RNA–Protein interactions for RNA: ENST00000525301.5

RELA-203, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 3

Gene RELA, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-203ENST00000525301 NISCHQ9Y2I1 1504 aa32.65■■■□□ 2.82
RELA-203ENST00000525301 CCDC180Q9P1Z9 1646 aa29.11■■■□□ 2.25
RELA-203ENST00000525301 ABCC9O60706 1549 aa28.74■■■□□ 2.19
RELA-203ENST00000525301 RB1CC1Q8TDY2 1594 aa27.51■■□□□ 1.99
RELA-203ENST00000525301 NACADO15069 1562 aa27.42■■□□□ 1.98
RELA-203ENST00000525301 DCAF8L2P0C7V8 631 aa27.36■■□□□ 1.97
RELA-203ENST00000525301 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
RELA-203ENST00000525301 MYO15BQ96JP2 1530 aa27.17■■□□□ 1.94
RELA-203ENST00000525301 DCAF1Q9Y4B6 1507 aa26.98■■□□□ 1.91
RELA-203ENST00000525301 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
RELA-203ENST00000525301 PABPN1Q86U42 306 aaKnown RBP eCLIP26.82■■□□□ 1.88
RELA-203ENST00000525301 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
RELA-203ENST00000525301 DNAJC5BQ9UF47 199 aa26.64■■□□□ 1.86
RELA-203ENST00000525301 SCRIBQ14160 1630 aa26.56■■□□□ 1.84
RELA-203ENST00000525301 SHROOM4Q9ULL8 1493 aa26.36■■□□□ 1.81
RELA-203ENST00000525301 EIF4G1Q04637 1599 aaKnown RBP26.03■■□□□ 1.76
RELA-203ENST00000525301 CC2D2AQ9P2K1 1620 aa25.98■■□□□ 1.75
RELA-203ENST00000525301 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
RELA-203ENST00000525301 SMARCA4P51532 1647 aa25.38■■□□□ 1.65
RELA-203ENST00000525301 NCAPD3P42695 1498 aa25.32■■□□□ 1.64
RELA-203ENST00000525301 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
RELA-203ENST00000525301 BAZ1AQ9NRL2 1556 aaPredicted RBP25.3■■□□□ 1.64
RELA-203ENST00000525301 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
RELA-203ENST00000525301 MROH2BQ7Z745 1585 aa25.18■■□□□ 1.62
RELA-203ENST00000525301 HMGXB3Q12766 1538 aa25.17■■□□□ 1.62
RELA-203ENST00000525301 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.61
RELA-203ENST00000525301 BAZ1BQ9UIG0 1483 aaKnown RBP25.07■■□□□ 1.6
RELA-203ENST00000525301 WIZO95785 1651 aa24.89■■□□□ 1.58
RELA-203ENST00000525301 RSF1Q96T23 1441 aaPredicted RBP24.88■■□□□ 1.57
RELA-203ENST00000525301 NESP48681 1621 aa24.82■■□□□ 1.56
RELA-203ENST00000525301 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
RELA-203ENST00000525301 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
RELA-203ENST00000525301 CUX2O14529 1486 aa24.58■■□□□ 1.53
RELA-203ENST00000525301 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.53
RELA-203ENST00000525301 CADPSQ9ULU8 1353 aa24.57■■□□□ 1.52
RELA-203ENST00000525301 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
RELA-203ENST00000525301 KIF21AQ7Z4S6 1674 aa24.51■■□□□ 1.51
RELA-203ENST00000525301 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
RELA-203ENST00000525301 THOC2Q8NI27 1593 aaKnown RBP24.48■■□□□ 1.51
RELA-203ENST00000525301 CFTRP13569 1480 aa24.38■■□□□ 1.49
RELA-203ENST00000525301 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
RELA-203ENST00000525301 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
RELA-203ENST00000525301 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
RELA-203ENST00000525301 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
RELA-203ENST00000525301 WDR62O43379 1518 aa24.22■■□□□ 1.47
RELA-203ENST00000525301 PRDM2Q13029 1718 aa24.16■■□□□ 1.46
RELA-203ENST00000525301 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
RELA-203ENST00000525301 URB2Q14146 1524 aaKnown RBP24.08■■□□□ 1.45
RELA-203ENST00000525301 TOPBP1Q92547 1522 aa23.88■■□□□ 1.41
RELA-203ENST00000525301 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
RELA-203ENST00000525301 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
RELA-203ENST00000525301 IFT140Q96RY7 1462 aa23.76■■□□□ 1.39
RELA-203ENST00000525301 ZNF608Q9ULD9 1512 aaPredicted RBP23.72■■□□□ 1.39
RELA-203ENST00000525301 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
RELA-203ENST00000525301 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
RELA-203ENST00000525301 CUX1P39880 1505 aa23.63■■□□□ 1.37
RELA-203ENST00000525301 EIF4G3O43432 1585 aaKnown RBP23.6■■□□□ 1.37
RELA-203ENST00000525301 RAD54L2Q9Y4B4 1467 aa23.58■■□□□ 1.37
RELA-203ENST00000525301 FGD5Q6ZNL6 1462 aa23.57■■□□□ 1.36
RELA-203ENST00000525301 SOGA1O94964 1423 aa23.55■■□□□ 1.36
RELA-203ENST00000525301 AQRO60306 1485 aaKnown RBP eCLIP23.55■■□□□ 1.361e-9■■■■■ 34.9
RELA-203ENST00000525301 OSCARQ8IYS5 282 aa23.53■■□□□ 1.36
RELA-203ENST00000525301 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
RELA-203ENST00000525301 SYNJ1O43426 1573 aa23.43■■□□□ 1.34
RELA-203ENST00000525301 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
RELA-203ENST00000525301 WDR97A6NE52 1622 aa23.4■■□□□ 1.34
RELA-203ENST00000525301 BIVM-ERCC5R4GMW8 1640 aa23.4■■□□□ 1.34
RELA-203ENST00000525301 TOP2BQ02880 1626 aa23.37■■□□□ 1.33
RELA-203ENST00000525301 CHD1O14646 1710 aa23.35■■□□□ 1.33
RELA-203ENST00000525301 ABCA10Q8WWZ4 1543 aa23.32■■□□□ 1.32
RELA-203ENST00000525301 SNAPC4Q5SXM2 1469 aa23.31■■□□□ 1.32
RELA-203ENST00000525301 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
RELA-203ENST00000525301 FBLN2P98095 1184 aa23.29■■□□□ 1.32
RELA-203ENST00000525301 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
RELA-203ENST00000525301 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
RELA-203ENST00000525301 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
RELA-203ENST00000525301 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
RELA-203ENST00000525301 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
RELA-203ENST00000525301 RIMBP3CA6NJZ7 1639 aa23.2■■□□□ 1.3
RELA-203ENST00000525301 RIMBP3BA6NNM3 1639 aa23.2■■□□□ 1.3
RELA-203ENST00000525301 RIMBP3Q9UFD9 1639 aa23.2■■□□□ 1.3
RELA-203ENST00000525301 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
RELA-203ENST00000525301 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
RELA-203ENST00000525301 ARHGEF11O15085 1522 aa23.17■■□□□ 1.3
RELA-203ENST00000525301 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
RELA-203ENST00000525301 CLASP1Q7Z460 1538 aa23.09■■□□□ 1.29
RELA-203ENST00000525301 ADAMTS12P58397 1594 aa23.05■■□□□ 1.28
RELA-203ENST00000525301 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
RELA-203ENST00000525301 GRIN2AQ12879 1464 aa23■■□□□ 1.27
RELA-203ENST00000525301 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
RELA-203ENST00000525301 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
RELA-203ENST00000525301 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
RELA-203ENST00000525301 NUP160Q12769 1436 aa22.92■■□□□ 1.26
RELA-203ENST00000525301 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
RELA-203ENST00000525301 CEP170Q5SW79 1584 aa22.92■■□□□ 1.26
RELA-203ENST00000525301 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
RELA-203ENST00000525301 IGF1RP08069 1367 aa22.85■■□□□ 1.25
RELA-203ENST00000525301 EEA1Q15075 1411 aa22.79■■□□□ 1.24
RELA-203ENST00000525301 ERCC6L2Q5T890 1561 aa22.79■■□□□ 1.24
RELA-203ENST00000525301 SHROOM2Q13796 1616 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms