RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 NISCHQ9Y2I1 1504 aa36.01■■■■□ 3.35
SEMA3B-204ENST00000433753 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.55
SEMA3B-204ENST00000433753 CCDC180Q9P1Z9 1646 aa30.44■■■□□ 2.46
SEMA3B-204ENST00000433753 ZCCHC6Q5VYS8 1495 aaKnown RBP30.41■■■□□ 2.46
SEMA3B-204ENST00000433753 SUPT5HO00267 1087 aaKnown RBP30.4■■■□□ 2.46
SEMA3B-204ENST00000433753 DCAF8L2P0C7V8 631 aa30.24■■■□□ 2.43
SEMA3B-204ENST00000433753 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
SEMA3B-204ENST00000433753 DCAF1Q9Y4B6 1507 aa29.37■■■□□ 2.29
SEMA3B-204ENST00000433753 MYO15BQ96JP2 1530 aa29.32■■■□□ 2.28
SEMA3B-204ENST00000433753 SCRIBQ14160 1630 aa28.79■■■□□ 2.2
SEMA3B-204ENST00000433753 LOC105371045A0A1W2PR82 267 aa28.71■■■□□ 2.19
SEMA3B-204ENST00000433753 ABCC9O60706 1549 aa28.66■■■□□ 2.18
SEMA3B-204ENST00000433753 PCGF6Q9BYE7 350 aa28.6■■■□□ 2.17
SEMA3B-204ENST00000433753 RSF1Q96T23 1441 aaPredicted RBP28.56■■■□□ 2.16
SEMA3B-204ENST00000433753 HRCP23327 699 aa28.45■■■□□ 2.14
SEMA3B-204ENST00000433753 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
SEMA3B-204ENST00000433753 CECR2Q9BXF3 1484 aa28.23■■■□□ 2.11
SEMA3B-204ENST00000433753 NACADO15069 1562 aa28.22■■■□□ 2.11
SEMA3B-204ENST00000433753 TRIM41Q8WV44 630 aa28.21■■■□□ 2.11
SEMA3B-204ENST00000433753 FAM9AQ8IZU1 332 aaPredicted RBP28.15■■■□□ 2.1
SEMA3B-204ENST00000433753 MROH2BQ7Z745 1585 aa28.07■■■□□ 2.08
SEMA3B-204ENST00000433753 PPARGC1BQ86YN6 1023 aaKnown RBP28.07■■■□□ 2.08
SEMA3B-204ENST00000433753 EHMT2Q96KQ7 1210 aa28.04■■■□□ 2.08
SEMA3B-204ENST00000433753 WIZO95785 1651 aa27.93■■■□□ 2.06
SEMA3B-204ENST00000433753 TRIM26Q12899 539 aaPredicted RBP27.9■■■□□ 2.06
SEMA3B-204ENST00000433753 BAZ1AQ9NRL2 1556 aaPredicted RBP27.61■■■□□ 2.01
SEMA3B-204ENST00000433753 UNC13AQ9UPW8 1703 aa27.44■■□□□ 1.98
SEMA3B-204ENST00000433753 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.989e-8■■■■□ 19.4
SEMA3B-204ENST00000433753 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
SEMA3B-204ENST00000433753 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.98
SEMA3B-204ENST00000433753 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
SEMA3B-204ENST00000433753 TOP2AP11388 1531 aaKnown RBP27.36■■□□□ 1.97
SEMA3B-204ENST00000433753 ABCC8Q09428 1581 aa27.36■■□□□ 1.97
SEMA3B-204ENST00000433753 SMARCA2P51531 1590 aa27.26■■□□□ 1.95
SEMA3B-204ENST00000433753 ZEB1P37275 1124 aaPredicted RBP27.16■■□□□ 1.94
SEMA3B-204ENST00000433753 BICRAQ9NZM4 1560 aa27.12■■□□□ 1.93
SEMA3B-204ENST00000433753 SOGA1O94964 1423 aa27.12■■□□□ 1.93
SEMA3B-204ENST00000433753 TTBK1Q5TCY1 1321 aaPredicted RBP27.09■■□□□ 1.93
SEMA3B-204ENST00000433753 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
SEMA3B-204ENST00000433753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.97■■□□□ 1.91
SEMA3B-204ENST00000433753 CSRNP3Q8WYN3 585 aa26.93■■□□□ 1.9
SEMA3B-204ENST00000433753 UBTFP17480 764 aaKnown RBP26.92■■□□□ 1.9
SEMA3B-204ENST00000433753 CEP162Q5TB80 1403 aa26.91■■□□□ 1.9
SEMA3B-204ENST00000433753 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
SEMA3B-204ENST00000433753 CCER1Q8TC90 406 aaPredicted RBP26.81■■□□□ 1.88
SEMA3B-204ENST00000433753 TNIKQ9UKE5 1360 aa26.81■■□□□ 1.88
SEMA3B-204ENST00000433753 PEG3Q9GZU2 1588 aa26.78■■□□□ 1.88
SEMA3B-204ENST00000433753 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
SEMA3B-204ENST00000433753 EEA1Q15075 1411 aa26.73■■□□□ 1.87
SEMA3B-204ENST00000433753 SYNJ1O43426 1573 aa26.68■■□□□ 1.86
SEMA3B-204ENST00000433753 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
SEMA3B-204ENST00000433753 GOLGA3Q08378 1498 aa26.64■■□□□ 1.86
SEMA3B-204ENST00000433753 RANGAP1P46060 587 aaPredicted RBP26.57■■□□□ 1.84
SEMA3B-204ENST00000433753 CEP164Q9UPV0 1460 aa26.48■■□□□ 1.83
SEMA3B-204ENST00000433753 RAPGEF2Q9Y4G8 1499 aa26.41■■□□□ 1.82
SEMA3B-204ENST00000433753 CLIP1P30622 1438 aa26.41■■□□□ 1.82
SEMA3B-204ENST00000433753 KIF21BO75037 1637 aa26.38■■□□□ 1.81
SEMA3B-204ENST00000433753 HNRNPUL2Q1KMD3 747 aaKnown RBP26.36■■□□□ 1.81
SEMA3B-204ENST00000433753 TOP2BQ02880 1626 aa26.27■■□□□ 1.8
SEMA3B-204ENST00000433753 SCAF1Q9H7N4 1312 aaKnown RBP26.27■■□□□ 1.8
SEMA3B-204ENST00000433753 DIEXFQ68CQ4 756 aaKnown RBP26.24■■□□□ 1.79
SEMA3B-204ENST00000433753 VPS8Q8N3P4 1428 aa26.24■■□□□ 1.79
SEMA3B-204ENST00000433753 APLP2Q06481 763 aa26.23■■□□□ 1.79
SEMA3B-204ENST00000433753 NCAPD3P42695 1498 aa26.18■■□□□ 1.78
SEMA3B-204ENST00000433753 BIVM-ERCC5R4GMW8 1640 aa26.13■■□□□ 1.77
SEMA3B-204ENST00000433753 CUX1P39880 1505 aa26.11■■□□□ 1.77
SEMA3B-204ENST00000433753 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
SEMA3B-204ENST00000433753 PRXQ9BXM0 1461 aa26.06■■□□□ 1.76
SEMA3B-204ENST00000433753 NEUROD1Q13562 356 aa26.03■■□□□ 1.76
SEMA3B-204ENST00000433753 ZNF316A6NFI3 1004 aaPredicted RBP26.01■■□□□ 1.76
SEMA3B-204ENST00000433753 CFTRP13569 1480 aa26■■□□□ 1.75
SEMA3B-204ENST00000433753 KANK4Q5T7N3 995 aaPredicted RBP25.99■■□□□ 1.75
SEMA3B-204ENST00000433753 ACIN1Q9UKV3 1341 aaKnown RBP25.97■■□□□ 1.75
SEMA3B-204ENST00000433753 ARAP1Q96P48 1450 aa25.96■■□□□ 1.75
SEMA3B-204ENST00000433753 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
SEMA3B-204ENST00000433753 ERICH3Q5RHP9 1530 aa25.96■■□□□ 1.75
SEMA3B-204ENST00000433753 PELP1Q8IZL8 1130 aaKnown RBP25.89■■□□□ 1.74
SEMA3B-204ENST00000433753 CUX2O14529 1486 aa25.78■■□□□ 1.72
SEMA3B-204ENST00000433753 YTHDC1Q96MU7 727 aaKnown RBP25.76■■□□□ 1.71
SEMA3B-204ENST00000433753 ARHGAP35Q9NRY4 1499 aa25.76■■□□□ 1.71
SEMA3B-204ENST00000433753 CENPBP07199 599 aaPredicted RBP25.76■■□□□ 1.71
SEMA3B-204ENST00000433753 CADPSQ9ULU8 1353 aa25.75■■□□□ 1.71
SEMA3B-204ENST00000433753 IGF1RP08069 1367 aa25.75■■□□□ 1.71
SEMA3B-204ENST00000433753 GTF3C3Q9Y5Q9 886 aa25.75■■□□□ 1.71
SEMA3B-204ENST00000433753 MIER1Q8N108 512 aa25.74■■□□□ 1.71
SEMA3B-204ENST00000433753 ITGAEP38570 1179 aa25.73■■□□□ 1.71
SEMA3B-204ENST00000433753 DHX57Q6P158 1386 aaKnown RBP25.68■■□□□ 1.7
SEMA3B-204ENST00000433753 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
SEMA3B-204ENST00000433753 CARMIL1Q5VZK9 1371 aa25.64■■□□□ 1.69
SEMA3B-204ENST00000433753 PRDM2Q13029 1718 aa25.62■■□□□ 1.69
SEMA3B-204ENST00000433753 P3H3Q8IVL6 736 aa25.61■■□□□ 1.69
SEMA3B-204ENST00000433753 RRBP1Q9P2E9 1410 aaKnown RBP25.6■■□□□ 1.69
SEMA3B-204ENST00000433753 CC2D2AQ9P2K1 1620 aa25.6■■□□□ 1.69
SEMA3B-204ENST00000433753 CCNB3Q8WWL7 1395 aa25.58■■□□□ 1.68
SEMA3B-204ENST00000433753 ATP1B4Q9UN42 357 aaPredicted RBP25.53■■□□□ 1.68
SEMA3B-204ENST00000433753 FANCD2Q9BXW9 1451 aa25.51■■□□□ 1.67
SEMA3B-204ENST00000433753 CLSPNQ9HAW4 1339 aa25.49■■□□□ 1.67
SEMA3B-204ENST00000433753 RAD54L2Q9Y4B4 1467 aa25.49■■□□□ 1.67
SEMA3B-204ENST00000433753 NESP48681 1621 aa25.46■■□□□ 1.67
SEMA3B-204ENST00000433753 TIAM1Q13009 1591 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms