RNA–Protein interactions for RNA: ENST00000527074.5

RELA-210, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-210ENST00000527074 NISCHQ9Y2I1 1504 aa29.69■■■□□ 2.34
RELA-210ENST00000527074 ABCC9O60706 1549 aa28.59■■■□□ 2.17
RELA-210ENST00000527074 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
RELA-210ENST00000527074 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
RELA-210ENST00000527074 DNAJC5Q9H3Z4 198 aa26.61■■□□□ 1.85
RELA-210ENST00000527074 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
RELA-210ENST00000527074 PABPN1Q86U42 306 aaKnown RBP eCLIP26.3■■□□□ 1.8
RELA-210ENST00000527074 UNC13AQ9UPW8 1703 aa26.24■■□□□ 1.79
RELA-210ENST00000527074 NACADO15069 1562 aa26.05■■□□□ 1.76
RELA-210ENST00000527074 BICRAQ9NZM4 1560 aa26.01■■□□□ 1.75
RELA-210ENST00000527074 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
RELA-210ENST00000527074 CC2D2AQ9P2K1 1620 aa25.82■■□□□ 1.72
RELA-210ENST00000527074 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
RELA-210ENST00000527074 DCAF8L2P0C7V8 631 aa25.4■■□□□ 1.66
RELA-210ENST00000527074 SHROOM4Q9ULL8 1493 aa25.35■■□□□ 1.65
RELA-210ENST00000527074 MYO15BQ96JP2 1530 aa25.22■■□□□ 1.63
RELA-210ENST00000527074 CUX2O14529 1486 aa25.16■■□□□ 1.62
RELA-210ENST00000527074 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
RELA-210ENST00000527074 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
RELA-210ENST00000527074 ERCC6Q03468 1493 aa24.7■■□□□ 1.55
RELA-210ENST00000527074 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
RELA-210ENST00000527074 ZCCHC6Q5VYS8 1495 aaKnown RBP24.37■■□□□ 1.49
RELA-210ENST00000527074 THOC2Q8NI27 1593 aaKnown RBP24.34■■□□□ 1.49
RELA-210ENST00000527074 NESP48681 1621 aa24.23■■□□□ 1.47
RELA-210ENST00000527074 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
RELA-210ENST00000527074 SMARCA2P51531 1590 aa24.02■■□□□ 1.44
RELA-210ENST00000527074 KIF21AQ7Z4S6 1674 aa23.96■■□□□ 1.43
RELA-210ENST00000527074 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
RELA-210ENST00000527074 HMGXB3Q12766 1538 aa23.82■■□□□ 1.4
RELA-210ENST00000527074 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
RELA-210ENST00000527074 LAMC3Q9Y6N6 1575 aa23.77■■□□□ 1.4
RELA-210ENST00000527074 RIMBP3CA6NJZ7 1639 aa23.76■■□□□ 1.39
RELA-210ENST00000527074 RIMBP3BA6NNM3 1639 aa23.76■■□□□ 1.39
RELA-210ENST00000527074 RIMBP3Q9UFD9 1639 aa23.76■■□□□ 1.39
RELA-210ENST00000527074 AEBP2Q6ZN18 517 aaPredicted RBP23.62■■□□□ 1.37
RELA-210ENST00000527074 WDR62O43379 1518 aa23.61■■□□□ 1.37
RELA-210ENST00000527074 OSCARQ8IYS5 282 aa23.6■■□□□ 1.37
RELA-210ENST00000527074 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
RELA-210ENST00000527074 PDS5BQ9NTI5 1447 aa23.55■■□□□ 1.36
RELA-210ENST00000527074 SMARCA4P51532 1647 aa23.53■■□□□ 1.36
RELA-210ENST00000527074 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
RELA-210ENST00000527074 ARHGEF11O15085 1522 aa23.48■■□□□ 1.35
RELA-210ENST00000527074 TRHP20396 242 aaPredicted RBP23.33■■□□□ 1.33
RELA-210ENST00000527074 PEG3Q9GZU2 1588 aa23.29■■□□□ 1.32
RELA-210ENST00000527074 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
RELA-210ENST00000527074 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
RELA-210ENST00000527074 ARAP1Q96P48 1450 aa23.18■■□□□ 1.3
RELA-210ENST00000527074 CEP164Q9UPV0 1460 aa23.16■■□□□ 1.3
RELA-210ENST00000527074 ILDR1Q86SU0 546 aaPredicted RBP23.02■■□□□ 1.28
RELA-210ENST00000527074 FANCD2Q9BXW9 1451 aa23.01■■□□□ 1.27
RELA-210ENST00000527074 URB2Q14146 1524 aaKnown RBP22.99■■□□□ 1.27
RELA-210ENST00000527074 ZNF608Q9ULD9 1512 aaPredicted RBP22.93■■□□□ 1.26
RELA-210ENST00000527074 CHD1O14646 1710 aa22.93■■□□□ 1.26
RELA-210ENST00000527074 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
RELA-210ENST00000527074 RSF1Q96T23 1441 aaPredicted RBP22.81■■□□□ 1.24
RELA-210ENST00000527074 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
RELA-210ENST00000527074 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
RELA-210ENST00000527074 CFTRP13569 1480 aa22.71■■□□□ 1.23
RELA-210ENST00000527074 WIZO95785 1651 aa22.62■■□□□ 1.21
RELA-210ENST00000527074 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
RELA-210ENST00000527074 PRDM2Q13029 1718 aa22.57■■□□□ 1.2
RELA-210ENST00000527074 AQRO60306 1485 aaKnown RBP eCLIP22.47■■□□□ 1.191e-9■■■■■ 32.6
RELA-210ENST00000527074 TOPBP1Q92547 1522 aa22.47■■□□□ 1.19
RELA-210ENST00000527074 TARBP1Q13395 1621 aaKnown RBP22.45■■□□□ 1.18
RELA-210ENST00000527074 FBLN2P98095 1184 aa22.44■■□□□ 1.18
RELA-210ENST00000527074 KIF13AQ9H1H9 1805 aa22.38■■□□□ 1.17
RELA-210ENST00000527074 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.16
RELA-210ENST00000527074 SYNJ1O43426 1573 aa22.33■■□□□ 1.16
RELA-210ENST00000527074 KDM4FA0A1W2PPD8 638 aa22.31■■□□□ 1.16
RELA-210ENST00000527074 DNMBPQ6XZF7 1577 aa22.28■■□□□ 1.16
RELA-210ENST00000527074 SNAPC4Q5SXM2 1469 aa22.25■■□□□ 1.15
RELA-210ENST00000527074 TOP2AP11388 1531 aaKnown RBP22.18■■□□□ 1.14
RELA-210ENST00000527074 ERCC6L2Q5T890 1561 aa22.16■■□□□ 1.14
RELA-210ENST00000527074 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
RELA-210ENST00000527074 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
RELA-210ENST00000527074 HECW2Q9P2P5 1572 aa22.1■■□□□ 1.13
RELA-210ENST00000527074 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
RELA-210ENST00000527074 MAGI1Q96QZ7 1491 aaPredicted RBP22.08■■□□□ 1.12
RELA-210ENST00000527074 TDRD9Q8NDG6 1382 aaKnown RBP22.07■■□□□ 1.12
RELA-210ENST00000527074 SYNJ2O15056 1496 aa22.03■■□□□ 1.12
RELA-210ENST00000527074 WDR97A6NE52 1622 aa22.02■■□□□ 1.12
RELA-210ENST00000527074 KDM6BO15054 1643 aa22.02■■□□□ 1.12
RELA-210ENST00000527074 CHMP7Q8WUX9 453 aaPredicted RBP22.02■■□□□ 1.12
RELA-210ENST00000527074 PBRM1Q86U86 1689 aa21.93■■□□□ 1.1
RELA-210ENST00000527074 GRIN2BQ13224 1484 aa21.91■■□□□ 1.1
RELA-210ENST00000527074 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
RELA-210ENST00000527074 DIP2BQ9P265 1576 aa21.91■■□□□ 1.1
RELA-210ENST00000527074 ADGRL1O94910 1474 aa21.9■■□□□ 1.1
RELA-210ENST00000527074 SOGA1O94964 1423 aa21.89■■□□□ 1.1
RELA-210ENST00000527074 FBXO41Q8TF61 875 aa21.89■■□□□ 1.09
RELA-210ENST00000527074 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
RELA-210ENST00000527074 ABCC10Q5T3U5 1492 aa21.88■■□□□ 1.09
RELA-210ENST00000527074 TSPOAP1O95153 1857 aa21.83■■□□□ 1.09
RELA-210ENST00000527074 SHROOM2Q13796 1616 aa21.83■■□□□ 1.08
RELA-210ENST00000527074 LMTK3Q96Q04 1460 aa21.83■■□□□ 1.08
RELA-210ENST00000527074 FGD5Q6ZNL6 1462 aa21.81■■□□□ 1.08
RELA-210ENST00000527074 FAM69CQ0P6D2 419 aa21.79■■□□□ 1.08
RELA-210ENST00000527074 MAPKBP1O60336 1514 aa21.75■■□□□ 1.07
RELA-210ENST00000527074 GRIN2AQ12879 1464 aa21.68■■□□□ 1.06
RELA-210ENST00000527074 ABCA5Q8WWZ7 1642 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms