RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
HIPK3-203ENST00000456517 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
HIPK3-203ENST00000456517 EHMT2Q96KQ7 1210 aa23.3■■□□□ 1.32
HIPK3-203ENST00000456517 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.29
HIPK3-203ENST00000456517 PELP1Q8IZL8 1130 aaKnown RBP23.06■■□□□ 1.28
HIPK3-203ENST00000456517 APLP2Q06481 763 aa22.99■■□□□ 1.27
HIPK3-203ENST00000456517 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
HIPK3-203ENST00000456517 NISCHQ9Y2I1 1504 aa22.62■■□□□ 1.21
HIPK3-203ENST00000456517 TTBK1Q5TCY1 1321 aaPredicted RBP22.49■■□□□ 1.19
HIPK3-203ENST00000456517 RANGAP1P46060 587 aaPredicted RBP22.34■■□□□ 1.17
HIPK3-203ENST00000456517 ATP1B4Q9UN42 357 aaPredicted RBP22.3■■□□□ 1.16
HIPK3-203ENST00000456517 ERICH6Q7L0X2 663 aa22.18■■□□□ 1.14
HIPK3-203ENST00000456517 PCGF6Q9BYE7 350 aa22.15■■□□□ 1.14
HIPK3-203ENST00000456517 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
HIPK3-203ENST00000456517 CENPBP07199 599 aaPredicted RBP21.89■■□□□ 1.09
HIPK3-203ENST00000456517 TRIM41Q8WV44 630 aa21.87■■□□□ 1.09
HIPK3-203ENST00000456517 UBTFP17480 764 aaKnown RBP21.86■■□□□ 1.09
HIPK3-203ENST00000456517 NEFLP07196 543 aa21.71■■□□□ 1.07
HIPK3-203ENST00000456517 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
HIPK3-203ENST00000456517 ZEB1P37275 1124 aaPredicted RBP21.69■■□□□ 1.06
HIPK3-203ENST00000456517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.5■■□□□ 1.03
HIPK3-203ENST00000456517 HNRNPUL2Q1KMD3 747 aaKnown RBP21.5■■□□□ 1.03
HIPK3-203ENST00000456517 YTHDC1Q96MU7 727 aaKnown RBP21.49■■□□□ 1.03
HIPK3-203ENST00000456517 POLR3GLQ9BT43 218 aa21.41■■□□□ 1.02
HIPK3-203ENST00000456517 MYT1Q01538 1121 aa21.4■■□□□ 1.02
HIPK3-203ENST00000456517 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
HIPK3-203ENST00000456517 PPARGC1BQ86YN6 1023 aaKnown RBP21.33■■□□□ 1.01
HIPK3-203ENST00000456517 DAXXQ9UER7 740 aaPredicted RBP21.33■■□□□ 1
HIPK3-203ENST00000456517 ITGAEP38570 1179 aa21.29■■□□□ 1
HIPK3-203ENST00000456517 SLC4A1APQ9BWU0 796 aaKnown RBP21.21■□□□□ 0.99
HIPK3-203ENST00000456517 CNGB1Q14028 1251 aaPredicted RBP21.17■□□□□ 0.98
HIPK3-203ENST00000456517 TRIM26Q12899 539 aaPredicted RBP20.89■□□□□ 0.93
HIPK3-203ENST00000456517 CLSPNQ9HAW4 1339 aa20.86■□□□□ 0.93
HIPK3-203ENST00000456517 ZNF316A6NFI3 1004 aaPredicted RBP20.75■□□□□ 0.91
HIPK3-203ENST00000456517 FAM50AQ14320 339 aaKnown RBP20.67■□□□□ 0.9
HIPK3-203ENST00000456517 TRIM52Q96A61 297 aa20.66■□□□□ 0.9
HIPK3-203ENST00000456517 HRCP23327 699 aa20.62■□□□□ 0.89
HIPK3-203ENST00000456517 SLC24A1O60721 1099 aa20.59■□□□□ 0.89
HIPK3-203ENST00000456517 LOC105371045A0A1W2PR82 267 aa20.59■□□□□ 0.89
HIPK3-203ENST00000456517 RTL5Q5HYW3 569 aaPredicted RBP20.57■□□□□ 0.88
HIPK3-203ENST00000456517 ZBTB47Q9UFB7 747 aaPredicted RBP20.56■□□□□ 0.88
HIPK3-203ENST00000456517 BCANQ96GW7 911 aa20.52■□□□□ 0.88
HIPK3-203ENST00000456517 FBLN2P98095 1184 aa20.52■□□□□ 0.88
HIPK3-203ENST00000456517 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
HIPK3-203ENST00000456517 NEUROD1Q13562 356 aa20.46■□□□□ 0.87
HIPK3-203ENST00000456517 BCL11AQ9H165 835 aa20.42■□□□□ 0.86
HIPK3-203ENST00000456517 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.85
HIPK3-203ENST00000456517 NEFMP07197 916 aa20.35■□□□□ 0.85
HIPK3-203ENST00000456517 DIEXFQ68CQ4 756 aaKnown RBP20.31■□□□□ 0.84
HIPK3-203ENST00000456517 CANXP27824 592 aaKnown RBP20.31■□□□□ 0.84
HIPK3-203ENST00000456517 ANP32CO43423 234 aa20.23■□□□□ 0.83
HIPK3-203ENST00000456517 ESF1Q9H501 851 aaKnown RBP20.21■□□□□ 0.83
HIPK3-203ENST00000456517 ABCC9O60706 1549 aa20.18■□□□□ 0.82
HIPK3-203ENST00000456517 ARID3CA6NKF2 412 aa20.16■□□□□ 0.82
HIPK3-203ENST00000456517 PLPPR3Q6T4P5 718 aa20.12■□□□□ 0.81
HIPK3-203ENST00000456517 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
HIPK3-203ENST00000456517 ZNF777Q9ULD5 760 aaPredicted RBP20.08■□□□□ 0.81
HIPK3-203ENST00000456517 STAG3Q9UJ98 1225 aa20.06■□□□□ 0.8
HIPK3-203ENST00000456517 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
HIPK3-203ENST00000456517 CHGAP10645 457 aaKnown RBP19.99■□□□□ 0.79
HIPK3-203ENST00000456517 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
HIPK3-203ENST00000456517 HSP90AA1P07900 732 aaKnown RBP19.83■□□□□ 0.76
HIPK3-203ENST00000456517 ANP32AP39687 249 aaKnown RBP19.81■□□□□ 0.76
HIPK3-203ENST00000456517 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
HIPK3-203ENST00000456517 NPM2Q86SE8 214 aaKnown RBP19.79■□□□□ 0.76
HIPK3-203ENST00000456517 GTF3C3Q9Y5Q9 886 aa19.78■□□□□ 0.76
HIPK3-203ENST00000456517 ANP32BQ92688 251 aaKnown RBP19.76■□□□□ 0.75
HIPK3-203ENST00000456517 A0A0G2JS52 829 aa19.75■□□□□ 0.75
HIPK3-203ENST00000456517 UPF2Q9HAU5 1272 aaKnown RBP19.69■□□□□ 0.74
HIPK3-203ENST00000456517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.741e-6■□□□□ 11.1
HIPK3-203ENST00000456517 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.74
HIPK3-203ENST00000456517 TONSLQ96HA7 1378 aa19.63■□□□□ 0.73
HIPK3-203ENST00000456517 SALL2Q9Y467 1007 aaPredicted RBP19.62■□□□□ 0.73
HIPK3-203ENST00000456517 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
HIPK3-203ENST00000456517 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
HIPK3-203ENST00000456517 ZBTB7CA1YPR0 619 aa19.55■□□□□ 0.72
HIPK3-203ENST00000456517 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.52■□□□□ 0.71
HIPK3-203ENST00000456517 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
HIPK3-203ENST00000456517 CDK11BP21127 795 aaKnown RBP19.51■□□□□ 0.71
HIPK3-203ENST00000456517 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
HIPK3-203ENST00000456517 WDR43Q15061 677 aaKnown RBP eCLIP19.51■□□□□ 0.71
HIPK3-203ENST00000456517 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
HIPK3-203ENST00000456517 TMC1Q8TDI8 760 aa19.5■□□□□ 0.71
HIPK3-203ENST00000456517 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
HIPK3-203ENST00000456517 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
HIPK3-203ENST00000456517 KDM2AQ9Y2K7 1162 aa19.47■□□□□ 0.71
HIPK3-203ENST00000456517 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
HIPK3-203ENST00000456517 FKBP8Q14318 412 aa19.45■□□□□ 0.7
HIPK3-203ENST00000456517 PPP1R15AO75807 674 aaPredicted RBP19.43■□□□□ 0.7
HIPK3-203ENST00000456517 MYH16Q9H6N6 1097 aa19.43■□□□□ 0.7
HIPK3-203ENST00000456517 EIF5BO60841 1220 aaKnown RBP19.42■□□□□ 0.7
HIPK3-203ENST00000456517 HAP1P54257 671 aaPredicted RBP19.42■□□□□ 0.7
HIPK3-203ENST00000456517 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
HIPK3-203ENST00000456517 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
HIPK3-203ENST00000456517 CCDC136Q96JN2 1154 aa19.36■□□□□ 0.69
HIPK3-203ENST00000456517 ARXQ96QS3 562 aa19.34■□□□□ 0.69
HIPK3-203ENST00000456517 ARID4BQ4LE39 1312 aaPredicted RBP19.32■□□□□ 0.68
HIPK3-203ENST00000456517 ACIN1Q9UKV3 1341 aaKnown RBP19.31■□□□□ 0.68
HIPK3-203ENST00000456517 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
HIPK3-203ENST00000456517 SCRIBQ14160 1630 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms