RNA–Protein interactions for RNA: ENST00000525858.5

RELA-206, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-206ENST00000525858 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
RELA-206ENST00000525858 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
RELA-206ENST00000525858 ABCC9O60706 1549 aa29.45■■■□□ 2.31
RELA-206ENST00000525858 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
RELA-206ENST00000525858 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.11
RELA-206ENST00000525858 DCAF8L2P0C7V8 631 aa28.17■■■□□ 2.1
RELA-206ENST00000525858 NACADO15069 1562 aa28.16■■■□□ 2.1
RELA-206ENST00000525858 ZCCHC6Q5VYS8 1495 aaKnown RBP28.09■■■□□ 2.09
RELA-206ENST00000525858 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
RELA-206ENST00000525858 DCAF1Q9Y4B6 1507 aa27.85■■■□□ 2.05
RELA-206ENST00000525858 UNC13AQ9UPW8 1703 aa27.69■■■□□ 2.02
RELA-206ENST00000525858 PABPN1Q86U42 306 aaKnown RBP eCLIP27.54■■■□□ 2
RELA-206ENST00000525858 BICRAQ9NZM4 1560 aa27.5■■□□□ 1.99
RELA-206ENST00000525858 SCRIBQ14160 1630 aa27.39■■□□□ 1.98
RELA-206ENST00000525858 DNAJC5Q9H3Z4 198 aa27.11■■□□□ 1.93
RELA-206ENST00000525858 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
RELA-206ENST00000525858 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
RELA-206ENST00000525858 CC2D2AQ9P2K1 1620 aa26.63■■□□□ 1.85
RELA-206ENST00000525858 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
RELA-206ENST00000525858 SMARCA4P51532 1647 aa26.18■■□□□ 1.78
RELA-206ENST00000525858 BAZ1AQ9NRL2 1556 aaPredicted RBP26.09■■□□□ 1.77
RELA-206ENST00000525858 ATAD2BQ9ULI0 1458 aa26.07■■□□□ 1.76
RELA-206ENST00000525858 MROH2BQ7Z745 1585 aa26.05■■□□□ 1.76
RELA-206ENST00000525858 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
RELA-206ENST00000525858 SMARCA2P51531 1590 aa25.95■■□□□ 1.74
RELA-206ENST00000525858 PEG3Q9GZU2 1588 aa25.91■■□□□ 1.74
RELA-206ENST00000525858 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
RELA-206ENST00000525858 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
RELA-206ENST00000525858 WIZO95785 1651 aa25.76■■□□□ 1.71
RELA-206ENST00000525858 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
RELA-206ENST00000525858 CUX2O14529 1486 aa25.6■■□□□ 1.69
RELA-206ENST00000525858 NESP48681 1621 aa25.52■■□□□ 1.68
RELA-206ENST00000525858 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
RELA-206ENST00000525858 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
RELA-206ENST00000525858 LAMC3Q9Y6N6 1575 aa25.31■■□□□ 1.64
RELA-206ENST00000525858 ERCC6Q03468 1493 aa25.28■■□□□ 1.64
RELA-206ENST00000525858 CADPSQ9ULU8 1353 aa25.27■■□□□ 1.64
RELA-206ENST00000525858 KIF21AQ7Z4S6 1674 aa25.17■■□□□ 1.62
RELA-206ENST00000525858 CCDC88BA6NC98 1476 aa25.16■■□□□ 1.62
RELA-206ENST00000525858 CFTRP13569 1480 aa25.12■■□□□ 1.61
RELA-206ENST00000525858 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
RELA-206ENST00000525858 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
RELA-206ENST00000525858 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
RELA-206ENST00000525858 FANCD2Q9BXW9 1451 aa24.98■■□□□ 1.59
RELA-206ENST00000525858 CEP164Q9UPV0 1460 aa24.92■■□□□ 1.58
RELA-206ENST00000525858 MRC2Q9UBG0 1479 aa24.91■■□□□ 1.58
RELA-206ENST00000525858 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
RELA-206ENST00000525858 WDR62O43379 1518 aa24.86■■□□□ 1.57
RELA-206ENST00000525858 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
RELA-206ENST00000525858 TOPBP1Q92547 1522 aa24.6■■□□□ 1.53
RELA-206ENST00000525858 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
RELA-206ENST00000525858 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
RELA-206ENST00000525858 CUX1P39880 1505 aa24.43■■□□□ 1.5
RELA-206ENST00000525858 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
RELA-206ENST00000525858 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
RELA-206ENST00000525858 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.5
RELA-206ENST00000525858 TARBP1Q13395 1621 aaKnown RBP24.35■■□□□ 1.49
RELA-206ENST00000525858 RAD54L2Q9Y4B4 1467 aa24.33■■□□□ 1.49
RELA-206ENST00000525858 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
RELA-206ENST00000525858 SOGA1O94964 1423 aa24.26■■□□□ 1.47
RELA-206ENST00000525858 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
RELA-206ENST00000525858 AQRO60306 1485 aaKnown RBP eCLIP24.24■■□□□ 1.471e-9■■■■■ 34.9
RELA-206ENST00000525858 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
RELA-206ENST00000525858 OSCARQ8IYS5 282 aa24.22■■□□□ 1.47
RELA-206ENST00000525858 SYNJ1O43426 1573 aa24.2■■□□□ 1.46
RELA-206ENST00000525858 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.46
RELA-206ENST00000525858 TDRD9Q8NDG6 1382 aaKnown RBP24.17■■□□□ 1.46
RELA-206ENST00000525858 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
RELA-206ENST00000525858 WDR97A6NE52 1622 aa24.14■■□□□ 1.46
RELA-206ENST00000525858 TOP2BQ02880 1626 aa24.14■■□□□ 1.46
RELA-206ENST00000525858 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
RELA-206ENST00000525858 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
RELA-206ENST00000525858 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
RELA-206ENST00000525858 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
RELA-206ENST00000525858 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
RELA-206ENST00000525858 SNAPC4Q5SXM2 1469 aa23.98■■□□□ 1.43
RELA-206ENST00000525858 GAPVD1Q14C86 1478 aa23.97■■□□□ 1.43
RELA-206ENST00000525858 CHD1O14646 1710 aa23.96■■□□□ 1.43
RELA-206ENST00000525858 GRIN2BQ13224 1484 aa23.96■■□□□ 1.43
RELA-206ENST00000525858 TRHP20396 242 aaPredicted RBP23.95■■□□□ 1.42
RELA-206ENST00000525858 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
RELA-206ENST00000525858 FBLN2P98095 1184 aa23.88■■□□□ 1.41
RELA-206ENST00000525858 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
RELA-206ENST00000525858 ARHGEF11O15085 1522 aa23.85■■□□□ 1.41
RELA-206ENST00000525858 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
RELA-206ENST00000525858 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
RELA-206ENST00000525858 CYB5RLQ6IPT4 315 aa23.77■■□□□ 1.4
RELA-206ENST00000525858 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
RELA-206ENST00000525858 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
RELA-206ENST00000525858 CLASP1Q7Z460 1538 aa23.71■■□□□ 1.39
RELA-206ENST00000525858 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
RELA-206ENST00000525858 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
RELA-206ENST00000525858 IGF1RP08069 1367 aa23.64■■□□□ 1.37
RELA-206ENST00000525858 KIF27Q86VH2 1401 aa23.63■■□□□ 1.37
RELA-206ENST00000525858 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
RELA-206ENST00000525858 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
RELA-206ENST00000525858 NUP160Q12769 1436 aa23.59■■□□□ 1.37
RELA-206ENST00000525858 ARAP1Q96P48 1450 aa23.54■■□□□ 1.36
RELA-206ENST00000525858 CUL7Q14999 1698 aa23.48■■□□□ 1.35
RELA-206ENST00000525858 ERCC6L2Q5T890 1561 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms