RNA–Protein interactions for RNA: ENST00000525658.5

RELA-204, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 808 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-204ENST00000525658 NISCHQ9Y2I1 1504 aa35.64■■■■□ 3.3
RELA-204ENST00000525658 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
RELA-204ENST00000525658 ABCC9O60706 1549 aa31.41■■■□□ 2.62
RELA-204ENST00000525658 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
RELA-204ENST00000525658 NACADO15069 1562 aa30■■■□□ 2.39
RELA-204ENST00000525658 DCAF8L2P0C7V8 631 aa29.96■■■□□ 2.39
RELA-204ENST00000525658 MYO15BQ96JP2 1530 aa29.73■■■□□ 2.35
RELA-204ENST00000525658 ZCCHC6Q5VYS8 1495 aaKnown RBP29.62■■■□□ 2.33
RELA-204ENST00000525658 DCAF1Q9Y4B6 1507 aa29.49■■■□□ 2.31
RELA-204ENST00000525658 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.29
RELA-204ENST00000525658 UNC13AQ9UPW8 1703 aa29.27■■■□□ 2.28
RELA-204ENST00000525658 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
RELA-204ENST00000525658 DNAJC5BQ9UF47 199 aa29.08■■■□□ 2.25
RELA-204ENST00000525658 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
RELA-204ENST00000525658 SHROOM4Q9ULL8 1493 aa28.9■■■□□ 2.22
RELA-204ENST00000525658 EIF4G1Q04637 1599 aaKnown RBP28.43■■■□□ 2.14
RELA-204ENST00000525658 CC2D2AQ9P2K1 1620 aa28.37■■■□□ 2.13
RELA-204ENST00000525658 CECR2Q9BXF3 1484 aa28.28■■■□□ 2.12
RELA-204ENST00000525658 NCAPD3P42695 1498 aa27.7■■■□□ 2.02
RELA-204ENST00000525658 SMARCA4P51532 1647 aa27.69■■■□□ 2.02
RELA-204ENST00000525658 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
RELA-204ENST00000525658 ATAD2BQ9ULI0 1458 aa27.65■■■□□ 2.02
RELA-204ENST00000525658 SMARCA2P51531 1590 aa27.61■■■□□ 2.01
RELA-204ENST00000525658 HMGXB3Q12766 1538 aa27.51■■□□□ 1.99
RELA-204ENST00000525658 MROH2BQ7Z745 1585 aa27.44■■□□□ 1.98
RELA-204ENST00000525658 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
RELA-204ENST00000525658 BAZ1BQ9UIG0 1483 aaKnown RBP27.42■■□□□ 1.98
RELA-204ENST00000525658 ERCC6Q03468 1493 aa27.14■■□□□ 1.94
RELA-204ENST00000525658 WIZO95785 1651 aa27.1■■□□□ 1.93
RELA-204ENST00000525658 NESP48681 1621 aa27.07■■□□□ 1.92
RELA-204ENST00000525658 RSF1Q96T23 1441 aaPredicted RBP27.06■■□□□ 1.92
RELA-204ENST00000525658 LAMC3Q9Y6N6 1575 aa26.98■■□□□ 1.91
RELA-204ENST00000525658 CUX2O14529 1486 aa26.94■■□□□ 1.9
RELA-204ENST00000525658 CADPSQ9ULU8 1353 aa26.89■■□□□ 1.9
RELA-204ENST00000525658 PDS5BQ9NTI5 1447 aa26.87■■□□□ 1.89
RELA-204ENST00000525658 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
RELA-204ENST00000525658 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
RELA-204ENST00000525658 KIF21AQ7Z4S6 1674 aa26.69■■□□□ 1.86
RELA-204ENST00000525658 CFTRP13569 1480 aa26.65■■□□□ 1.86
RELA-204ENST00000525658 MRC2Q9UBG0 1479 aa26.58■■□□□ 1.85
RELA-204ENST00000525658 FANCD2Q9BXW9 1451 aa26.56■■□□□ 1.84
RELA-204ENST00000525658 CEP164Q9UPV0 1460 aa26.56■■□□□ 1.84
RELA-204ENST00000525658 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
RELA-204ENST00000525658 WDR62O43379 1518 aa26.48■■□□□ 1.83
RELA-204ENST00000525658 DNAJC5Q9H3Z4 198 aa26.47■■□□□ 1.83
RELA-204ENST00000525658 PRDM2Q13029 1718 aa26.31■■□□□ 1.8
RELA-204ENST00000525658 URB2Q14146 1524 aaKnown RBP26.28■■□□□ 1.8
RELA-204ENST00000525658 SUPT5HO00267 1087 aaKnown RBP26.18■■□□□ 1.78
RELA-204ENST00000525658 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
RELA-204ENST00000525658 TOPBP1Q92547 1522 aa26.09■■□□□ 1.77
RELA-204ENST00000525658 IFT140Q96RY7 1462 aa26.03■■□□□ 1.76
RELA-204ENST00000525658 DNMBPQ6XZF7 1577 aa26.03■■□□□ 1.76
RELA-204ENST00000525658 ZNF608Q9ULD9 1512 aaPredicted RBP25.89■■□□□ 1.74
RELA-204ENST00000525658 POLA1P09884 1462 aaPredicted RBP25.85■■□□□ 1.73
RELA-204ENST00000525658 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
RELA-204ENST00000525658 TARBP1Q13395 1621 aaKnown RBP25.78■■□□□ 1.72
RELA-204ENST00000525658 SOGA1O94964 1423 aa25.77■■□□□ 1.72
RELA-204ENST00000525658 CUX1P39880 1505 aa25.77■■□□□ 1.72
RELA-204ENST00000525658 EIF4G3O43432 1585 aaKnown RBP25.76■■□□□ 1.71
RELA-204ENST00000525658 FGD5Q6ZNL6 1462 aa25.74■■□□□ 1.71
RELA-204ENST00000525658 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
RELA-204ENST00000525658 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.713e-8■■■■■ 30.2
RELA-204ENST00000525658 TDRD9Q8NDG6 1382 aaKnown RBP25.65■■□□□ 1.7
RELA-204ENST00000525658 WDR97A6NE52 1622 aa25.61■■□□□ 1.69
RELA-204ENST00000525658 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
RELA-204ENST00000525658 FBLN2P98095 1184 aa25.53■■□□□ 1.68
RELA-204ENST00000525658 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
RELA-204ENST00000525658 ABCA10Q8WWZ4 1543 aa25.49■■□□□ 1.67
RELA-204ENST00000525658 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
RELA-204ENST00000525658 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
RELA-204ENST00000525658 TOP2BQ02880 1626 aa25.47■■□□□ 1.67
RELA-204ENST00000525658 GAPVD1Q14C86 1478 aa25.46■■□□□ 1.67
RELA-204ENST00000525658 MAGI1Q96QZ7 1491 aaPredicted RBP25.46■■□□□ 1.67
RELA-204ENST00000525658 CHD1O14646 1710 aa25.44■■□□□ 1.66
RELA-204ENST00000525658 BIVM-ERCC5R4GMW8 1640 aa25.44■■□□□ 1.66
RELA-204ENST00000525658 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
RELA-204ENST00000525658 CHMP7Q8WUX9 453 aaPredicted RBP25.42■■□□□ 1.66
RELA-204ENST00000525658 SYNJ2O15056 1496 aa25.37■■□□□ 1.65
RELA-204ENST00000525658 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
RELA-204ENST00000525658 ARHGEF11O15085 1522 aa25.34■■□□□ 1.65
RELA-204ENST00000525658 RIMBP3CA6NJZ7 1639 aa25.33■■□□□ 1.65
RELA-204ENST00000525658 RIMBP3BA6NNM3 1639 aa25.33■■□□□ 1.65
RELA-204ENST00000525658 RIMBP3Q9UFD9 1639 aa25.33■■□□□ 1.65
RELA-204ENST00000525658 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
RELA-204ENST00000525658 CLASP1Q7Z460 1538 aa25.22■■□□□ 1.63
RELA-204ENST00000525658 ERICH3Q5RHP9 1530 aa25.18■■□□□ 1.62
RELA-204ENST00000525658 CYB5RLQ6IPT4 315 aa25.17■■□□□ 1.62
RELA-204ENST00000525658 FHAD1B1AJZ9 1412 aa25.17■■□□□ 1.62
RELA-204ENST00000525658 ADAMTS12P58397 1594 aa25.16■■□□□ 1.62
RELA-204ENST00000525658 GRIN2AQ12879 1464 aa25.15■■□□□ 1.62
RELA-204ENST00000525658 ARAP1Q96P48 1450 aa25.11■■□□□ 1.61
RELA-204ENST00000525658 NUP160Q12769 1436 aa25.06■■□□□ 1.6
RELA-204ENST00000525658 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
RELA-204ENST00000525658 CEP170Q5SW79 1584 aa25■■□□□ 1.59
RELA-204ENST00000525658 IGF1RP08069 1367 aa24.97■■□□□ 1.59
RELA-204ENST00000525658 CUL7Q14999 1698 aa24.87■■□□□ 1.57
RELA-204ENST00000525658 SHROOM2Q13796 1616 aa24.85■■□□□ 1.57
RELA-204ENST00000525658 JPH4Q96JJ6 628 aa24.83■■□□□ 1.57
RELA-204ENST00000525658 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
RELA-204ENST00000525658 ERCC6L2Q5T890 1561 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms