCY1 1321 aaPredicted RBP22.23■■□□□ 1.15
HIPK3-201ENST00000303296 FAM9AQ8IZU1 332 aaPredicted RBP22■■□□□ 1.11
HIPK3-201ENST00000303296 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
HIPK3-201ENST00000303296 ATP1B4Q9UN42 357 aaPredicted RBP21.77■■□□□ 1.08
HIPK3-201ENST00000303296 SHROOM4Q9ULL8 1493 aa21.74■■□□□ 1.07
HIPK3-201ENST00000303296 PCGF6Q9BYE7 350 aa21.73■■□□□ 1.07
HIPK3-201ENST00000303296 CENPBP07199 599 aaPredicted RBP21.69■■□□□ 1.06
HIPK3-201ENST00000303296 NEFLP07196 543 aa21.67■■□□□ 1.06
HIPK3-201ENST00000303296 DAXXQ9UER7 740 aaPredicted RBP21.62■■□□□ 1.05
HIPK3-201ENST00000303296 YTHDC1Q96MU7 727 aaKnown RBP21.58■■□□□ 1.05
HIPK3-201ENST00000303296 POLR3GLQ9BT43 218 aa21.28■■□□□ 1
HIPK3-201ENST00000303296 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
HIPK3-201ENST00000303296 CNGB1Q14028 1251 aaPredicted RBP21.23■□□□□ 0.99
HIPK3-201ENST00000303296 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
HIPK3-201ENST00000303296 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
HIPK3-201ENST00000303296 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.96
HIPK3-201ENST00000303296 CLSPNQ9HAW4 1339 aa20.96■□□□□ 0.95
HIPK3-201ENST00000303296 ZEB1P37275 1124 aaPredicted RBP20.87■□□□□ 0.93
HIPK3-201ENST00000303296 UBTFP17480 764 aaKnown RBP20.84■□□□□ 0.93
HIPK3-201ENST00000303296 RTL5Q5HYW3 569 aaPredicted RBP20.83■□□□□ 0.92
HIPK3-201ENST00000303296 PPARGC1BQ86YN6 1023 aaKnown RBP20.78■□□□□ 0.92
HIPK3-201ENST00000303296 BCL11AQ9H165 835 aa20.76■□□□□ 0.91
HIPK3-201ENST00000303296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
HIPK3-201ENST00000303296 HNRNPUL2Q1KMD3 747 aaKnown RBP20.71■□□□□ 0.91
HIPK3-201ENST00000303296 ITGAEP38570 1179 aa20.69■□□□□ 0.9
HIPK3-201ENST00000303296 SLC24A1O60721 1099 aa20.66■□□□□ 0.9
HIPK3-201ENST00000303296 TRIM41Q8WV44 630 aa20.55■□□□□ 0.88
HIPK3-201ENST00000303296 ZBTB47Q9UFB7 747 aaPredicted RBP20.46■□□□□ 0.87
HIPK3-201ENST00000303296 BCANQ96GW7 911 aa20.19■□□□□ 0.82
HIPK3-201ENST00000303296 EIF5BO60841 1220 aaKnown RBP20.19■□□□□ 0.82
HIPK3-201ENST00000303296 CANXP27824 592 aaKnown RBP20.12■□□□□ 0.81
HIPK3-201ENST00000303296 CDK11AQ9UQ88 783 aaPredicted RBP19.95■□□□□ 0.78
HIPK3-201ENST00000303296 HRCP23327 699 aa19.95■□□□□ 0.78
HIPK3-201ENST00000303296 ANP32BQ92688 251 aaKnown RBP19.94■□□□□ 0.78
HIPK3-201ENST00000303296 ZNF326Q5BKZ1 582 aaKnown RBP19.93■□□□□ 0.78
HIPK3-201ENST00000303296 NPM2Q86SE8 214 aaKnown RBP19.93■□□□□ 0.78
HIPK3-201ENST00000303296 TRIM52Q96A61 297 aa19.9■□□□□ 0.78
HIPK3-201ENST00000303296 NEFMP07197 916 aa19.87■□□□□ 0.77
HIPK3-201ENST00000303296 HSP90AA1P07900 732 aaKnown RBP19.87■□□□□ 0.77
HIPK3-201ENST00000303296 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
HIPK3-201ENST00000303296 CDK11BP21127 795 aaKnown RBP19.84■□□□□ 0.77
HIPK3-201ENST00000303296 TRIM26Q12899 539 aaPredicted RBP19.84■□□□□ 0.77
HIPK3-201ENST00000303296 FAM50AQ14320 339 aaKnown RBP19.82■□□□□ 0.76
HIPK3-201ENST00000303296 ARXQ96QS3 562 aa19.82■□□□□ 0.76
HIPK3-201ENST00000303296 PLPPR3Q6T4P5 718 aa19.79■□□□□ 0.76
HIPK3-201ENST00000303296 DIEXFQ68CQ4 756 aaKnown RBP19.74■□□□□ 0.75
HIPK3-201ENST00000303296 TULP1O00294 542 aaPredicted RBP19.74■□□□□ 0.75
HIPK3-201ENST00000303296 ANP32AP39687 249 aaKnown RBP19.72■□□□□ 0.75
HIPK3-201ENST00000303296 GLIPR1L2Q4G1C9 344 aa19.72■□□□□ 0.75
HIPK3-201ENST00000303296 A0A0G2JS52 829 aa19.67■□□□□ 0.74
HIPK3-201ENST00000303296 ANP32CO43423 234 aa19.63■□□□□ 0.73
HIPK3-201ENST00000303296 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
HIPK3-201ENST00000303296 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
HIPK3-201ENST00000303296 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
HIPK3-201ENST00000303296 UPF2Q9HAU5 1272 aaKnown RBP19.47■□□□□ 0.71
HIPK3-201ENST00000303296 NBR1Q14596 966 aa19.46■□□□□ 0.71
HIPK3-201ENST00000303296 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
HIPK3-201ENST00000303296 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
HIPK3-201ENST00000303296 PLEKHG5O94827 1062 aa19.42■□□□□ 0.7
HIPK3-201ENST00000303296 FBLN2P98095 1184 aa19.38■□□□□ 0.69
HIPK3-201ENST00000303296 SALL2Q9Y467 1007 aaPredicted RBP19.37■□□□□ 0.69
HIPK3-201ENST00000303296 TPRNQ4KMQ1 711 aa19.35■□□□□ 0.69
HIPK3-201ENST00000303296 ESF1Q9H501 851 aaKnown RBP19.35■□□□□ 0.69
HIPK3-201ENST00000303296 STAG3Q9UJ98 1225 aa19.34■□□□□ 0.69
HIPK3-201ENST00000303296 CHGAP10645 457 aaKnown RBP19.3■□□□□ 0.68
HIPK3-201ENST00000303296 ZBTB7CA1YPR0 619 aa19.27■□□□□ 0.68
HIPK3-201ENST00000303296 ARID3CA6NKF2 412 aa19.27■□□□□ 0.68
HIPK3-201ENST00000303296 TAOK2Q9UL54 1235 aa19.26■□□□□ 0.67
HIPK3-201ENST00000303296 AMER1Q5JTC6 1135 aaPredicted RBP19.26■□□□□ 0.67
HIPK3-201ENST00000303296 TNNT2P45379 298 aaPredicted RBP19.2■□□□□ 0.66
HIPK3-201ENST00000303296 DNTTIP2Q5QJE6 756 aaKnown RBP19.14■□□□□ 0.65
HIPK3-201ENST00000303296 TRIM44Q96DX7 344 aaPredicted RBP19.14■□□□□ 0.65
HIPK3-201ENST00000303296 FKBP8Q14318 412 aa19.13■□□□□ 0.65
HIPK3-201ENST00000303296 SENP3Q9H4L4 574 aaPredicted RBP19.13■□□□□ 0.65
HIPK3-201ENST00000303296 ZNF777Q9ULD5 760 aaPredicted RBP19.12■□□□□ 0.65
HIPK3-201ENST00000303296 NCLP19338 710 aaKnown RBP19.11■□□□□ 0.65
HIPK3-201ENST00000303296 ZRSR1Q15695 479 aaKnown RBP19.11■□□□□ 0.65
HIPK3-201ENST00000303296 CLSTN1O94985 981 aa19.09■□□□□ 0.65
HIPK3-201ENST00000303296 PTMAP06454 111 aaKnown RBP19.08■□□□□ 0.64
HIPK3-201ENST00000303296 FAM9BQ8IZU0 186 aa19.07■□□□□ 0.64
HIPK3-201ENST00000303296 C14orf37Q86TY3 774 aa19.06■□□□□ 0.64
HIPK3-201ENST00000303296 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.06■□□□□ 0.64
HIPK3-201ENST00000303296 MYH16Q9H6N6 1097 aa19.05■□□□□ 0.64
HIPK3-201ENST00000303296 PRM3Q9NNZ6 103 aa19.03■□□□□ 0.64
HIPK3-201ENST00000303296 CCDC136Q96JN2 1154 aa18.98■□□□□ 0.63
HIPK3-201ENST00000303296 NPHP1O15259 732 aa18.97■□□□□ 0.63
HIPK3-201ENST00000303296 PLCB2Q00722 1185 aa18.97■□□□□ 0.63
HIPK3-201ENST00000303296 HNRNPUQ00839 825 aaKnown RBP eCLIP18.97■□□□□ 0.63
HIPK3-201ENST00000303296 P3H3Q8IVL6 736 aa18.95■□□□□ 0.62
HIPK3-201ENST00000303296 HAP1P54257 671 aaPredicted RBP18.92■□□□□ 0.62
HIPK3-201ENST00000303296 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
HIPK3-201ENST00000303296 NAP1L5Q96NT1 182 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms