RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 NISCHQ9Y2I1 1504 aa39.62■■■■□ 3.93
RELA-216ENST00000531238 CCDC180Q9P1Z9 1646 aa35.09■■■■□ 3.21
RELA-216ENST00000531238 ABCC9O60706 1549 aa34.6■■■■□ 3.13
RELA-216ENST00000531238 DCAF8L2P0C7V8 631 aa33.25■■■□□ 2.91
RELA-216ENST00000531238 RB1CC1Q8TDY2 1594 aa33.13■■■□□ 2.89
RELA-216ENST00000531238 NACADO15069 1562 aa33.09■■■□□ 2.89
RELA-216ENST00000531238 ZCCHC6Q5VYS8 1495 aaKnown RBP32.95■■■□□ 2.87
RELA-216ENST00000531238 MYO15BQ96JP2 1530 aa32.87■■■□□ 2.85
RELA-216ENST00000531238 DCAF1Q9Y4B6 1507 aa32.71■■■□□ 2.83
RELA-216ENST00000531238 PABPN1Q86U42 306 aaKnown RBP eCLIP32.45■■■□□ 2.79
RELA-216ENST00000531238 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
RELA-216ENST00000531238 BICRAQ9NZM4 1560 aa32.25■■■□□ 2.75
RELA-216ENST00000531238 SCRIBQ14160 1630 aa32.12■■■□□ 2.73
RELA-216ENST00000531238 DNAJC5BQ9UF47 199 aa32.05■■■□□ 2.72
RELA-216ENST00000531238 SHROOM4Q9ULL8 1493 aa31.72■■■□□ 2.67
RELA-216ENST00000531238 EIF4G1Q04637 1599 aaKnown RBP31.34■■■□□ 2.61
RELA-216ENST00000531238 CC2D2AQ9P2K1 1620 aa31.24■■■□□ 2.59
RELA-216ENST00000531238 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
RELA-216ENST00000531238 SMARCA4P51532 1647 aa30.7■■■□□ 2.51
RELA-216ENST00000531238 ATAD2BQ9ULI0 1458 aa30.63■■■□□ 2.49
RELA-216ENST00000531238 BAZ1AQ9NRL2 1556 aaPredicted RBP30.63■■■□□ 2.49
RELA-216ENST00000531238 NCAPD3P42695 1498 aa30.63■■■□□ 2.49
RELA-216ENST00000531238 MROH2BQ7Z745 1585 aa30.58■■■□□ 2.49
RELA-216ENST00000531238 SMARCA2P51531 1590 aa30.48■■■□□ 2.47
RELA-216ENST00000531238 PEG3Q9GZU2 1588 aa30.4■■■□□ 2.46
RELA-216ENST00000531238 HMGXB3Q12766 1538 aa30.36■■■□□ 2.45
RELA-216ENST00000531238 BAZ1BQ9UIG0 1483 aaKnown RBP30.31■■■□□ 2.44
RELA-216ENST00000531238 RSF1Q96T23 1441 aaPredicted RBP30.22■■■□□ 2.43
RELA-216ENST00000531238 WIZO95785 1651 aa30.2■■■□□ 2.43
RELA-216ENST00000531238 NESP48681 1621 aa29.96■■■□□ 2.39
RELA-216ENST00000531238 TOP2AP11388 1531 aaKnown RBP29.81■■■□□ 2.36
RELA-216ENST00000531238 CADPSQ9ULU8 1353 aa29.75■■■□□ 2.35
RELA-216ENST00000531238 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
RELA-216ENST00000531238 LAMC3Q9Y6N6 1575 aa29.73■■■□□ 2.35
RELA-216ENST00000531238 CCDC88BA6NC98 1476 aa29.58■■■□□ 2.33
RELA-216ENST00000531238 PDS5BQ9NTI5 1447 aa29.58■■■□□ 2.33
RELA-216ENST00000531238 CFTRP13569 1480 aa29.53■■■□□ 2.32
RELA-216ENST00000531238 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
RELA-216ENST00000531238 CUX2O14529 1486 aa29.45■■■□□ 2.31
RELA-216ENST00000531238 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
RELA-216ENST00000531238 THOC2Q8NI27 1593 aaKnown RBP29.4■■■□□ 2.3
RELA-216ENST00000531238 FANCD2Q9BXW9 1451 aa29.36■■■□□ 2.29
RELA-216ENST00000531238 CEP164Q9UPV0 1460 aa29.28■■■□□ 2.28
RELA-216ENST00000531238 MRC2Q9UBG0 1479 aa29.27■■■□□ 2.28
RELA-216ENST00000531238 WDR62O43379 1518 aa29.17■■■□□ 2.26
RELA-216ENST00000531238 URB2Q14146 1524 aaKnown RBP29.11■■■□□ 2.25
RELA-216ENST00000531238 PRDM2Q13029 1718 aa29.09■■■□□ 2.25
RELA-216ENST00000531238 TOPBP1Q92547 1522 aa28.89■■■□□ 2.21
RELA-216ENST00000531238 DNAJC5Q9H3Z4 198 aa28.81■■■□□ 2.2
RELA-216ENST00000531238 ABCC8Q09428 1581 aa28.8■■■□□ 2.2
RELA-216ENST00000531238 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
RELA-216ENST00000531238 IFT140Q96RY7 1462 aa28.69■■■□□ 2.18
RELA-216ENST00000531238 CUX1P39880 1505 aa28.67■■■□□ 2.18
RELA-216ENST00000531238 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
RELA-216ENST00000531238 POLA1P09884 1462 aaPredicted RBP28.64■■■□□ 2.17
RELA-216ENST00000531238 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
RELA-216ENST00000531238 TARBP1Q13395 1621 aaKnown RBP28.57■■■□□ 2.16
RELA-216ENST00000531238 SOGA1O94964 1423 aa28.56■■■□□ 2.16
RELA-216ENST00000531238 FGD5Q6ZNL6 1462 aa28.55■■■□□ 2.16
RELA-216ENST00000531238 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.151e-9■■■■■ 31.1
RELA-216ENST00000531238 TDRD9Q8NDG6 1382 aaKnown RBP28.45■■■□□ 2.14
RELA-216ENST00000531238 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
RELA-216ENST00000531238 EIF4G3O43432 1585 aaKnown RBP28.41■■■□□ 2.14
RELA-216ENST00000531238 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
RELA-216ENST00000531238 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
RELA-216ENST00000531238 TOP2BQ02880 1626 aa28.33■■■□□ 2.13
RELA-216ENST00000531238 BIVM-ERCC5R4GMW8 1640 aa28.3■■■□□ 2.12
RELA-216ENST00000531238 ABCA10Q8WWZ4 1543 aa28.26■■■□□ 2.11
RELA-216ENST00000531238 WDR97A6NE52 1622 aa28.24■■■□□ 2.11
RELA-216ENST00000531238 GAPVD1Q14C86 1478 aa28.19■■■□□ 2.1
RELA-216ENST00000531238 GRIN2BQ13224 1484 aa28.17■■■□□ 2.1
RELA-216ENST00000531238 FBLN2P98095 1184 aa28.17■■■□□ 2.1
RELA-216ENST00000531238 SNAPC4Q5SXM2 1469 aa28.16■■■□□ 2.1
RELA-216ENST00000531238 ABCA5Q8WWZ7 1642 aa28.11■■■□□ 2.09
RELA-216ENST00000531238 MAGI1Q96QZ7 1491 aaPredicted RBP28.07■■■□□ 2.08
RELA-216ENST00000531238 CHMP7Q8WUX9 453 aaPredicted RBP28.06■■■□□ 2.08
RELA-216ENST00000531238 CHD1O14646 1710 aa28.06■■■□□ 2.08
RELA-216ENST00000531238 PBRM1Q86U86 1689 aa28.02■■■□□ 2.08
RELA-216ENST00000531238 SYNJ2O15056 1496 aa27.99■■■□□ 2.07
RELA-216ENST00000531238 ERICH3Q5RHP9 1530 aa27.88■■■□□ 2.05
RELA-216ENST00000531238 FHAD1B1AJZ9 1412 aa27.85■■■□□ 2.05
RELA-216ENST00000531238 IGF1RP08069 1367 aa27.85■■■□□ 2.05
RELA-216ENST00000531238 ADAMTS12P58397 1594 aa27.84■■■□□ 2.05
RELA-216ENST00000531238 KIF27Q86VH2 1401 aa27.82■■■□□ 2.04
RELA-216ENST00000531238 CLASP1Q7Z460 1538 aa27.82■■■□□ 2.04
RELA-216ENST00000531238 TRIM41Q8WV44 630 aa27.81■■■□□ 2.04
RELA-216ENST00000531238 GRIN2AQ12879 1464 aa27.81■■■□□ 2.04
RELA-216ENST00000531238 RIMBP3CA6NJZ7 1639 aa27.81■■■□□ 2.04
RELA-216ENST00000531238 RIMBP3BA6NNM3 1639 aa27.81■■■□□ 2.04
RELA-216ENST00000531238 RIMBP3Q9UFD9 1639 aa27.81■■■□□ 2.04
RELA-216ENST00000531238 ARHGEF11O15085 1522 aa27.8■■■□□ 2.04
RELA-216ENST00000531238 NUP160Q12769 1436 aa27.72■■■□□ 2.03
RELA-216ENST00000531238 RUSC2Q8N2Y8 1516 aa27.7■■■□□ 2.02
RELA-216ENST00000531238 CEP170Q5SW79 1584 aa27.69■■■□□ 2.02
RELA-216ENST00000531238 CYB5RLQ6IPT4 315 aa27.67■■■□□ 2.02
RELA-216ENST00000531238 CARMIL1Q5VZK9 1371 aa27.62■■■□□ 2.01
RELA-216ENST00000531238 ARAP1Q96P48 1450 aa27.61■■■□□ 2.01
RELA-216ENST00000531238 CUL7Q14999 1698 aa27.54■■■□□ 2
RELA-216ENST00000531238 JPH4Q96JJ6 628 aa27.52■■■□□ 2
RELA-216ENST00000531238 ERCC6L2Q5T890 1561 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms